Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 CEP170P1-201ENST00000502249 4587 ntBASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HCFC2Q9Y5Z7 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HCFC2Q9Y5Z7 AL109809.4-201ENST00000603520 2185 ntBASIC3.61□□□□□ -1.83
HCFC2Q9Y5Z7 RNU5F-3P-201ENST00000363767 117 ntBASIC3.61□□□□□ -1.83
HCFC2Q9Y5Z7 Y_RNA.240-201ENST00000364469 95 ntBASIC3.61□□□□□ -1.83
HCFC2Q9Y5Z7 RNU6-1141P-201ENST00000364520 107 ntBASIC3.61□□□□□ -1.83
HCFC2Q9Y5Z7 Y_RNA.291-201ENST00000364886 113 ntBASIC3.61□□□□□ -1.83
HCFC2Q9Y5Z7 RNU1-100P-201ENST00000365255 165 ntBASIC3.61□□□□□ -1.83
HCFC2Q9Y5Z7 MIR1183-201ENST00000408856 89 ntBASIC3.61□□□□□ -1.83
HCFC2Q9Y5Z7 Y_RNA.590-201ENST00000410140 107 ntBASIC3.61□□□□□ -1.83
HCFC2Q9Y5Z7 RNU4-30P-201ENST00000410245 143 ntBASIC3.61□□□□□ -1.83
HCFC2Q9Y5Z7 NDUFS5P4-201ENST00000412983 318 ntBASIC3.61□□□□□ -1.83
HCFC2Q9Y5Z7 RPS26P42-201ENST00000413485 326 ntBASIC3.61□□□□□ -1.83
HCFC2Q9Y5Z7 HMGN2P30-201ENST00000423237 256 ntBASIC3.61□□□□□ -1.83
HCFC2Q9Y5Z7 Y_RNA.638-201ENST00000459374 113 ntBASIC3.61□□□□□ -1.83
HCFC2Q9Y5Z7 AC109925.1-201ENST00000478069 331 ntBASIC3.61□□□□□ -1.83
HCFC2Q9Y5Z7 AC016632.1-201ENST00000503994 196 ntBASIC3.61□□□□□ -1.83
HCFC2Q9Y5Z7 Y_RNA.662-201ENST00000516028 97 ntBASIC3.61□□□□□ -1.83
HCFC2Q9Y5Z7 SNORD116-28-201ENST00000516123 91 ntBASIC3.61□□□□□ -1.83
HCFC2Q9Y5Z7 Vault.1-201ENST00000516474 102 ntBASIC3.61□□□□□ -1.83
HCFC2Q9Y5Z7 SNORA27.4-201ENST00000516650 95 ntBASIC3.61□□□□□ -1.83
HCFC2Q9Y5Z7 RNU7-110P-201ENST00000516891 62 ntBASIC3.61□□□□□ -1.83
HCFC2Q9Y5Z7 RNU6-58P-201ENST00000517143 103 ntBASIC3.61□□□□□ -1.83
HCFC2Q9Y5Z7 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.61□□□□□ -1.83
HCFC2Q9Y5Z7 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.61□□□□□ -1.83
HCFC2Q9Y5Z7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.61□□□□□ -1.83
HCFC2Q9Y5Z7 LARP7P3-201ENST00000579888 337 ntBASIC3.61□□□□□ -1.83
HCFC2Q9Y5Z7 AL162274.2-201ENST00000614406 332 ntBASIC3.61□□□□□ -1.83
HCFC2Q9Y5Z7 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.61□□□□□ -1.83
HCFC2Q9Y5Z7 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HCFC2Q9Y5Z7 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HCFC2Q9Y5Z7 AL356274.2-201ENST00000624379 3752 ntBASIC3.61□□□□□ -1.83
HCFC2Q9Y5Z7 HAUS6P2-201ENST00000433254 2404 ntBASIC3.61□□□□□ -1.83
HCFC2Q9Y5Z7 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 AC090740.1-201ENST00000623193 2262 ntBASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 RNU6-626P-201ENST00000363354 107 ntBASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 RNA5SP240-201ENST00000365355 128 ntBASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 RNU6-47P-201ENST00000383866 107 ntBASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 RNU6-514P-201ENST00000384208 107 ntBASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 SNORD116-20-201ENST00000384529 92 ntBASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 MIR607-201ENST00000385241 96 ntBASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 MIR325-201ENST00000385260 98 ntBASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 RPL21P66-201ENST00000426566 466 ntBASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 AC078809.1-201ENST00000427601 140 ntBASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 RPL27AP5-201ENST00000469428 449 ntBASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 AC084357.1-201ENST00000473404 255 ntBASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 SNORA40.9-201ENST00000515895 93 ntBASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 RNA5SP341-201ENST00000516261 117 ntBASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 RNA5SP309-201ENST00000516670 106 ntBASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 CYCSP23-201ENST00000519781 313 ntBASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 CKS1BP7-201ENST00000522230 235 ntBASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 AL451007.1-201ENST00000595491 289 ntBASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 AL713866.2-201ENST00000603579 219 ntBASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 AC019159.1-201ENST00000605094 187 ntBASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 AL365361.1-201ENST00000566942 3481 ntBASIC3.6□□□□□ -1.83
HCFC2Q9Y5Z7 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HCFC2Q9Y5Z7 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HCFC2Q9Y5Z7 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HCFC2Q9Y5Z7 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HCFC2Q9Y5Z7 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
HCFC2Q9Y5Z7 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.59□□□□□ -1.83
HCFC2Q9Y5Z7 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.59□□□□□ -1.83
HCFC2Q9Y5Z7 RNA5SP432-201ENST00000362480 116 ntBASIC3.59□□□□□ -1.83
HCFC2Q9Y5Z7 Y_RNA.170-201ENST00000363746 110 ntBASIC3.59□□□□□ -1.83
HCFC2Q9Y5Z7 Y_RNA.233-201ENST00000364407 101 ntBASIC3.59□□□□□ -1.83
HCFC2Q9Y5Z7 RNU6-20P-201ENST00000384106 107 ntBASIC3.59□□□□□ -1.83
HCFC2Q9Y5Z7 MIR613-201ENST00000385248 95 ntBASIC3.59□□□□□ -1.83
HCFC2Q9Y5Z7 SNORA26.3-201ENST00000391119 136 ntBASIC3.59□□□□□ -1.83
HCFC2Q9Y5Z7 RPL23AP36-201ENST00000413895 458 ntBASIC3.59□□□□□ -1.83
HCFC2Q9Y5Z7 RPS29P31-201ENST00000446147 164 ntBASIC3.59□□□□□ -1.83
HCFC2Q9Y5Z7 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.59□□□□□ -1.83
HCFC2Q9Y5Z7 AC125238.1-201ENST00000448842 249 ntBASIC3.59□□□□□ -1.83
HCFC2Q9Y5Z7 HMGB3P8-201ENST00000449709 577 ntBASIC3.59□□□□□ -1.83
HCFC2Q9Y5Z7 RPL21P104-201ENST00000464143 478 ntBASIC3.59□□□□□ -1.83
HCFC2Q9Y5Z7 AC091959.1-201ENST00000495857 238 ntBASIC3.59□□□□□ -1.83
HCFC2Q9Y5Z7 RNU6-1278P-201ENST00000516130 107 ntBASIC3.59□□□□□ -1.83
HCFC2Q9Y5Z7 RNA5SP54-201ENST00000516951 92 ntBASIC3.59□□□□□ -1.83
HCFC2Q9Y5Z7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.59□□□□□ -1.83
HCFC2Q9Y5Z7 AL391261.3-201ENST00000557194 520 ntBASIC3.59□□□□□ -1.83
HCFC2Q9Y5Z7 KLKP1-201ENST00000595979 403 ntBASIC3.59□□□□□ -1.83
HCFC2Q9Y5Z7 AC006386.2-201ENST00000624491 75 ntBASIC3.59□□□□□ -1.83
HCFC2Q9Y5Z7 AC012005.1-201ENST00000624575 75 ntBASIC3.59□□□□□ -1.83
HCFC2Q9Y5Z7 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
HCFC2Q9Y5Z7 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.59□□□□□ -1.84
HCFC2Q9Y5Z7 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
HCFC2Q9Y5Z7 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms