Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 Y_RNA.322-201ENST00000365151 102 ntBASIC3.52□□□□□ -1.85
SIT1Q9Y3P8 RN7SKP284-201ENST00000411002 343 ntBASIC3.52□□□□□ -1.85
SIT1Q9Y3P8 Y_RNA.626-201ENST00000411288 95 ntBASIC3.52□□□□□ -1.85
SIT1Q9Y3P8 AC244670.1-201ENST00000436879 112 ntBASIC3.52□□□□□ -1.85
SIT1Q9Y3P8 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.52□□□□□ -1.85
SIT1Q9Y3P8 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.52□□□□□ -1.85
SIT1Q9Y3P8 AC007395.1-201ENST00000451333 677 ntBASIC3.52□□□□□ -1.85
SIT1Q9Y3P8 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.52□□□□□ -1.85
SIT1Q9Y3P8 Y_RNA.650-201ENST00000459002 102 ntBASIC3.52□□□□□ -1.85
SIT1Q9Y3P8 RPS29P20-201ENST00000489592 171 ntBASIC3.52□□□□□ -1.85
SIT1Q9Y3P8 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.52□□□□□ -1.85
SIT1Q9Y3P8 RNU1-61P-201ENST00000516107 151 ntBASIC3.52□□□□□ -1.85
SIT1Q9Y3P8 RNU6-928P-201ENST00000516876 104 ntBASIC3.52□□□□□ -1.85
SIT1Q9Y3P8 RNU7-110P-201ENST00000516891 62 ntBASIC3.52□□□□□ -1.85
SIT1Q9Y3P8 Y_RNA.777-201ENST00000516982 102 ntBASIC3.52□□□□□ -1.85
SIT1Q9Y3P8 CYCSP23-201ENST00000519781 313 ntBASIC3.52□□□□□ -1.85
SIT1Q9Y3P8 AP002392.1-201ENST00000537692 208 ntBASIC3.52□□□□□ -1.85
SIT1Q9Y3P8 AC006199.1-201ENST00000548728 219 ntBASIC3.52□□□□□ -1.85
SIT1Q9Y3P8 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.52□□□□□ -1.85
SIT1Q9Y3P8 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.52□□□□□ -1.85
SIT1Q9Y3P8 Y_RNA.771-201ENST00000598668 102 ntBASIC3.52□□□□□ -1.85
SIT1Q9Y3P8 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.52□□□□□ -1.85
SIT1Q9Y3P8 Y_RNA.789-201ENST00000622480 102 ntBASIC3.52□□□□□ -1.85
SIT1Q9Y3P8 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.52□□□□□ -1.85
SIT1Q9Y3P8 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SIT1Q9Y3P8 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SIT1Q9Y3P8 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.52□□□□□ -1.85
SIT1Q9Y3P8 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.52□□□□□ -1.85
SIT1Q9Y3P8 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SIT1Q9Y3P8 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SIT1Q9Y3P8 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SIT1Q9Y3P8 RNU6-20P-201ENST00000384106 107 ntBASIC3.51□□□□□ -1.85
SIT1Q9Y3P8 SNORA1.3-201ENST00000384676 136 ntBASIC3.51□□□□□ -1.85
SIT1Q9Y3P8 RNU4-30P-201ENST00000410245 143 ntBASIC3.51□□□□□ -1.85
SIT1Q9Y3P8 RNU4-47P-201ENST00000410876 114 ntBASIC3.51□□□□□ -1.85
SIT1Q9Y3P8 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.51□□□□□ -1.85
SIT1Q9Y3P8 AC012306.1-201ENST00000423267 114 ntBASIC3.51□□□□□ -1.85
SIT1Q9Y3P8 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.51□□□□□ -1.85
SIT1Q9Y3P8 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.51□□□□□ -1.85
SIT1Q9Y3P8 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SIT1Q9Y3P8 AP000705.1-201ENST00000454567 350 ntBASIC3.51□□□□□ -1.85
SIT1Q9Y3P8 AC007215.1-201ENST00000464893 276 ntBASIC3.51□□□□□ -1.85
SIT1Q9Y3P8 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.51□□□□□ -1.85
SIT1Q9Y3P8 SNORA40.9-201ENST00000515895 93 ntBASIC3.51□□□□□ -1.85
SIT1Q9Y3P8 RNU5F-8P-201ENST00000515941 111 ntBASIC3.51□□□□□ -1.85
SIT1Q9Y3P8 RNU6-581P-201ENST00000516214 105 ntBASIC3.51□□□□□ -1.85
SIT1Q9Y3P8 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.51□□□□□ -1.85
SIT1Q9Y3P8 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.51□□□□□ -1.85
SIT1Q9Y3P8 AC011921.3-201ENST00000605540 361 ntBASIC3.51□□□□□ -1.85
SIT1Q9Y3P8 AL359198.2-201ENST00000611836 194 ntBASIC3.51□□□□□ -1.85
SIT1Q9Y3P8 MIR7154-201ENST00000620673 73 ntBASIC3.51□□□□□ -1.85
SIT1Q9Y3P8 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.51□□□□□ -1.85
SIT1Q9Y3P8 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SIT1Q9Y3P8 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 MIR410-201ENST00000362222 80 ntBASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 SNORA25.1-201ENST00000362326 128 ntBASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 SNORA5B-201ENST00000363786 132 ntBASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 RNU6-961P-201ENST00000363893 105 ntBASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 Y_RNA.292-201ENST00000364904 97 ntBASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 SNORA36A-201ENST00000384221 132 ntBASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 RNU6-301P-201ENST00000384277 107 ntBASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 CYCSP48-201ENST00000417124 323 ntBASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 AC112220.1-201ENST00000434628 355 ntBASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 RPL39P29-201ENST00000447779 157 ntBASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 HMGN2P16-201ENST00000456802 261 ntBASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 AC074133.1-201ENST00000515696 183 ntBASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 ACA59.2-201ENST00000517061 156 ntBASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 AC115990.1-201ENST00000526957 301 ntBASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 AC233702.2-202ENST00000562547 291 ntBASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 MIR3609-201ENST00000582661 80 ntBASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 AL356575.1-201ENST00000603008 283 ntBASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 MIR7106-201ENST00000612419 65 ntBASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 AL590240.4-201ENST00000616908 390 ntBASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 OTUD4P1-201ENST00000237841 3067 ntBASIC3.5□□□□□ -1.85
SIT1Q9Y3P8 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
SIT1Q9Y3P8 AC002546.1-201ENST00000588041 2504 ntBASIC3.49□□□□□ -1.85
SIT1Q9Y3P8 AC002543.1-201ENST00000299783 1954 ntBASIC3.49□□□□□ -1.85
SIT1Q9Y3P8 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.49□□□□□ -1.85
SIT1Q9Y3P8 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
SIT1Q9Y3P8 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SIT1Q9Y3P8 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.49□□□□□ -1.85
SIT1Q9Y3P8 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SIT1Q9Y3P8 RNA5SP502-201ENST00000362694 119 ntBASIC3.49□□□□□ -1.85
SIT1Q9Y3P8 RNU6-682P-201ENST00000363843 106 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms