Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 AL136363.2-201ENST00000604173 851 ntBASIC1.93□□□□□ -2.1
SMC3Q9UQE7 AC068944.2-201ENST00000610373 403 ntBASIC1.93□□□□□ -2.1
SMC3Q9UQE7 AL132822.1-201ENST00000617063 513 ntBASIC1.93□□□□□ -2.1
SMC3Q9UQE7 Z69720.2-201ENST00000624755 279 ntBASIC1.93□□□□□ -2.1
SMC3Q9UQE7 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.93□□□□□ -2.1
SMC3Q9UQE7 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SMC3Q9UQE7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SMC3Q9UQE7 RNU6-1120P-201ENST00000362988 108 ntBASIC1.92□□□□□ -2.1
SMC3Q9UQE7 RNU6-527P-201ENST00000363425 104 ntBASIC1.92□□□□□ -2.1
SMC3Q9UQE7 Y_RNA.324-201ENST00000365165 102 ntBASIC1.92□□□□□ -2.1
SMC3Q9UQE7 RNU6-996P-201ENST00000365438 107 ntBASIC1.92□□□□□ -2.1
SMC3Q9UQE7 RNU6-1274P-201ENST00000384557 107 ntBASIC1.92□□□□□ -2.1
SMC3Q9UQE7 RNA5SP465-201ENST00000391195 109 ntBASIC1.92□□□□□ -2.1
SMC3Q9UQE7 MTCO1P21-201ENST00000416634 589 ntBASIC1.92□□□□□ -2.1
SMC3Q9UQE7 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.92□□□□□ -2.1
SMC3Q9UQE7 RNU7-180P-201ENST00000459240 63 ntBASIC1.92□□□□□ -2.1
SMC3Q9UQE7 GMFBP1-201ENST00000467831 427 ntBASIC1.92□□□□□ -2.1
SMC3Q9UQE7 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.92□□□□□ -2.1
SMC3Q9UQE7 AC104564.1-201ENST00000493028 407 ntBASIC1.92□□□□□ -2.1
SMC3Q9UQE7 AC079382.1-201ENST00000493346 557 ntBASIC1.92□□□□□ -2.1
SMC3Q9UQE7 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.92□□□□□ -2.1
SMC3Q9UQE7 AC024909.2-201ENST00000553035 286 ntBASIC1.92□□□□□ -2.1
SMC3Q9UQE7 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.92□□□□□ -2.1
SMC3Q9UQE7 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.92□□□□□ -2.1
SMC3Q9UQE7 MIR8081-201ENST00000611533 95 ntBASIC1.92□□□□□ -2.1
SMC3Q9UQE7 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.92□□□□□ -2.1
SMC3Q9UQE7 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.91□□□□□ -2.1
SMC3Q9UQE7 Y_RNA.3-201ENST00000362331 103 ntBASIC1.91□□□□□ -2.1
SMC3Q9UQE7 Y_RNA.378-201ENST00000365652 113 ntBASIC1.91□□□□□ -2.1
SMC3Q9UQE7 RNU5A-6P-201ENST00000384136 116 ntBASIC1.91□□□□□ -2.1
SMC3Q9UQE7 RNU6-1103P-201ENST00000384150 107 ntBASIC1.91□□□□□ -2.1
SMC3Q9UQE7 RNU6-997P-201ENST00000384725 107 ntBASIC1.91□□□□□ -2.1
SMC3Q9UQE7 MIR1262-201ENST00000408276 93 ntBASIC1.91□□□□□ -2.1
SMC3Q9UQE7 RNU6-1068P-201ENST00000410958 103 ntBASIC1.91□□□□□ -2.1
SMC3Q9UQE7 RNU2-32P-201ENST00000411193 191 ntBASIC1.91□□□□□ -2.1
SMC3Q9UQE7 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.91□□□□□ -2.1
SMC3Q9UQE7 USP9YP18-201ENST00000425912 695 ntBASIC1.91□□□□□ -2.1
SMC3Q9UQE7 AL121601.2-201ENST00000438019 707 ntBASIC1.91□□□□□ -2.1
SMC3Q9UQE7 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.91□□□□□ -2.1
SMC3Q9UQE7 PRPS1P1-201ENST00000445305 876 ntBASIC1.91□□□□□ -2.1
SMC3Q9UQE7 snoU13.15-201ENST00000459407 104 ntBASIC1.91□□□□□ -2.1
SMC3Q9UQE7 AC009646.1-201ENST00000510455 318 ntBASIC1.91□□□□□ -2.1
SMC3Q9UQE7 RN7SKP256-201ENST00000517201 314 ntBASIC1.91□□□□□ -2.1
SMC3Q9UQE7 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.91□□□□□ -2.1
SMC3Q9UQE7 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.91□□□□□ -2.1
SMC3Q9UQE7 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.91□□□□□ -2.1
SMC3Q9UQE7 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.91□□□□□ -2.1
SMC3Q9UQE7 U4.7-201ENST00000638126 106 ntBASIC1.91□□□□□ -2.1
SMC3Q9UQE7 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
SMC3Q9UQE7 RNU6-546P-201ENST00000383991 107 ntBASIC1.9□□□□□ -2.11
SMC3Q9UQE7 RNU6-483P-201ENST00000384088 108 ntBASIC1.9□□□□□ -2.11
SMC3Q9UQE7 RNU6-393P-201ENST00000384475 107 ntBASIC1.9□□□□□ -2.11
SMC3Q9UQE7 MTCO3P40-201ENST00000392516 676 ntBASIC1.9□□□□□ -2.11
SMC3Q9UQE7 RN7SKP101-201ENST00000411376 320 ntBASIC1.9□□□□□ -2.11
SMC3Q9UQE7 MTCO3P41-201ENST00000414801 328 ntBASIC1.9□□□□□ -2.11
SMC3Q9UQE7 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SMC3Q9UQE7 EIF4EP2-201ENST00000422816 654 ntBASIC1.9□□□□□ -2.11
SMC3Q9UQE7 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SMC3Q9UQE7 AC007969.2-201ENST00000441891 191 ntBASIC1.9□□□□□ -2.11
SMC3Q9UQE7 RPL39P29-201ENST00000447779 157 ntBASIC1.9□□□□□ -2.11
SMC3Q9UQE7 RNU6-261P-201ENST00000459506 102 ntBASIC1.9□□□□□ -2.11
SMC3Q9UQE7 SNRPGP7-201ENST00000469016 106 ntBASIC1.9□□□□□ -2.11
SMC3Q9UQE7 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.9□□□□□ -2.11
SMC3Q9UQE7 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.9□□□□□ -2.11
SMC3Q9UQE7 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
SMC3Q9UQE7 AC079140.5-201ENST00000507882 310 ntBASIC1.9□□□□□ -2.11
SMC3Q9UQE7 AC105313.1-201ENST00000509121 353 ntBASIC1.9□□□□□ -2.11
SMC3Q9UQE7 RNU6-250P-201ENST00000516958 103 ntBASIC1.9□□□□□ -2.11
SMC3Q9UQE7 SNORA25.17-201ENST00000517184 124 ntBASIC1.9□□□□□ -2.11
SMC3Q9UQE7 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.9□□□□□ -2.11
SMC3Q9UQE7 AC016957.1-201ENST00000534895 309 ntBASIC1.9□□□□□ -2.11
SMC3Q9UQE7 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.9□□□□□ -2.11
SMC3Q9UQE7 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.9□□□□□ -2.11
SMC3Q9UQE7 AC012507.3-201ENST00000603556 477 ntBASIC1.9□□□□□ -2.11
SMC3Q9UQE7 HULC.1-201ENST00000612720 240 ntBASIC1.9□□□□□ -2.11
SMC3Q9UQE7 AL159153.1-201ENST00000619688 317 ntBASIC1.9□□□□□ -2.11
SMC3Q9UQE7 AC124864.2-201ENST00000624736 186 ntBASIC1.9□□□□□ -2.11
SMC3Q9UQE7 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SMC3Q9UQE7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SMC3Q9UQE7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.9□□□□□ -2.11
SMC3Q9UQE7 Y_RNA.38-201ENST00000362617 102 ntBASIC1.89□□□□□ -2.11
SMC3Q9UQE7 SNORA69-201ENST00000383895 132 ntBASIC1.89□□□□□ -2.11
SMC3Q9UQE7 Y_RNA.480-201ENST00000384364 102 ntBASIC1.89□□□□□ -2.11
SMC3Q9UQE7 RNU6-434P-201ENST00000384376 107 ntBASIC1.89□□□□□ -2.11
SMC3Q9UQE7 Y_RNA.516-201ENST00000384541 124 ntBASIC1.89□□□□□ -2.11
SMC3Q9UQE7 MIR29B2-201ENST00000385055 81 ntBASIC1.89□□□□□ -2.11
SMC3Q9UQE7 RNA5SP219-201ENST00000390940 113 ntBASIC1.89□□□□□ -2.11
SMC3Q9UQE7 RNU2-29P-201ENST00000410423 189 ntBASIC1.89□□□□□ -2.11
SMC3Q9UQE7 RNU6-1245P-201ENST00000411130 106 ntBASIC1.89□□□□□ -2.11
SMC3Q9UQE7 HMGN2P3-201ENST00000433603 273 ntBASIC1.89□□□□□ -2.11
SMC3Q9UQE7 HMGN2P5-201ENST00000436882 273 ntBASIC1.89□□□□□ -2.11
SMC3Q9UQE7 AL031274.1-201ENST00000450334 232 ntBASIC1.89□□□□□ -2.11
SMC3Q9UQE7 PRELID3BP1-201ENST00000457142 540 ntBASIC1.89□□□□□ -2.11
SMC3Q9UQE7 snoU13.26-201ENST00000459452 105 ntBASIC1.89□□□□□ -2.11
SMC3Q9UQE7 AL163973.1-201ENST00000484753 577 ntBASIC1.89□□□□□ -2.11
SMC3Q9UQE7 RPL30P1-201ENST00000488676 339 ntBASIC1.89□□□□□ -2.11
SMC3Q9UQE7 AC107401.1-201ENST00000503426 685 ntBASIC1.89□□□□□ -2.11
SMC3Q9UQE7 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.89□□□□□ -2.11
SMC3Q9UQE7 YWHAEP4-201ENST00000505390 198 ntBASIC1.89□□□□□ -2.11
SMC3Q9UQE7 HMGB1P29-201ENST00000505659 499 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms