Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.07□□□□□ -1.6
HPS5Q9UPZ3 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HPS5Q9UPZ3 Y_RNA.219-201ENST00000364232 113 ntBASIC5.07□□□□□ -1.6
HPS5Q9UPZ3 RNU6-309P-201ENST00000364573 106 ntBASIC5.07□□□□□ -1.6
HPS5Q9UPZ3 RNU6-820P-201ENST00000384273 107 ntBASIC5.07□□□□□ -1.6
HPS5Q9UPZ3 RNU6-1152P-201ENST00000384576 107 ntBASIC5.07□□□□□ -1.6
HPS5Q9UPZ3 MIR34B-201ENST00000385076 84 ntBASIC5.07□□□□□ -1.6
HPS5Q9UPZ3 UBE2Q2P12-201ENST00000414573 204 ntBASIC5.07□□□□□ -1.6
HPS5Q9UPZ3 RPL39P40-201ENST00000445481 146 ntBASIC5.07□□□□□ -1.6
HPS5Q9UPZ3 PPIAP15-201ENST00000479662 484 ntBASIC5.07□□□□□ -1.6
HPS5Q9UPZ3 RN7SKP43-201ENST00000516173 320 ntBASIC5.07□□□□□ -1.6
HPS5Q9UPZ3 RNU6-970P-201ENST00000516312 107 ntBASIC5.07□□□□□ -1.6
HPS5Q9UPZ3 SNORA31.16-201ENST00000516773 139 ntBASIC5.07□□□□□ -1.6
HPS5Q9UPZ3 AL121772.2-201ENST00000614331 297 ntBASIC5.07□□□□□ -1.6
HPS5Q9UPZ3 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HPS5Q9UPZ3 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HPS5Q9UPZ3 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
HPS5Q9UPZ3 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
HPS5Q9UPZ3 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
HPS5Q9UPZ3 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
HPS5Q9UPZ3 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HPS5Q9UPZ3 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HPS5Q9UPZ3 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HPS5Q9UPZ3 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.06□□□□□ -1.6
HPS5Q9UPZ3 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
HPS5Q9UPZ3 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
HPS5Q9UPZ3 SNORA72-201ENST00000384339 132 ntBASIC5.06□□□□□ -1.6
HPS5Q9UPZ3 MIR153-1-201ENST00000384914 90 ntBASIC5.06□□□□□ -1.6
HPS5Q9UPZ3 MIR29B2-201ENST00000385055 81 ntBASIC5.06□□□□□ -1.6
HPS5Q9UPZ3 MIR1302-5-201ENST00000408164 150 ntBASIC5.06□□□□□ -1.6
HPS5Q9UPZ3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC5.06□□□□□ -1.6
HPS5Q9UPZ3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC5.06□□□□□ -1.6
HPS5Q9UPZ3 RN7SL691P-201ENST00000494487 301 ntBASIC5.06□□□□□ -1.6
HPS5Q9UPZ3 UBE2Q2P6-201ENST00000612666 153 ntBASIC5.06□□□□□ -1.6
HPS5Q9UPZ3 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HPS5Q9UPZ3 MIR7154-201ENST00000620673 73 ntBASIC5.06□□□□□ -1.6
HPS5Q9UPZ3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HPS5Q9UPZ3 MIR3529-201ENST00000637713 78 ntBASIC5.06□□□□□ -1.6
HPS5Q9UPZ3 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HPS5Q9UPZ3 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HPS5Q9UPZ3 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HPS5Q9UPZ3 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
HPS5Q9UPZ3 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HPS5Q9UPZ3 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
HPS5Q9UPZ3 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.05□□□□□ -1.6
HPS5Q9UPZ3 AC118273.1-201ENST00000525324 3006 ntBASIC5.05□□□□□ -1.6
HPS5Q9UPZ3 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
HPS5Q9UPZ3 SNORD12C-201ENST00000386307 89 ntBASIC5.05□□□□□ -1.6
HPS5Q9UPZ3 PTMAP5-201ENST00000393073 333 ntBASIC5.05□□□□□ -1.6
HPS5Q9UPZ3 AC019205.3-201ENST00000424573 156 ntBASIC5.05□□□□□ -1.6
HPS5Q9UPZ3 AL691449.1-201ENST00000426570 421 ntBASIC5.05□□□□□ -1.6
HPS5Q9UPZ3 RPL21P10-201ENST00000463521 490 ntBASIC5.05□□□□□ -1.6
HPS5Q9UPZ3 RN7SL812P-201ENST00000493791 279 ntBASIC5.05□□□□□ -1.6
HPS5Q9UPZ3 RNA5SP154-201ENST00000516193 111 ntBASIC5.05□□□□□ -1.6
HPS5Q9UPZ3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.05□□□□□ -1.6
HPS5Q9UPZ3 MED28P6-201ENST00000558776 231 ntBASIC5.05□□□□□ -1.6
HPS5Q9UPZ3 AC025754.2-201ENST00000606491 432 ntBASIC5.05□□□□□ -1.6
HPS5Q9UPZ3 MIR548AY-201ENST00000617669 107 ntBASIC5.05□□□□□ -1.6
HPS5Q9UPZ3 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HPS5Q9UPZ3 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HPS5Q9UPZ3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
HPS5Q9UPZ3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HPS5Q9UPZ3 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HPS5Q9UPZ3 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
HPS5Q9UPZ3 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
HPS5Q9UPZ3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HPS5Q9UPZ3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HPS5Q9UPZ3 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
HPS5Q9UPZ3 ADAM3A-203ENST00000461344 2157 ntBASIC5.04□□□□□ -1.6
HPS5Q9UPZ3 AC006971.1-201ENST00000407916 4486 ntBASIC5.04□□□□□ -1.6
HPS5Q9UPZ3 MIR450A2-201ENST00000385022 100 ntBASIC5.04□□□□□ -1.6
HPS5Q9UPZ3 SNORA36B-201ENST00000410438 131 ntBASIC5.04□□□□□ -1.6
HPS5Q9UPZ3 AL157831.1-201ENST00000426134 473 ntBASIC5.04□□□□□ -1.6
HPS5Q9UPZ3 PTMAP3-201ENST00000447474 330 ntBASIC5.04□□□□□ -1.6
HPS5Q9UPZ3 AC103975.1-201ENST00000482506 483 ntBASIC5.04□□□□□ -1.6
HPS5Q9UPZ3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC5.04□□□□□ -1.6
HPS5Q9UPZ3 RNU6ATAC17P-201ENST00000516074 71 ntBASIC5.04□□□□□ -1.6
HPS5Q9UPZ3 RNU1-103P-201ENST00000516502 125 ntBASIC5.04□□□□□ -1.6
HPS5Q9UPZ3 AC007012.1-201ENST00000567192 175 ntBASIC5.04□□□□□ -1.6
HPS5Q9UPZ3 MIR6134-201ENST00000617606 109 ntBASIC5.04□□□□□ -1.6
HPS5Q9UPZ3 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.04□□□□□ -1.6
HPS5Q9UPZ3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC5.04□□□□□ -1.6
HPS5Q9UPZ3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC5.04□□□□□ -1.6
HPS5Q9UPZ3 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.04□□□□□ -1.6
HPS5Q9UPZ3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HPS5Q9UPZ3 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
HPS5Q9UPZ3 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HPS5Q9UPZ3 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
HPS5Q9UPZ3 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.03□□□□□ -1.6
HPS5Q9UPZ3 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
HPS5Q9UPZ3 MIR218-2-201ENST00000385006 110 ntBASIC5.03□□□□□ -1.6
HPS5Q9UPZ3 RNU6-440P-201ENST00000390882 105 ntBASIC5.03□□□□□ -1.6
HPS5Q9UPZ3 FTH1P15-201ENST00000406984 280 ntBASIC5.03□□□□□ -1.6
HPS5Q9UPZ3 AL590383.1-201ENST00000428602 75 ntBASIC5.03□□□□□ -1.6
HPS5Q9UPZ3 TOMM22P2-201ENST00000430735 237 ntBASIC5.03□□□□□ -1.6
HPS5Q9UPZ3 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.03□□□□□ -1.6
HPS5Q9UPZ3 RNU7-115P-201ENST00000516433 55 ntBASIC5.03□□□□□ -1.6
HPS5Q9UPZ3 RNA5SP49-201ENST00000516450 115 ntBASIC5.03□□□□□ -1.6
HPS5Q9UPZ3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HPS5Q9UPZ3 AC099778.2-201ENST00000610904 211 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms