Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CUEDC1Q9NWM3 MAPK10-303ENST00000641324 3959 ntBASIC4.38□□□□□ -1.71
CUEDC1Q9NWM3 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CUEDC1Q9NWM3 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CUEDC1Q9NWM3 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CUEDC1Q9NWM3 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
CUEDC1Q9NWM3 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CUEDC1Q9NWM3 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CUEDC1Q9NWM3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.37□□□□□ -1.71
CUEDC1Q9NWM3 SNORD73B-201ENST00000364394 72 ntBASIC4.37□□□□□ -1.71
CUEDC1Q9NWM3 AL359837.1-201ENST00000381357 287 ntBASIC4.37□□□□□ -1.71
CUEDC1Q9NWM3 MIR134-201ENST00000385258 73 ntBASIC4.37□□□□□ -1.71
CUEDC1Q9NWM3 RNY4P30-201ENST00000410216 95 ntBASIC4.37□□□□□ -1.71
CUEDC1Q9NWM3 RPEP3-201ENST00000425462 676 ntBASIC4.37□□□□□ -1.71
CUEDC1Q9NWM3 RPS12P10-201ENST00000427031 377 ntBASIC4.37□□□□□ -1.71
CUEDC1Q9NWM3 AC245047.4-201ENST00000433189 144 ntBASIC4.37□□□□□ -1.71
CUEDC1Q9NWM3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CUEDC1Q9NWM3 AL031183.1-201ENST00000457667 207 ntBASIC4.37□□□□□ -1.71
CUEDC1Q9NWM3 RNA5SP446-201ENST00000515955 82 ntBASIC4.37□□□□□ -1.71
CUEDC1Q9NWM3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.37□□□□□ -1.71
CUEDC1Q9NWM3 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CUEDC1Q9NWM3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CUEDC1Q9NWM3 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CUEDC1Q9NWM3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CUEDC1Q9NWM3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CUEDC1Q9NWM3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CUEDC1Q9NWM3 RNU6-778P-201ENST00000363269 103 ntBASIC4.36□□□□□ -1.71
CUEDC1Q9NWM3 RNA5SP509-201ENST00000364577 119 ntBASIC4.36□□□□□ -1.71
CUEDC1Q9NWM3 RNU1-100P-201ENST00000365255 165 ntBASIC4.36□□□□□ -1.71
CUEDC1Q9NWM3 RNA5SP151-201ENST00000365632 117 ntBASIC4.36□□□□□ -1.71
CUEDC1Q9NWM3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CUEDC1Q9NWM3 SNORA37-201ENST00000384504 129 ntBASIC4.36□□□□□ -1.71
CUEDC1Q9NWM3 RNU6-880P-201ENST00000384526 107 ntBASIC4.36□□□□□ -1.71
CUEDC1Q9NWM3 SNORA70C-201ENST00000384538 135 ntBASIC4.36□□□□□ -1.71
CUEDC1Q9NWM3 SNORA12.1-201ENST00000390873 148 ntBASIC4.36□□□□□ -1.71
CUEDC1Q9NWM3 MIR921-201ENST00000401133 56 ntBASIC4.36□□□□□ -1.71
CUEDC1Q9NWM3 RNU2-60P-201ENST00000517290 128 ntBASIC4.36□□□□□ -1.71
CUEDC1Q9NWM3 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.36□□□□□ -1.71
CUEDC1Q9NWM3 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.36□□□□□ -1.71
CUEDC1Q9NWM3 AC106785.1-201ENST00000565935 262 ntBASIC4.36□□□□□ -1.71
CUEDC1Q9NWM3 MIR4644-201ENST00000579929 84 ntBASIC4.36□□□□□ -1.71
CUEDC1Q9NWM3 MIR3939-201ENST00000582614 106 ntBASIC4.36□□□□□ -1.71
CUEDC1Q9NWM3 AC091178.1-203ENST00000584586 279 ntBASIC4.36□□□□□ -1.71
CUEDC1Q9NWM3 AC004832.5-201ENST00000608677 401 ntBASIC4.36□□□□□ -1.71
CUEDC1Q9NWM3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.36□□□□□ -1.71
CUEDC1Q9NWM3 U2.21-201ENST00000637295 81 ntBASIC4.36□□□□□ -1.71
CUEDC1Q9NWM3 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CUEDC1Q9NWM3 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.36□□□□□ -1.71
CUEDC1Q9NWM3 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
CUEDC1Q9NWM3 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
CUEDC1Q9NWM3 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.36□□□□□ -1.71
CUEDC1Q9NWM3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.35□□□□□ -1.71
CUEDC1Q9NWM3 AC092435.4-201ENST00000623012 4159 ntBASIC4.35□□□□□ -1.71
CUEDC1Q9NWM3 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CUEDC1Q9NWM3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CUEDC1Q9NWM3 CPHL1P-201ENST00000461341 3407 ntBASIC4.35□□□□□ -1.71
CUEDC1Q9NWM3 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CUEDC1Q9NWM3 MIR367-201ENST00000362299 68 ntBASIC4.35□□□□□ -1.71
CUEDC1Q9NWM3 RNU6-727P-201ENST00000363592 107 ntBASIC4.35□□□□□ -1.71
CUEDC1Q9NWM3 RNA5SP372-201ENST00000390836 115 ntBASIC4.35□□□□□ -1.71
CUEDC1Q9NWM3 RNA5SP252-201ENST00000391131 119 ntBASIC4.35□□□□□ -1.71
CUEDC1Q9NWM3 AL353748.1-201ENST00000440753 474 ntBASIC4.35□□□□□ -1.71
CUEDC1Q9NWM3 AC125238.1-201ENST00000448842 249 ntBASIC4.35□□□□□ -1.71
CUEDC1Q9NWM3 RNU7-141P-201ENST00000459304 62 ntBASIC4.35□□□□□ -1.71
CUEDC1Q9NWM3 AP002884.2-201ENST00000471647 395 ntBASIC4.35□□□□□ -1.71
CUEDC1Q9NWM3 RPS29P20-201ENST00000489592 171 ntBASIC4.35□□□□□ -1.71
CUEDC1Q9NWM3 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.35□□□□□ -1.71
CUEDC1Q9NWM3 SNORA31.23-201ENST00000517219 133 ntBASIC4.35□□□□□ -1.71
CUEDC1Q9NWM3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.35□□□□□ -1.71
CUEDC1Q9NWM3 AC012468.1-201ENST00000604888 430 ntBASIC4.35□□□□□ -1.71
CUEDC1Q9NWM3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.35□□□□□ -1.71
CUEDC1Q9NWM3 AC005086.4-201ENST00000623065 213 ntBASIC4.35□□□□□ -1.71
CUEDC1Q9NWM3 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.35□□□□□ -1.71
CUEDC1Q9NWM3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.35□□□□□ -1.71
CUEDC1Q9NWM3 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.35□□□□□ -1.71
CUEDC1Q9NWM3 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.35□□□□□ -1.71
CUEDC1Q9NWM3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CUEDC1Q9NWM3 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CUEDC1Q9NWM3 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CUEDC1Q9NWM3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.34□□□□□ -1.71
CUEDC1Q9NWM3 ADAM3A-203ENST00000461344 2157 ntBASIC4.34□□□□□ -1.71
CUEDC1Q9NWM3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CUEDC1Q9NWM3 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.34□□□□□ -1.71
CUEDC1Q9NWM3 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.34□□□□□ -1.71
CUEDC1Q9NWM3 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CUEDC1Q9NWM3 Y_RNA.120-201ENST00000363304 110 ntBASIC4.34□□□□□ -1.71
CUEDC1Q9NWM3 Y_RNA.243-201ENST00000364481 109 ntBASIC4.34□□□□□ -1.71
CUEDC1Q9NWM3 RNU6-1082P-201ENST00000364574 107 ntBASIC4.34□□□□□ -1.71
CUEDC1Q9NWM3 Y_RNA.310-201ENST00000365063 113 ntBASIC4.34□□□□□ -1.71
CUEDC1Q9NWM3 Y_RNA.341-201ENST00000365341 102 ntBASIC4.34□□□□□ -1.71
CUEDC1Q9NWM3 MIR1183-201ENST00000408856 89 ntBASIC4.34□□□□□ -1.71
CUEDC1Q9NWM3 RNU6-855P-201ENST00000410395 104 ntBASIC4.34□□□□□ -1.71
CUEDC1Q9NWM3 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.34□□□□□ -1.71
CUEDC1Q9NWM3 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.34□□□□□ -1.71
CUEDC1Q9NWM3 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.34□□□□□ -1.71
CUEDC1Q9NWM3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CUEDC1Q9NWM3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.72
CUEDC1Q9NWM3 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.34□□□□□ -1.72
CUEDC1Q9NWM3 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
CUEDC1Q9NWM3 AC068254.2-201ENST00000623938 3577 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms