Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 RNU6-312P-201ENST00000364629 107 ntBASIC5.5□□□□□ -1.53
RTN4Q9NQC3 SNORA67-201ENST00000384423 137 ntBASIC5.5□□□□□ -1.53
RTN4Q9NQC3 MIR526A2-201ENST00000390198 65 ntBASIC5.5□□□□□ -1.53
RTN4Q9NQC3 SNORA77-201ENST00000408716 125 ntBASIC5.5□□□□□ -1.53
RTN4Q9NQC3 RPS29P9-201ENST00000440360 171 ntBASIC5.5□□□□□ -1.53
RTN4Q9NQC3 AC016717.1-201ENST00000448918 286 ntBASIC5.5□□□□□ -1.53
RTN4Q9NQC3 AC093259.1-201ENST00000509755 300 ntBASIC5.5□□□□□ -1.53
RTN4Q9NQC3 PHBP14-201ENST00000512887 367 ntBASIC5.5□□□□□ -1.53
RTN4Q9NQC3 RNU6-1278P-201ENST00000516130 107 ntBASIC5.5□□□□□ -1.53
RTN4Q9NQC3 MRPS18CP4-201ENST00000535821 231 ntBASIC5.5□□□□□ -1.53
RTN4Q9NQC3 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC5.5□□□□□ -1.53
RTN4Q9NQC3 MIR4302-201ENST00000638058 60 ntBASIC5.5□□□□□ -1.53
RTN4Q9NQC3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
RTN4Q9NQC3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
RTN4Q9NQC3 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.49□□□□□ -1.53
RTN4Q9NQC3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC5.49□□□□□ -1.53
RTN4Q9NQC3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC5.49□□□□□ -1.53
RTN4Q9NQC3 RNU6-418P-201ENST00000384035 107 ntBASIC5.49□□□□□ -1.53
RTN4Q9NQC3 MIR518C-201ENST00000384822 101 ntBASIC5.49□□□□□ -1.53
RTN4Q9NQC3 SNORA17A-201ENST00000391185 133 ntBASIC5.49□□□□□ -1.53
RTN4Q9NQC3 RNU11-5P-201ENST00000391216 129 ntBASIC5.49□□□□□ -1.53
RTN4Q9NQC3 RN7SKP216-201ENST00000411050 312 ntBASIC5.49□□□□□ -1.53
RTN4Q9NQC3 MTND2P29-201ENST00000438595 412 ntBASIC5.49□□□□□ -1.53
RTN4Q9NQC3 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.49□□□□□ -1.53
RTN4Q9NQC3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC5.49□□□□□ -1.53
RTN4Q9NQC3 SNORA17.5-201ENST00000630429 132 ntBASIC5.49□□□□□ -1.53
RTN4Q9NQC3 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RTN4Q9NQC3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC5.49□□□□□ -1.53
RTN4Q9NQC3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RTN4Q9NQC3 CENPCP1-201ENST00000533085 2578 ntBASIC5.49□□□□□ -1.53
RTN4Q9NQC3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC5.49□□□□□ -1.53
RTN4Q9NQC3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC5.49□□□□□ -1.53
RTN4Q9NQC3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RTN4Q9NQC3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RTN4Q9NQC3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC5.48□□□□□ -1.53
RTN4Q9NQC3 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.48□□□□□ -1.53
RTN4Q9NQC3 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
RTN4Q9NQC3 Y_RNA.332-201ENST00000365271 113 ntBASIC5.48□□□□□ -1.53
RTN4Q9NQC3 RNU6-407P-201ENST00000365280 104 ntBASIC5.48□□□□□ -1.53
RTN4Q9NQC3 RNU6-220P-201ENST00000390919 107 ntBASIC5.48□□□□□ -1.53
RTN4Q9NQC3 AC002075.2-201ENST00000425207 252 ntBASIC5.48□□□□□ -1.53
RTN4Q9NQC3 AL135790.2-201ENST00000437701 267 ntBASIC5.48□□□□□ -1.53
RTN4Q9NQC3 AC005840.1-201ENST00000498412 377 ntBASIC5.48□□□□□ -1.53
RTN4Q9NQC3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC5.48□□□□□ -1.53
RTN4Q9NQC3 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.48□□□□□ -1.53
RTN4Q9NQC3 RNA5SP20-201ENST00000515976 84 ntBASIC5.48□□□□□ -1.53
RTN4Q9NQC3 RNU6-1146P-201ENST00000516282 102 ntBASIC5.48□□□□□ -1.53
RTN4Q9NQC3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC5.48□□□□□ -1.53
RTN4Q9NQC3 AC096577.2-201ENST00000611455 153 ntBASIC5.48□□□□□ -1.53
RTN4Q9NQC3 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
RTN4Q9NQC3 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RTN4Q9NQC3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC5.48□□□□□ -1.53
RTN4Q9NQC3 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.48□□□□□ -1.53
RTN4Q9NQC3 AC018555.1-201ENST00000567548 1980 ntBASIC5.47□□□□□ -1.53
RTN4Q9NQC3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC5.47□□□□□ -1.53
RTN4Q9NQC3 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
RTN4Q9NQC3 RNU1-18P-201ENST00000363062 164 ntBASIC5.47□□□□□ -1.53
RTN4Q9NQC3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.47□□□□□ -1.53
RTN4Q9NQC3 AC108075.1-201ENST00000424692 529 ntBASIC5.47□□□□□ -1.53
RTN4Q9NQC3 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.47□□□□□ -1.53
RTN4Q9NQC3 RNU7-141P-201ENST00000459304 62 ntBASIC5.47□□□□□ -1.53
RTN4Q9NQC3 SUMO2P18-201ENST00000518873 252 ntBASIC5.47□□□□□ -1.53
RTN4Q9NQC3 IFITM8P-201ENST00000522529 394 ntBASIC5.47□□□□□ -1.53
RTN4Q9NQC3 AC092490.3-201ENST00000545370 572 ntBASIC5.47□□□□□ -1.53
RTN4Q9NQC3 MIR5047-201ENST00000579212 100 ntBASIC5.47□□□□□ -1.53
RTN4Q9NQC3 MIR3117-201ENST00000584034 78 ntBASIC5.47□□□□□ -1.53
RTN4Q9NQC3 AC090115.4-201ENST00000609970 188 ntBASIC5.47□□□□□ -1.53
RTN4Q9NQC3 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.47□□□□□ -1.53
RTN4Q9NQC3 U4atac.1-201ENST00000618345 95 ntBASIC5.47□□□□□ -1.53
RTN4Q9NQC3 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC5.47□□□□□ -1.53
RTN4Q9NQC3 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
RTN4Q9NQC3 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RTN4Q9NQC3 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
RTN4Q9NQC3 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RTN4Q9NQC3 DHX9P1-201ENST00000436565 3076 ntBASIC5.46□□□□□ -1.53
RTN4Q9NQC3 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RTN4Q9NQC3 RNU1-23P-201ENST00000363361 144 ntBASIC5.46□□□□□ -1.54
RTN4Q9NQC3 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.46□□□□□ -1.54
RTN4Q9NQC3 CR769767.1-201ENST00000436337 346 ntBASIC5.46□□□□□ -1.54
RTN4Q9NQC3 PPIAP20-201ENST00000449839 135 ntBASIC5.46□□□□□ -1.54
RTN4Q9NQC3 AC091021.1-201ENST00000468051 388 ntBASIC5.46□□□□□ -1.54
RTN4Q9NQC3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC5.46□□□□□ -1.54
RTN4Q9NQC3 RNU6-1337P-201ENST00000516525 95 ntBASIC5.46□□□□□ -1.54
RTN4Q9NQC3 SCARNA21.2-201ENST00000516600 166 ntBASIC5.46□□□□□ -1.54
RTN4Q9NQC3 Y_RNA.703-201ENST00000516846 111 ntBASIC5.46□□□□□ -1.54
RTN4Q9NQC3 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.46□□□□□ -1.54
RTN4Q9NQC3 AC108706.1-201ENST00000611053 297 ntBASIC5.46□□□□□ -1.54
RTN4Q9NQC3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
RTN4Q9NQC3 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
RTN4Q9NQC3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
RTN4Q9NQC3 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
RTN4Q9NQC3 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RTN4Q9NQC3 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RTN4Q9NQC3 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
RTN4Q9NQC3 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RTN4Q9NQC3 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RTN4Q9NQC3 Y_RNA.23-201ENST00000362496 106 ntBASIC5.45□□□□□ -1.54
RTN4Q9NQC3 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.45□□□□□ -1.54
RTN4Q9NQC3 AC025445.1-201ENST00000502728 300 ntBASIC5.45□□□□□ -1.54
RTN4Q9NQC3 MIR2114-201ENST00000516645 80 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms