Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
SSBP3Q9BWW4 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.21□□□□□ -1.9
SSBP3Q9BWW4 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SSBP3Q9BWW4 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SSBP3Q9BWW4 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
SSBP3Q9BWW4 Y_RNA.261-201ENST00000364631 102 ntBASIC3.21□□□□□ -1.9
SSBP3Q9BWW4 RNU6-275P-201ENST00000364910 107 ntBASIC3.21□□□□□ -1.9
SSBP3Q9BWW4 RNU6-44P-201ENST00000384045 107 ntBASIC3.21□□□□□ -1.9
SSBP3Q9BWW4 SNORA36A-201ENST00000384221 132 ntBASIC3.21□□□□□ -1.9
SSBP3Q9BWW4 MIR513C-201ENST00000401352 84 ntBASIC3.21□□□□□ -1.9
SSBP3Q9BWW4 RPL30P13-201ENST00000418873 348 ntBASIC3.21□□□□□ -1.9
SSBP3Q9BWW4 EBAG9P1-201ENST00000418955 543 ntBASIC3.21□□□□□ -1.9
SSBP3Q9BWW4 SNRPGP5-201ENST00000456003 220 ntBASIC3.21□□□□□ -1.9
SSBP3Q9BWW4 snoU13.6-201ENST00000458785 104 ntBASIC3.21□□□□□ -1.9
SSBP3Q9BWW4 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.21□□□□□ -1.9
SSBP3Q9BWW4 RNA5SP143-201ENST00000516936 115 ntBASIC3.21□□□□□ -1.9
SSBP3Q9BWW4 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SSBP3Q9BWW4 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SSBP3Q9BWW4 FTX_3.1-201ENST00000610451 147 ntBASIC3.21□□□□□ -1.9
SSBP3Q9BWW4 MIR6134-201ENST00000617606 109 ntBASIC3.21□□□□□ -1.9
SSBP3Q9BWW4 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.21□□□□□ -1.9
SSBP3Q9BWW4 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SSBP3Q9BWW4 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.21□□□□□ -1.9
SSBP3Q9BWW4 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SSBP3Q9BWW4 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SSBP3Q9BWW4 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
SSBP3Q9BWW4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 Y_RNA.127-201ENST00000363386 109 ntBASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 RNU6-1285P-201ENST00000363480 105 ntBASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 RNU6-818P-201ENST00000364837 108 ntBASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 RNU1-100P-201ENST00000365255 165 ntBASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 RNU1-73P-201ENST00000383971 164 ntBASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 RNU6-793P-201ENST00000384233 104 ntBASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 RPS26P42-201ENST00000413485 326 ntBASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 AL139247.1-201ENST00000422768 325 ntBASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 AC012306.1-201ENST00000423267 114 ntBASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 AL445584.1-201ENST00000431451 330 ntBASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 AL356535.1-201ENST00000440335 398 ntBASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 SNORA84-201ENST00000459229 133 ntBASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 AC114982.1-201ENST00000469402 321 ntBASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 Vault.1-201ENST00000516474 102 ntBASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 RNU6-966P-201ENST00000516479 104 ntBASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 RNU6-1282P-201ENST00000516735 96 ntBASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 AC006380.1-201ENST00000603598 186 ntBASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 AL034408.1-202ENST00000636088 415 ntBASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 U2.21-201ENST00000637295 81 ntBASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.2□□□□□ -1.9
SSBP3Q9BWW4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
SSBP3Q9BWW4 RNU6-778P-201ENST00000363269 103 ntBASIC3.19□□□□□ -1.9
SSBP3Q9BWW4 AL359837.1-201ENST00000381357 287 ntBASIC3.19□□□□□ -1.9
SSBP3Q9BWW4 RNU6-217P-201ENST00000384164 104 ntBASIC3.19□□□□□ -1.9
SSBP3Q9BWW4 RNU6-376P-201ENST00000384731 106 ntBASIC3.19□□□□□ -1.9
SSBP3Q9BWW4 MIR199A2-201ENST00000385289 110 ntBASIC3.19□□□□□ -1.9
SSBP3Q9BWW4 RNU6-1197P-201ENST00000391183 107 ntBASIC3.19□□□□□ -1.9
SSBP3Q9BWW4 SNORA48.7-201ENST00000391302 135 ntBASIC3.19□□□□□ -1.9
SSBP3Q9BWW4 MIR320B2-201ENST00000408479 138 ntBASIC3.19□□□□□ -1.9
SSBP3Q9BWW4 RNU2-54P-201ENST00000410299 190 ntBASIC3.19□□□□□ -1.9
SSBP3Q9BWW4 AL591419.1-201ENST00000427423 339 ntBASIC3.19□□□□□ -1.9
SSBP3Q9BWW4 HMGN2P21-201ENST00000447764 270 ntBASIC3.19□□□□□ -1.9
SSBP3Q9BWW4 AL137159.1-201ENST00000452808 512 ntBASIC3.19□□□□□ -1.9
SSBP3Q9BWW4 RPL21P129-201ENST00000491732 478 ntBASIC3.19□□□□□ -1.9
SSBP3Q9BWW4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SSBP3Q9BWW4 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.19□□□□□ -1.9
SSBP3Q9BWW4 RNU6-1333P-201ENST00000516162 93 ntBASIC3.19□□□□□ -1.9
SSBP3Q9BWW4 RNU7-121P-201ENST00000516604 62 ntBASIC3.19□□□□□ -1.9
SSBP3Q9BWW4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.19□□□□□ -1.9
SSBP3Q9BWW4 AC087499.8-201ENST00000578406 226 ntBASIC3.19□□□□□ -1.9
SSBP3Q9BWW4 MIR4431-201ENST00000579990 94 ntBASIC3.19□□□□□ -1.9
SSBP3Q9BWW4 MIR486-1-201ENST00000612171 68 ntBASIC3.19□□□□□ -1.9
SSBP3Q9BWW4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.19□□□□□ -1.9
SSBP3Q9BWW4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SSBP3Q9BWW4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SSBP3Q9BWW4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 AC006504.1-201ENST00000562493 3666 ntBASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 RNU6-1280P-201ENST00000365211 107 ntBASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 MIR539-201ENST00000365690 78 ntBASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 RNU6-245P-201ENST00000384020 107 ntBASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 U1.1-201ENST00000384101 164 ntBASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 PTMAP2-201ENST00000397627 327 ntBASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 FTH1P15-201ENST00000406984 280 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms