Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 AC017079.2-201ENST00000416102 485 ntBASIC3.22□□□□□ -1.89
NDC1Q9BTX1 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.22□□□□□ -1.89
NDC1Q9BTX1 CEACAMP4-201ENST00000457676 421 ntBASIC3.22□□□□□ -1.89
NDC1Q9BTX1 AC087477.1-201ENST00000465747 340 ntBASIC3.22□□□□□ -1.89
NDC1Q9BTX1 RN7SL807P-201ENST00000470923 297 ntBASIC3.22□□□□□ -1.89
NDC1Q9BTX1 RPS4XP22-201ENST00000480755 780 ntBASIC3.22□□□□□ -1.89
NDC1Q9BTX1 SNORD19.2-201ENST00000516978 73 ntBASIC3.22□□□□□ -1.89
NDC1Q9BTX1 NDUFB9P3-201ENST00000521269 501 ntBASIC3.22□□□□□ -1.89
NDC1Q9BTX1 CKS1BP7-201ENST00000522230 235 ntBASIC3.22□□□□□ -1.89
NDC1Q9BTX1 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.22□□□□□ -1.89
NDC1Q9BTX1 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.22□□□□□ -1.89
NDC1Q9BTX1 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.22□□□□□ -1.89
NDC1Q9BTX1 AC023824.2-201ENST00000566185 400 ntBASIC3.22□□□□□ -1.89
NDC1Q9BTX1 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.22□□□□□ -1.89
NDC1Q9BTX1 AC010900.2-201ENST00000604508 210 ntBASIC3.22□□□□□ -1.89
NDC1Q9BTX1 AC005000.2-201ENST00000605468 310 ntBASIC3.22□□□□□ -1.89
NDC1Q9BTX1 AC011476.5-201ENST00000615594 130 ntBASIC3.22□□□□□ -1.89
NDC1Q9BTX1 AC022149.2-201ENST00000621061 203 ntBASIC3.22□□□□□ -1.89
NDC1Q9BTX1 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NDC1Q9BTX1 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
NDC1Q9BTX1 AC058791.1-201ENST00000608412 3198 ntBASIC3.22□□□□□ -1.89
NDC1Q9BTX1 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
NDC1Q9BTX1 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
NDC1Q9BTX1 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NDC1Q9BTX1 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
NDC1Q9BTX1 AL391987.6-201ENST00000305671 199 ntBASIC3.21□□□□□ -1.9
NDC1Q9BTX1 Y_RNA.20-201ENST00000362479 113 ntBASIC3.21□□□□□ -1.9
NDC1Q9BTX1 SNORD27-201ENST00000363981 72 ntBASIC3.21□□□□□ -1.9
NDC1Q9BTX1 SNORD115-32-201ENST00000364079 82 ntBASIC3.21□□□□□ -1.9
NDC1Q9BTX1 RNU6-487P-201ENST00000365430 104 ntBASIC3.21□□□□□ -1.9
NDC1Q9BTX1 SNORD78.2-201ENST00000391076 69 ntBASIC3.21□□□□□ -1.9
NDC1Q9BTX1 RPL23AP95-201ENST00000426806 265 ntBASIC3.21□□□□□ -1.9
NDC1Q9BTX1 AC017083.1-201ENST00000428093 483 ntBASIC3.21□□□□□ -1.9
NDC1Q9BTX1 AC005326.1-201ENST00000429197 123 ntBASIC3.21□□□□□ -1.9
NDC1Q9BTX1 AC004383.1-201ENST00000438135 289 ntBASIC3.21□□□□□ -1.9
NDC1Q9BTX1 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.21□□□□□ -1.9
NDC1Q9BTX1 AC010401.1-201ENST00000463867 348 ntBASIC3.21□□□□□ -1.9
NDC1Q9BTX1 SNRPGP7-201ENST00000469016 106 ntBASIC3.21□□□□□ -1.9
NDC1Q9BTX1 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.21□□□□□ -1.9
NDC1Q9BTX1 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.21□□□□□ -1.9
NDC1Q9BTX1 SNORA31.1-201ENST00000515993 133 ntBASIC3.21□□□□□ -1.9
NDC1Q9BTX1 SNORA31.5-201ENST00000516190 133 ntBASIC3.21□□□□□ -1.9
NDC1Q9BTX1 AP006245.1-201ENST00000522549 120 ntBASIC3.21□□□□□ -1.9
NDC1Q9BTX1 DEFB108E-201ENST00000524692 240 ntBASIC3.21□□□□□ -1.9
NDC1Q9BTX1 MIR4659A-201ENST00000580269 81 ntBASIC3.21□□□□□ -1.9
NDC1Q9BTX1 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.21□□□□□ -1.9
NDC1Q9BTX1 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.21□□□□□ -1.9
NDC1Q9BTX1 SNORA43.4-201ENST00000629559 138 ntBASIC3.21□□□□□ -1.9
NDC1Q9BTX1 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NDC1Q9BTX1 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.21□□□□□ -1.9
NDC1Q9BTX1 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.21□□□□□ -1.9
NDC1Q9BTX1 AL513302.2-201ENST00000562313 1842 ntBASIC3.21□□□□□ -1.9
NDC1Q9BTX1 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NDC1Q9BTX1 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.21□□□□□ -1.9
NDC1Q9BTX1 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.21□□□□□ -1.9
NDC1Q9BTX1 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NDC1Q9BTX1 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.2□□□□□ -1.9
NDC1Q9BTX1 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NDC1Q9BTX1 MIR335-201ENST00000362173 94 ntBASIC3.2□□□□□ -1.9
NDC1Q9BTX1 RNA5SP197-201ENST00000363357 119 ntBASIC3.2□□□□□ -1.9
NDC1Q9BTX1 RNU6-1141P-201ENST00000364520 107 ntBASIC3.2□□□□□ -1.9
NDC1Q9BTX1 RNU6-318P-201ENST00000384283 103 ntBASIC3.2□□□□□ -1.9
NDC1Q9BTX1 RNU6-19P-201ENST00000384718 107 ntBASIC3.2□□□□□ -1.9
NDC1Q9BTX1 RNA5SP252-201ENST00000391131 119 ntBASIC3.2□□□□□ -1.9
NDC1Q9BTX1 MIR548I3-201ENST00000408378 149 ntBASIC3.2□□□□□ -1.9
NDC1Q9BTX1 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.2□□□□□ -1.9
NDC1Q9BTX1 MIR548H3-201ENST00000408771 118 ntBASIC3.2□□□□□ -1.9
NDC1Q9BTX1 MIR548I1-201ENST00000408810 149 ntBASIC3.2□□□□□ -1.9
NDC1Q9BTX1 RNA5SP390-201ENST00000410191 113 ntBASIC3.2□□□□□ -1.9
NDC1Q9BTX1 RNU6-1077P-201ENST00000410506 102 ntBASIC3.2□□□□□ -1.9
NDC1Q9BTX1 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.2□□□□□ -1.9
NDC1Q9BTX1 PTGES3P4-201ENST00000426243 356 ntBASIC3.2□□□□□ -1.9
NDC1Q9BTX1 AC006028.1-201ENST00000438379 402 ntBASIC3.2□□□□□ -1.9
NDC1Q9BTX1 AC016700.2-201ENST00000446011 156 ntBASIC3.2□□□□□ -1.9
NDC1Q9BTX1 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.2□□□□□ -1.9
NDC1Q9BTX1 AP000870.1-201ENST00000472927 406 ntBASIC3.2□□□□□ -1.9
NDC1Q9BTX1 AP001025.1-201ENST00000486139 332 ntBASIC3.2□□□□□ -1.9
NDC1Q9BTX1 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.2□□□□□ -1.9
NDC1Q9BTX1 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.2□□□□□ -1.9
NDC1Q9BTX1 AC107934.2-201ENST00000518653 310 ntBASIC3.2□□□□□ -1.9
NDC1Q9BTX1 AC016256.1-201ENST00000547971 354 ntBASIC3.2□□□□□ -1.9
NDC1Q9BTX1 HSPE1P4-201ENST00000550617 308 ntBASIC3.2□□□□□ -1.9
NDC1Q9BTX1 AC011471.1-201ENST00000585766 187 ntBASIC3.2□□□□□ -1.9
NDC1Q9BTX1 AL162713.1-201ENST00000604480 262 ntBASIC3.2□□□□□ -1.9
NDC1Q9BTX1 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.2□□□□□ -1.9
NDC1Q9BTX1 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NDC1Q9BTX1 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NDC1Q9BTX1 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.2□□□□□ -1.9
NDC1Q9BTX1 AL353743.1-202ENST00000431724 1695 ntBASIC3.2□□□□□ -1.9
NDC1Q9BTX1 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NDC1Q9BTX1 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NDC1Q9BTX1 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.19□□□□□ -1.9
NDC1Q9BTX1 RBBP8P1-201ENST00000449447 1844 ntBASIC3.19□□□□□ -1.9
NDC1Q9BTX1 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.19□□□□□ -1.9
NDC1Q9BTX1 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.19□□□□□ -1.9
NDC1Q9BTX1 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.19□□□□□ -1.9
NDC1Q9BTX1 RNU1-75P-201ENST00000347264 129 ntBASIC3.19□□□□□ -1.9
NDC1Q9BTX1 Y_RNA.16-201ENST00000362421 102 ntBASIC3.19□□□□□ -1.9
NDC1Q9BTX1 RNU6-879P-201ENST00000364328 108 ntBASIC3.19□□□□□ -1.9
NDC1Q9BTX1 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms