Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AC026726.1-201ENST00000512859 601 ntBASIC4.36□□□□□ -1.71
CALR3Q96L12 RNA5SP49-201ENST00000516450 115 ntBASIC4.36□□□□□ -1.71
CALR3Q96L12 RNU7-143P-201ENST00000516781 65 ntBASIC4.36□□□□□ -1.71
CALR3Q96L12 MIR5047-201ENST00000579212 100 ntBASIC4.36□□□□□ -1.71
CALR3Q96L12 MIR4480-201ENST00000582492 71 ntBASIC4.36□□□□□ -1.71
CALR3Q96L12 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.36□□□□□ -1.71
CALR3Q96L12 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CALR3Q96L12 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.36□□□□□ -1.71
CALR3Q96L12 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CALR3Q96L12 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CALR3Q96L12 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CALR3Q96L12 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CALR3Q96L12 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.35□□□□□ -1.71
CALR3Q96L12 RNU6-486P-201ENST00000363116 107 ntBASIC4.35□□□□□ -1.71
CALR3Q96L12 RNU6-454P-201ENST00000364292 107 ntBASIC4.35□□□□□ -1.71
CALR3Q96L12 RNA5SP139-201ENST00000364340 117 ntBASIC4.35□□□□□ -1.71
CALR3Q96L12 TOMM22P2-201ENST00000430735 237 ntBASIC4.35□□□□□ -1.71
CALR3Q96L12 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.35□□□□□ -1.71
CALR3Q96L12 RN7SL354P-201ENST00000469282 294 ntBASIC4.35□□□□□ -1.71
CALR3Q96L12 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.35□□□□□ -1.71
CALR3Q96L12 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CALR3Q96L12 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.35□□□□□ -1.71
CALR3Q96L12 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CALR3Q96L12 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CALR3Q96L12 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CALR3Q96L12 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CALR3Q96L12 RNU6-545P-201ENST00000362681 104 ntBASIC4.34□□□□□ -1.71
CALR3Q96L12 RNU6-324P-201ENST00000363957 106 ntBASIC4.34□□□□□ -1.71
CALR3Q96L12 RNVU1-6-201ENST00000364688 164 ntBASIC4.34□□□□□ -1.71
CALR3Q96L12 Y_RNA.329-201ENST00000365209 107 ntBASIC4.34□□□□□ -1.71
CALR3Q96L12 Y_RNA.464-201ENST00000384282 110 ntBASIC4.34□□□□□ -1.71
CALR3Q96L12 MIR591-201ENST00000385290 95 ntBASIC4.34□□□□□ -1.71
CALR3Q96L12 COX6CP10-201ENST00000416832 224 ntBASIC4.34□□□□□ -1.71
CALR3Q96L12 AC024067.1-201ENST00000426199 223 ntBASIC4.34□□□□□ -1.71
CALR3Q96L12 ARF4P2-201ENST00000430209 526 ntBASIC4.34□□□□□ -1.71
CALR3Q96L12 RPS29P17-201ENST00000430795 166 ntBASIC4.34□□□□□ -1.71
CALR3Q96L12 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.34□□□□□ -1.71
CALR3Q96L12 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.34□□□□□ -1.71
CALR3Q96L12 snoU13.1-201ENST00000459157 104 ntBASIC4.34□□□□□ -1.71
CALR3Q96L12 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.34□□□□□ -1.71
CALR3Q96L12 MRPS36P2-201ENST00000512569 299 ntBASIC4.34□□□□□ -1.71
CALR3Q96L12 AC099522.1-202ENST00000514718 367 ntBASIC4.34□□□□□ -1.71
CALR3Q96L12 SCARNA17.1-201ENST00000516211 143 ntBASIC4.34□□□□□ -1.71
CALR3Q96L12 SCARNA17.2-201ENST00000516334 143 ntBASIC4.34□□□□□ -1.71
CALR3Q96L12 RNA5SP519-201ENST00000516480 119 ntBASIC4.34□□□□□ -1.71
CALR3Q96L12 AP005660.1-201ENST00000522972 293 ntBASIC4.34□□□□□ -1.71
CALR3Q96L12 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.34□□□□□ -1.71
CALR3Q96L12 AC072026.1-201ENST00000605023 201 ntBASIC4.34□□□□□ -1.71
CALR3Q96L12 MIR486-1-201ENST00000612171 68 ntBASIC4.34□□□□□ -1.71
CALR3Q96L12 SCARNA17.4-201ENST00000614296 143 ntBASIC4.34□□□□□ -1.71
CALR3Q96L12 RN7SL722P-201ENST00000617780 284 ntBASIC4.34□□□□□ -1.71
CALR3Q96L12 RN7SL565P-201ENST00000618246 284 ntBASIC4.34□□□□□ -1.71
CALR3Q96L12 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.34□□□□□ -1.71
CALR3Q96L12 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.33□□□□□ -1.72
CALR3Q96L12 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CALR3Q96L12 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CALR3Q96L12 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CALR3Q96L12 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CALR3Q96L12 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CALR3Q96L12 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CALR3Q96L12 SNORD32B-201ENST00000364460 84 ntBASIC4.33□□□□□ -1.72
CALR3Q96L12 RNU6-47P-201ENST00000383866 107 ntBASIC4.33□□□□□ -1.72
CALR3Q96L12 SNORA67.2-201ENST00000384300 149 ntBASIC4.33□□□□□ -1.72
CALR3Q96L12 HMGN2P8-201ENST00000391458 268 ntBASIC4.33□□□□□ -1.72
CALR3Q96L12 U3.40-201ENST00000408706 208 ntBASIC4.33□□□□□ -1.72
CALR3Q96L12 AL590762.4-201ENST00000425885 253 ntBASIC4.33□□□□□ -1.72
CALR3Q96L12 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.33□□□□□ -1.72
CALR3Q96L12 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.33□□□□□ -1.72
CALR3Q96L12 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CALR3Q96L12 RPS29P26-201ENST00000477483 171 ntBASIC4.33□□□□□ -1.72
CALR3Q96L12 RNU6-436P-201ENST00000516171 114 ntBASIC4.33□□□□□ -1.72
CALR3Q96L12 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CALR3Q96L12 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.33□□□□□ -1.72
CALR3Q96L12 AP003122.5-201ENST00000527668 3766 ntBASIC4.33□□□□□ -1.72
CALR3Q96L12 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.32□□□□□ -1.72
CALR3Q96L12 AC091564.4-201ENST00000533934 2194 ntBASIC4.32□□□□□ -1.72
CALR3Q96L12 U3.8-201ENST00000363675 217 ntBASIC4.32□□□□□ -1.72
CALR3Q96L12 RNU6-682P-201ENST00000363843 106 ntBASIC4.32□□□□□ -1.72
CALR3Q96L12 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.32□□□□□ -1.72
CALR3Q96L12 YME1L1P1-201ENST00000429435 297 ntBASIC4.32□□□□□ -1.72
CALR3Q96L12 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CALR3Q96L12 SCARNA11.3-201ENST00000517276 130 ntBASIC4.32□□□□□ -1.72
CALR3Q96L12 IGLVIV-65-201ENST00000517313 360 ntBASIC4.32□□□□□ -1.72
CALR3Q96L12 AC087441.2-201ENST00000529141 262 ntBASIC4.32□□□□□ -1.72
CALR3Q96L12 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.32□□□□□ -1.72
CALR3Q96L12 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.32□□□□□ -1.72
CALR3Q96L12 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.32□□□□□ -1.72
CALR3Q96L12 MIR6719-201ENST00000622428 87 ntBASIC4.32□□□□□ -1.72
CALR3Q96L12 AC090517.3-201ENST00000625170 141 ntBASIC4.32□□□□□ -1.72
CALR3Q96L12 snoU18.1-201ENST00000629629 71 ntBASIC4.32□□□□□ -1.72
CALR3Q96L12 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CALR3Q96L12 AC006504.1-201ENST00000562493 3666 ntBASIC4.32□□□□□ -1.72
CALR3Q96L12 Z82217.1-201ENST00000625157 8149 ntBASIC4.32□□□□□ -1.72
CALR3Q96L12 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CALR3Q96L12 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CALR3Q96L12 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.31□□□□□ -1.72
CALR3Q96L12 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CALR3Q96L12 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.31□□□□□ -1.72
CALR3Q96L12 RNU1-101P-201ENST00000391171 127 ntBASIC4.31□□□□□ -1.72
CALR3Q96L12 AC006011.1-201ENST00000442758 349 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms