Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.97□□□□□ -1.77
SHKBP1Q8TBC3 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
SHKBP1Q8TBC3 CUL1P1-201ENST00000509510 2425 ntBASIC3.96□□□□□ -1.77
SHKBP1Q8TBC3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.96□□□□□ -1.77
SHKBP1Q8TBC3 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.96□□□□□ -1.78
SHKBP1Q8TBC3 RNU6-199P-201ENST00000362954 107 ntBASIC3.96□□□□□ -1.78
SHKBP1Q8TBC3 snoU2_19.4-201ENST00000364329 80 ntBASIC3.96□□□□□ -1.78
SHKBP1Q8TBC3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SHKBP1Q8TBC3 RNU6-1245P-201ENST00000411130 106 ntBASIC3.96□□□□□ -1.78
SHKBP1Q8TBC3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.96□□□□□ -1.78
SHKBP1Q8TBC3 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.96□□□□□ -1.78
SHKBP1Q8TBC3 AC112220.1-201ENST00000434628 355 ntBASIC3.96□□□□□ -1.78
SHKBP1Q8TBC3 AC106707.2-201ENST00000484182 374 ntBASIC3.96□□□□□ -1.78
SHKBP1Q8TBC3 RNA5SP164-201ENST00000516533 110 ntBASIC3.96□□□□□ -1.78
SHKBP1Q8TBC3 AC021269.2-201ENST00000532318 330 ntBASIC3.96□□□□□ -1.78
SHKBP1Q8TBC3 MIR6129-201ENST00000616087 109 ntBASIC3.96□□□□□ -1.78
SHKBP1Q8TBC3 AC024581.2-201ENST00000619986 252 ntBASIC3.96□□□□□ -1.78
SHKBP1Q8TBC3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.96□□□□□ -1.78
SHKBP1Q8TBC3 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SHKBP1Q8TBC3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SHKBP1Q8TBC3 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SHKBP1Q8TBC3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SHKBP1Q8TBC3 MTND5P35-201ENST00000557537 1720 ntBASIC3.95□□□□□ -1.78
SHKBP1Q8TBC3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
SHKBP1Q8TBC3 RNU6-755P-201ENST00000364400 103 ntBASIC3.95□□□□□ -1.78
SHKBP1Q8TBC3 MIR183-201ENST00000384958 110 ntBASIC3.95□□□□□ -1.78
SHKBP1Q8TBC3 MIR518D-201ENST00000385014 87 ntBASIC3.95□□□□□ -1.78
SHKBP1Q8TBC3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SHKBP1Q8TBC3 MIR888-201ENST00000401186 77 ntBASIC3.95□□□□□ -1.78
SHKBP1Q8TBC3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.95□□□□□ -1.78
SHKBP1Q8TBC3 RNU2-54P-201ENST00000410299 190 ntBASIC3.95□□□□□ -1.78
SHKBP1Q8TBC3 ELOCP21-201ENST00000412558 336 ntBASIC3.95□□□□□ -1.78
SHKBP1Q8TBC3 RPL27AP8-201ENST00000424277 446 ntBASIC3.95□□□□□ -1.78
SHKBP1Q8TBC3 EEF1B2P7-201ENST00000451177 676 ntBASIC3.95□□□□□ -1.78
SHKBP1Q8TBC3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.95□□□□□ -1.78
SHKBP1Q8TBC3 RPL30P12-201ENST00000474666 353 ntBASIC3.95□□□□□ -1.78
SHKBP1Q8TBC3 AC110768.1-201ENST00000509222 400 ntBASIC3.95□□□□□ -1.78
SHKBP1Q8TBC3 RNU4-60P-201ENST00000517239 135 ntBASIC3.95□□□□□ -1.78
SHKBP1Q8TBC3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.95□□□□□ -1.78
SHKBP1Q8TBC3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SHKBP1Q8TBC3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.95□□□□□ -1.78
SHKBP1Q8TBC3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.95□□□□□ -1.78
SHKBP1Q8TBC3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.95□□□□□ -1.78
SHKBP1Q8TBC3 AC007179.3-201ENST00000604976 235 ntBASIC3.95□□□□□ -1.78
SHKBP1Q8TBC3 AC011603.4-201ENST00000611325 277 ntBASIC3.95□□□□□ -1.78
SHKBP1Q8TBC3 BMS1P21-201ENST00000634565 365 ntBASIC3.95□□□□□ -1.78
SHKBP1Q8TBC3 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
SHKBP1Q8TBC3 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SHKBP1Q8TBC3 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.95□□□□□ -1.78
SHKBP1Q8TBC3 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
SHKBP1Q8TBC3 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SHKBP1Q8TBC3 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 AC068700.1-201ENST00000565862 3754 ntBASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 RNU1-18P-201ENST00000363062 164 ntBASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 RNU1-140P-201ENST00000365040 165 ntBASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 Y_RNA.337-201ENST00000365312 102 ntBASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 RNU6-629P-201ENST00000384061 103 ntBASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 SNORA36A-201ENST00000384221 132 ntBASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 Y_RNA.498-201ENST00000384460 102 ntBASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 RNU6-476P-201ENST00000384726 107 ntBASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 AC009963.1-201ENST00000417265 157 ntBASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 GPM6BP3-201ENST00000442797 145 ntBASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 AP000705.1-201ENST00000454567 350 ntBASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 RAC1P5-201ENST00000512182 576 ntBASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 RNU6-703P-201ENST00000516946 107 ntBASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 RNA5SP54-201ENST00000516951 92 ntBASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 Y_RNA.709-201ENST00000516952 92 ntBASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 MED28P6-201ENST00000558776 231 ntBASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 AC090877.1-201ENST00000561418 344 ntBASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 AC136601.2-201ENST00000604356 474 ntBASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 AL161756.2-201ENST00000604597 246 ntBASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 SNORA62.6-201ENST00000606322 83 ntBASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 U3.45-201ENST00000607547 219 ntBASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 AL078604.3-201ENST00000615580 211 ntBASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 U6.105-201ENST00000637379 88 ntBASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.94□□□□□ -1.78
SHKBP1Q8TBC3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SHKBP1Q8TBC3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SHKBP1Q8TBC3 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.93□□□□□ -1.78
SHKBP1Q8TBC3 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.93□□□□□ -1.78
SHKBP1Q8TBC3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SHKBP1Q8TBC3 RNU5F-3P-201ENST00000363767 117 ntBASIC3.93□□□□□ -1.78
SHKBP1Q8TBC3 RNU6-270P-201ENST00000364131 105 ntBASIC3.93□□□□□ -1.78
SHKBP1Q8TBC3 Y_RNA.329-201ENST00000365209 107 ntBASIC3.93□□□□□ -1.78
SHKBP1Q8TBC3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SHKBP1Q8TBC3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.93□□□□□ -1.78
SHKBP1Q8TBC3 SNRPEP9-201ENST00000436794 238 ntBASIC3.93□□□□□ -1.78
SHKBP1Q8TBC3 AC007969.2-201ENST00000441891 191 ntBASIC3.93□□□□□ -1.78
SHKBP1Q8TBC3 snoU13.6-201ENST00000458785 104 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms