Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.47□□□□□ -1.85
SYNPOQ8N3V7 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
SYNPOQ8N3V7 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SYNPOQ8N3V7 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SYNPOQ8N3V7 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 Y_RNA.145-201ENST00000363527 102 ntBASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 Y_RNA.158-201ENST00000363651 101 ntBASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 SNORD115-32-201ENST00000364079 82 ntBASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 RNA5SP42-201ENST00000364278 115 ntBASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 RNU6-450P-201ENST00000364654 107 ntBASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 RNU6-17P-201ENST00000384245 107 ntBASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 Y_RNA.510-201ENST00000384511 114 ntBASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 RNU6-18P-201ENST00000384527 107 ntBASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 MIR549A-201ENST00000385268 96 ntBASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 CBX3P9-201ENST00000402326 552 ntBASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 Y_RNA.592-201ENST00000410274 109 ntBASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 RNU6-101P-201ENST00000410323 104 ntBASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 AL513477.1-202ENST00000417061 214 ntBASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 RPS12P18-201ENST00000442381 270 ntBASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 Z75741.1-201ENST00000446793 314 ntBASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 AP000705.1-201ENST00000454567 350 ntBASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 RN7SL330P-201ENST00000469709 307 ntBASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 AP000870.1-201ENST00000472927 406 ntBASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 AC145146.1-201ENST00000496370 254 ntBASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 CKS1BP2-201ENST00000497342 240 ntBASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 HSPE1P18-201ENST00000517602 280 ntBASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 LARP7P3-201ENST00000579888 337 ntBASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 MIR4680-201ENST00000580906 66 ntBASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 VN1R91P-201ENST00000594377 169 ntBASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 AC073657.2-201ENST00000605661 303 ntBASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 RNVU1-4-201ENST00000612985 164 ntBASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 AL162274.2-201ENST00000614406 332 ntBASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 AC008121.3-201ENST00000618726 433 ntBASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
SYNPOQ8N3V7 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
SYNPOQ8N3V7 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
SYNPOQ8N3V7 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SYNPOQ8N3V7 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
SYNPOQ8N3V7 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.45□□□□□ -1.86
SYNPOQ8N3V7 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
SYNPOQ8N3V7 Y_RNA.459-201ENST00000384251 102 ntBASIC3.45□□□□□ -1.86
SYNPOQ8N3V7 RPL30P4-201ENST00000429309 333 ntBASIC3.45□□□□□ -1.86
SYNPOQ8N3V7 MTND3P2-201ENST00000438452 342 ntBASIC3.45□□□□□ -1.86
SYNPOQ8N3V7 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.45□□□□□ -1.86
SYNPOQ8N3V7 RNU6-1137P-201ENST00000517073 99 ntBASIC3.45□□□□□ -1.86
SYNPOQ8N3V7 SCARNA3-201ENST00000517097 143 ntBASIC3.45□□□□□ -1.86
SYNPOQ8N3V7 MIR5695-201ENST00000579717 85 ntBASIC3.45□□□□□ -1.86
SYNPOQ8N3V7 AC136443.5-201ENST00000603741 370 ntBASIC3.45□□□□□ -1.86
SYNPOQ8N3V7 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.45□□□□□ -1.86
SYNPOQ8N3V7 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.45□□□□□ -1.86
SYNPOQ8N3V7 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SYNPOQ8N3V7 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
SYNPOQ8N3V7 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
SYNPOQ8N3V7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
SYNPOQ8N3V7 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
SYNPOQ8N3V7 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SYNPOQ8N3V7 RNU6-879P-201ENST00000364328 108 ntBASIC3.44□□□□□ -1.86
SYNPOQ8N3V7 SNORD14.1-201ENST00000365609 90 ntBASIC3.44□□□□□ -1.86
SYNPOQ8N3V7 RNU6-378P-201ENST00000384324 107 ntBASIC3.44□□□□□ -1.86
SYNPOQ8N3V7 Y_RNA.557-201ENST00000384680 107 ntBASIC3.44□□□□□ -1.86
SYNPOQ8N3V7 WARS2P1-201ENST00000429678 537 ntBASIC3.44□□□□□ -1.86
SYNPOQ8N3V7 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.44□□□□□ -1.86
SYNPOQ8N3V7 MTCO3P8-201ENST00000453691 755 ntBASIC3.44□□□□□ -1.86
SYNPOQ8N3V7 AC109925.1-201ENST00000478069 331 ntBASIC3.44□□□□□ -1.86
SYNPOQ8N3V7 RPL23AP70-201ENST00000483361 460 ntBASIC3.44□□□□□ -1.86
SYNPOQ8N3V7 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.44□□□□□ -1.86
SYNPOQ8N3V7 AC023141.11-201ENST00000508864 202 ntBASIC3.44□□□□□ -1.86
SYNPOQ8N3V7 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.44□□□□□ -1.86
SYNPOQ8N3V7 EIF4BP1-201ENST00000554881 351 ntBASIC3.44□□□□□ -1.86
SYNPOQ8N3V7 UBL5P4-201ENST00000562584 236 ntBASIC3.44□□□□□ -1.86
SYNPOQ8N3V7 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.44□□□□□ -1.86
SYNPOQ8N3V7 MIR5188-201ENST00000583467 113 ntBASIC3.44□□□□□ -1.86
SYNPOQ8N3V7 AC124312.5-201ENST00000604451 268 ntBASIC3.44□□□□□ -1.86
SYNPOQ8N3V7 MIR6852-201ENST00000621699 66 ntBASIC3.44□□□□□ -1.86
SYNPOQ8N3V7 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
SYNPOQ8N3V7 AC080128.1-201ENST00000474389 1917 ntBASIC3.44□□□□□ -1.86
SYNPOQ8N3V7 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SYNPOQ8N3V7 MTND5P27-201ENST00000428871 1720 ntBASIC3.44□□□□□ -1.86
SYNPOQ8N3V7 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
SYNPOQ8N3V7 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.44□□□□□ -1.86
SYNPOQ8N3V7 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SYNPOQ8N3V7 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.43□□□□□ -1.86
SYNPOQ8N3V7 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.43□□□□□ -1.86
SYNPOQ8N3V7 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
SYNPOQ8N3V7 ZNF204P-201ENST00000416749 2397 ntBASIC3.43□□□□□ -1.86
SYNPOQ8N3V7 SNORA68.1-201ENST00000364537 132 ntBASIC3.43□□□□□ -1.86
SYNPOQ8N3V7 SNORA51.11-201ENST00000384442 131 ntBASIC3.43□□□□□ -1.86
SYNPOQ8N3V7 HMGB3P2-201ENST00000411913 584 ntBASIC3.43□□□□□ -1.86
SYNPOQ8N3V7 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms