Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 RNU2-60P-201ENST00000517290 128 ntBASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 AC074050.1-201ENST00000563247 211 ntBASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 AC131055.1-201ENST00000584626 316 ntBASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 POLR3GP1-201ENST00000594073 261 ntBASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 AC073308.1-201ENST00000623696 305 ntBASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC116Q8IYX3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CCDC116Q8IYX3 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC116Q8IYX3 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.28□□□□□ -1.72
CCDC116Q8IYX3 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC116Q8IYX3 SNORD114-7-201ENST00000362520 77 ntBASIC4.28□□□□□ -1.72
CCDC116Q8IYX3 RNA5SP496-201ENST00000391240 109 ntBASIC4.28□□□□□ -1.72
CCDC116Q8IYX3 RN7SKP101-201ENST00000411376 320 ntBASIC4.28□□□□□ -1.72
CCDC116Q8IYX3 RPS12P10-201ENST00000427031 377 ntBASIC4.28□□□□□ -1.72
CCDC116Q8IYX3 RPL23AP82-202ENST00000427528 469 ntBASIC4.28□□□□□ -1.72
CCDC116Q8IYX3 RPL23AP93-201ENST00000440847 484 ntBASIC4.28□□□□□ -1.72
CCDC116Q8IYX3 RPL23AP7-203ENST00000449021 469 ntBASIC4.28□□□□□ -1.72
CCDC116Q8IYX3 CENPBD1P1-201ENST00000464061 469 ntBASIC4.28□□□□□ -1.72
CCDC116Q8IYX3 RNU6-1337P-201ENST00000516525 95 ntBASIC4.28□□□□□ -1.72
CCDC116Q8IYX3 RNA5SP468-201ENST00000516782 93 ntBASIC4.28□□□□□ -1.72
CCDC116Q8IYX3 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.28□□□□□ -1.72
CCDC116Q8IYX3 ATP5J2P6-201ENST00000565203 266 ntBASIC4.28□□□□□ -1.72
CCDC116Q8IYX3 HMGN2P15-201ENST00000585707 270 ntBASIC4.28□□□□□ -1.72
CCDC116Q8IYX3 AC069200.1-201ENST00000609511 323 ntBASIC4.28□□□□□ -1.72
CCDC116Q8IYX3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC116Q8IYX3 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC116Q8IYX3 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC116Q8IYX3 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC116Q8IYX3 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC116Q8IYX3 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
CCDC116Q8IYX3 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.73
CCDC116Q8IYX3 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CCDC116Q8IYX3 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC116Q8IYX3 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.27□□□□□ -1.73
CCDC116Q8IYX3 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC116Q8IYX3 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CCDC116Q8IYX3 RNU6-1010P-201ENST00000362757 107 ntBASIC4.27□□□□□ -1.73
CCDC116Q8IYX3 SNORD18B-201ENST00000365659 72 ntBASIC4.27□□□□□ -1.73
CCDC116Q8IYX3 RNU6-484P-201ENST00000384016 107 ntBASIC4.27□□□□□ -1.73
CCDC116Q8IYX3 RNU6-1323P-201ENST00000384025 107 ntBASIC4.27□□□□□ -1.73
CCDC116Q8IYX3 RNU6-748P-201ENST00000384648 107 ntBASIC4.27□□□□□ -1.73
CCDC116Q8IYX3 RNU6-136P-201ENST00000384663 107 ntBASIC4.27□□□□□ -1.73
CCDC116Q8IYX3 RNU6-19P-201ENST00000384718 107 ntBASIC4.27□□□□□ -1.73
CCDC116Q8IYX3 MIR873-201ENST00000401120 77 ntBASIC4.27□□□□□ -1.73
CCDC116Q8IYX3 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC116Q8IYX3 AC069285.2-201ENST00000440210 275 ntBASIC4.27□□□□□ -1.73
CCDC116Q8IYX3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC116Q8IYX3 Y_RNA.649-201ENST00000459077 103 ntBASIC4.27□□□□□ -1.73
CCDC116Q8IYX3 RNU6-437P-201ENST00000459408 95 ntBASIC4.27□□□□□ -1.73
CCDC116Q8IYX3 AC090515.1-201ENST00000465295 476 ntBASIC4.27□□□□□ -1.73
CCDC116Q8IYX3 AC105137.1-201ENST00000484355 562 ntBASIC4.27□□□□□ -1.73
CCDC116Q8IYX3 AC078817.1-201ENST00000492623 435 ntBASIC4.27□□□□□ -1.73
CCDC116Q8IYX3 Y_RNA.690-201ENST00000516603 95 ntBASIC4.27□□□□□ -1.73
CCDC116Q8IYX3 IGKV1-32-201ENST00000519290 311 ntBASIC4.27□□□□□ -1.73
CCDC116Q8IYX3 AC091178.2-201ENST00000584401 117 ntBASIC4.27□□□□□ -1.73
CCDC116Q8IYX3 AL137843.1-201ENST00000605078 385 ntBASIC4.27□□□□□ -1.73
CCDC116Q8IYX3 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC116Q8IYX3 MIR6810-201ENST00000622701 70 ntBASIC4.27□□□□□ -1.73
CCDC116Q8IYX3 AC091905.2-201ENST00000623143 306 ntBASIC4.27□□□□□ -1.73
CCDC116Q8IYX3 AC018555.1-201ENST00000567548 1980 ntBASIC4.27□□□□□ -1.73
CCDC116Q8IYX3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC116Q8IYX3 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC116Q8IYX3 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CCDC116Q8IYX3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC116Q8IYX3 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CCDC116Q8IYX3 MAPK10-372ENST00000641954 3413 ntBASIC4.26□□□□□ -1.73
CCDC116Q8IYX3 RNU6-1305P-201ENST00000364353 104 ntBASIC4.26□□□□□ -1.73
CCDC116Q8IYX3 RNA5SP151-201ENST00000365632 117 ntBASIC4.26□□□□□ -1.73
CCDC116Q8IYX3 SNORA56-201ENST00000383966 129 ntBASIC4.26□□□□□ -1.73
CCDC116Q8IYX3 AL603914.1-201ENST00000401964 204 ntBASIC4.26□□□□□ -1.73
CCDC116Q8IYX3 RNA5SP129-201ENST00000410276 118 ntBASIC4.26□□□□□ -1.73
CCDC116Q8IYX3 RNU2-55P-201ENST00000411146 174 ntBASIC4.26□□□□□ -1.73
CCDC116Q8IYX3 RPL23AP62-201ENST00000463396 453 ntBASIC4.26□□□□□ -1.73
CCDC116Q8IYX3 AC010469.1-201ENST00000463864 576 ntBASIC4.26□□□□□ -1.73
CCDC116Q8IYX3 RPL23AP54-201ENST00000495129 419 ntBASIC4.26□□□□□ -1.73
CCDC116Q8IYX3 AC091152.3-201ENST00000604227 325 ntBASIC4.26□□□□□ -1.73
CCDC116Q8IYX3 RNU6-91P-201ENST00000607774 107 ntBASIC4.26□□□□□ -1.73
CCDC116Q8IYX3 AC112484.5-201ENST00000624189 228 ntBASIC4.26□□□□□ -1.73
CCDC116Q8IYX3 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CCDC116Q8IYX3 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC116Q8IYX3 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC116Q8IYX3 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.25□□□□□ -1.73
CCDC116Q8IYX3 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CCDC116Q8IYX3 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC116Q8IYX3 AC079741.1-201ENST00000321498 212 ntBASIC4.25□□□□□ -1.73
CCDC116Q8IYX3 RNU4-41P-201ENST00000364426 143 ntBASIC4.25□□□□□ -1.73
CCDC116Q8IYX3 Y_RNA.346-201ENST00000365385 112 ntBASIC4.25□□□□□ -1.73
CCDC116Q8IYX3 RNA5SP397-201ENST00000391323 118 ntBASIC4.25□□□□□ -1.73
CCDC116Q8IYX3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC116Q8IYX3 RPL39P40-201ENST00000445481 146 ntBASIC4.25□□□□□ -1.73
CCDC116Q8IYX3 AC012671.1-201ENST00000451912 203 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms