Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RNU6-63P-201ENST00000516690 95 ntBASIC5.01□□□□□ -1.61
VARS2Q5ST30 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC5.01□□□□□ -1.61
VARS2Q5ST30 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VARS2Q5ST30 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.01□□□□□ -1.61
VARS2Q5ST30 MIR4472-2-201ENST00000582069 67 ntBASIC5.01□□□□□ -1.61
VARS2Q5ST30 FTX_3.1-201ENST00000610451 147 ntBASIC5.01□□□□□ -1.61
VARS2Q5ST30 U3.53-201ENST00000628922 216 ntBASIC5.01□□□□□ -1.61
VARS2Q5ST30 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VARS2Q5ST30 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
VARS2Q5ST30 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
VARS2Q5ST30 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VARS2Q5ST30 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VARS2Q5ST30 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
VARS2Q5ST30 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
VARS2Q5ST30 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5□□□□□ -1.61
VARS2Q5ST30 Z95331.1-201ENST00000623075 23112 ntBASIC5□□□□□ -1.61
VARS2Q5ST30 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
VARS2Q5ST30 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VARS2Q5ST30 RNU6-1209P-201ENST00000363655 107 ntBASIC5□□□□□ -1.61
VARS2Q5ST30 RNA5SP447-201ENST00000363749 119 ntBASIC5□□□□□ -1.61
VARS2Q5ST30 RNU6-60P-201ENST00000364792 103 ntBASIC5□□□□□ -1.61
VARS2Q5ST30 Y_RNA.454-201ENST00000384224 113 ntBASIC5□□□□□ -1.61
VARS2Q5ST30 Z98745.1-201ENST00000402553 494 ntBASIC5□□□□□ -1.61
VARS2Q5ST30 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC5□□□□□ -1.61
VARS2Q5ST30 HMGN2P30-201ENST00000423237 256 ntBASIC5□□□□□ -1.61
VARS2Q5ST30 RPEP3-201ENST00000425462 676 ntBASIC5□□□□□ -1.61
VARS2Q5ST30 AL732292.1-201ENST00000426692 226 ntBASIC5□□□□□ -1.61
VARS2Q5ST30 SNRPGP10-201ENST00000432323 225 ntBASIC5□□□□□ -1.61
VARS2Q5ST30 RPL23AP52-201ENST00000439311 478 ntBASIC5□□□□□ -1.61
VARS2Q5ST30 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5□□□□□ -1.61
VARS2Q5ST30 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5□□□□□ -1.61
VARS2Q5ST30 Y_RNA.659-201ENST00000515994 113 ntBASIC5□□□□□ -1.61
VARS2Q5ST30 MIR3936-201ENST00000584304 110 ntBASIC5□□□□□ -1.61
VARS2Q5ST30 AC021443.1-201ENST00000604478 211 ntBASIC5□□□□□ -1.61
VARS2Q5ST30 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5□□□□□ -1.61
VARS2Q5ST30 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC5□□□□□ -1.61
VARS2Q5ST30 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
VARS2Q5ST30 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VARS2Q5ST30 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VARS2Q5ST30 AC000123.3-201ENST00000624029 4975 ntBASIC4.99□□□□□ -1.61
VARS2Q5ST30 RNU6-832P-201ENST00000363319 107 ntBASIC4.99□□□□□ -1.61
VARS2Q5ST30 Y_RNA.531-201ENST00000384589 121 ntBASIC4.99□□□□□ -1.61
VARS2Q5ST30 SNORD77.3-201ENST00000391113 65 ntBASIC4.99□□□□□ -1.61
VARS2Q5ST30 AL162591.2-201ENST00000449634 317 ntBASIC4.99□□□□□ -1.61
VARS2Q5ST30 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.99□□□□□ -1.61
VARS2Q5ST30 MIR4777-201ENST00000583710 86 ntBASIC4.99□□□□□ -1.61
VARS2Q5ST30 AC012468.1-201ENST00000604888 430 ntBASIC4.99□□□□□ -1.61
VARS2Q5ST30 AC145423.2-201ENST00000610631 239 ntBASIC4.99□□□□□ -1.61
VARS2Q5ST30 AC011944.2-201ENST00000624440 683 ntBASIC4.99□□□□□ -1.61
VARS2Q5ST30 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.99□□□□□ -1.61
VARS2Q5ST30 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
VARS2Q5ST30 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
VARS2Q5ST30 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
VARS2Q5ST30 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VARS2Q5ST30 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.99□□□□□ -1.61
VARS2Q5ST30 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VARS2Q5ST30 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.98□□□□□ -1.61
VARS2Q5ST30 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
VARS2Q5ST30 RNU4-13P-201ENST00000364019 141 ntBASIC4.98□□□□□ -1.61
VARS2Q5ST30 SNORA71.2-201ENST00000364941 134 ntBASIC4.98□□□□□ -1.61
VARS2Q5ST30 SNORD61-201ENST00000384252 73 ntBASIC4.98□□□□□ -1.61
VARS2Q5ST30 MIR577-201ENST00000385196 96 ntBASIC4.98□□□□□ -1.61
VARS2Q5ST30 PTMAP5-201ENST00000393073 333 ntBASIC4.98□□□□□ -1.61
VARS2Q5ST30 RNA5SP511-201ENST00000410487 115 ntBASIC4.98□□□□□ -1.61
VARS2Q5ST30 RNU4-69P-201ENST00000410677 143 ntBASIC4.98□□□□□ -1.61
VARS2Q5ST30 RPL32P35-201ENST00000415214 394 ntBASIC4.98□□□□□ -1.61
VARS2Q5ST30 OR2AH1P-201ENST00000425717 928 ntBASIC4.98□□□□□ -1.61
VARS2Q5ST30 RPS26P47-201ENST00000427219 348 ntBASIC4.98□□□□□ -1.61
VARS2Q5ST30 AL591419.1-201ENST00000427423 339 ntBASIC4.98□□□□□ -1.61
VARS2Q5ST30 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.98□□□□□ -1.61
VARS2Q5ST30 AC109327.1-201ENST00000471666 403 ntBASIC4.98□□□□□ -1.61
VARS2Q5ST30 AC034229.5-201ENST00000624258 185 ntBASIC4.98□□□□□ -1.61
VARS2Q5ST30 MIR548BB-201ENST00000626714 66 ntBASIC4.98□□□□□ -1.61
VARS2Q5ST30 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
VARS2Q5ST30 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
VARS2Q5ST30 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.98□□□□□ -1.61
VARS2Q5ST30 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VARS2Q5ST30 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.98□□□□□ -1.61
VARS2Q5ST30 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VARS2Q5ST30 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
VARS2Q5ST30 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
VARS2Q5ST30 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.97□□□□□ -1.61
VARS2Q5ST30 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VARS2Q5ST30 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.97□□□□□ -1.61
VARS2Q5ST30 OR56B2P-202ENST00000641377 2453 ntBASIC4.97□□□□□ -1.61
VARS2Q5ST30 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
VARS2Q5ST30 RNU6-888P-201ENST00000363010 101 ntBASIC4.97□□□□□ -1.61
VARS2Q5ST30 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VARS2Q5ST30 RNU6-146P-201ENST00000384602 108 ntBASIC4.97□□□□□ -1.61
VARS2Q5ST30 MIR586-201ENST00000385035 97 ntBASIC4.97□□□□□ -1.61
VARS2Q5ST30 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.97□□□□□ -1.61
VARS2Q5ST30 EIF4A1P3-201ENST00000411521 244 ntBASIC4.97□□□□□ -1.61
VARS2Q5ST30 HMGN2P20-201ENST00000437531 273 ntBASIC4.97□□□□□ -1.61
VARS2Q5ST30 NDUFA4P2-201ENST00000489989 244 ntBASIC4.97□□□□□ -1.61
VARS2Q5ST30 AC022523.2-201ENST00000561045 150 ntBASIC4.97□□□□□ -1.61
VARS2Q5ST30 AC106785.1-201ENST00000565935 262 ntBASIC4.97□□□□□ -1.61
VARS2Q5ST30 SMG1P4-204ENST00000523028 4131 ntBASIC4.97□□□□□ -1.61
VARS2Q5ST30 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VARS2Q5ST30 OR14L1P-202ENST00000641545 3009 ntBASIC4.97□□□□□ -1.61
VARS2Q5ST30 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms