Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 SNORD115-16-201ENST00000363887 82 ntBASIC6.88□□□□□ -1.31
NCBP3Q53F19 SNORD115-1-201ENST00000364961 82 ntBASIC6.88□□□□□ -1.31
NCBP3Q53F19 RPL23AP48-201ENST00000406913 488 ntBASIC6.88□□□□□ -1.31
NCBP3Q53F19 RNA5SP73-201ENST00000516744 108 ntBASIC6.88□□□□□ -1.31
NCBP3Q53F19 RNA5SP230-201ENST00000517039 122 ntBASIC6.88□□□□□ -1.31
NCBP3Q53F19 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
NCBP3Q53F19 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC6.88□□□□□ -1.31
NCBP3Q53F19 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC6.88□□□□□ -1.31
NCBP3Q53F19 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.88□□□□□ -1.31
NCBP3Q53F19 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
NCBP3Q53F19 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
NCBP3Q53F19 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NCBP3Q53F19 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
NCBP3Q53F19 Y_RNA.155-201ENST00000363632 101 ntBASIC6.87□□□□□ -1.31
NCBP3Q53F19 Y_RNA.242-201ENST00000364473 110 ntBASIC6.87□□□□□ -1.31
NCBP3Q53F19 RNU6-438P-201ENST00000365561 103 ntBASIC6.87□□□□□ -1.31
NCBP3Q53F19 SNORA5.1-201ENST00000384275 131 ntBASIC6.87□□□□□ -1.31
NCBP3Q53F19 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC6.87□□□□□ -1.31
NCBP3Q53F19 SCGB1D5P-201ENST00000515134 247 ntBASIC6.87□□□□□ -1.31
NCBP3Q53F19 RN7SKP260-201ENST00000516907 149 ntBASIC6.87□□□□□ -1.31
NCBP3Q53F19 TBCA-207ENST00000520039 157 ntTSL 3 BASIC6.87□□□□□ -1.31
NCBP3Q53F19 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.87□□□□□ -1.31
NCBP3Q53F19 AC112198.2-201ENST00000426589 6996 ntBASIC6.87□□□□□ -1.31
NCBP3Q53F19 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC6.87□□□□□ -1.31
NCBP3Q53F19 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC6.86□□□□□ -1.31
NCBP3Q53F19 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
NCBP3Q53F19 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NCBP3Q53F19 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NCBP3Q53F19 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
NCBP3Q53F19 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
NCBP3Q53F19 RNA5SP502-201ENST00000362694 119 ntBASIC6.86□□□□□ -1.31
NCBP3Q53F19 RNU6-832P-201ENST00000363319 107 ntBASIC6.86□□□□□ -1.31
NCBP3Q53F19 AC009127.1-201ENST00000467090 155 ntBASIC6.86□□□□□ -1.31
NCBP3Q53F19 RN7SL441P-201ENST00000492388 296 ntBASIC6.86□□□□□ -1.31
NCBP3Q53F19 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC6.86□□□□□ -1.31
NCBP3Q53F19 MIR4694-201ENST00000578534 80 ntBASIC6.86□□□□□ -1.31
NCBP3Q53F19 AC011447.4-201ENST00000587562 111 ntBASIC6.86□□□□□ -1.31
NCBP3Q53F19 uc_338.32-201ENST00000615087 172 ntBASIC6.86□□□□□ -1.31
NCBP3Q53F19 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC6.86□□□□□ -1.31
NCBP3Q53F19 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
NCBP3Q53F19 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NCBP3Q53F19 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC6.85□□□□□ -1.31
NCBP3Q53F19 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NCBP3Q53F19 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NCBP3Q53F19 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.85□□□□□ -1.31
NCBP3Q53F19 MIR577-201ENST00000385196 96 ntBASIC6.85□□□□□ -1.31
NCBP3Q53F19 AC097463.2-201ENST00000421074 142 ntBASIC6.85□□□□□ -1.31
NCBP3Q53F19 MRPL35P3-201ENST00000421557 364 ntBASIC6.85□□□□□ -1.31
NCBP3Q53F19 AC012671.1-201ENST00000451912 203 ntBASIC6.85□□□□□ -1.31
NCBP3Q53F19 AP002884.2-201ENST00000471647 395 ntBASIC6.85□□□□□ -1.31
NCBP3Q53F19 RNU2-35P-201ENST00000516446 142 ntBASIC6.85□□□□□ -1.31
NCBP3Q53F19 MIR6719-201ENST00000622428 87 ntBASIC6.85□□□□□ -1.31
NCBP3Q53F19 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC6.85□□□□□ -1.31
NCBP3Q53F19 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.85□□□□□ -1.31
NCBP3Q53F19 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.85□□□□□ -1.31
NCBP3Q53F19 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6.85□□□□□ -1.31
NCBP3Q53F19 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC6.85□□□□□ -1.31
NCBP3Q53F19 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
NCBP3Q53F19 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NCBP3Q53F19 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
NCBP3Q53F19 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
NCBP3Q53F19 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NCBP3Q53F19 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.84□□□□□ -1.31
NCBP3Q53F19 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NCBP3Q53F19 RN7SL738P-201ENST00000470264 297 ntBASIC6.84□□□□□ -1.31
NCBP3Q53F19 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC6.84□□□□□ -1.31
NCBP3Q53F19 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
NCBP3Q53F19 AC073413.2-201ENST00000604332 360 ntBASIC6.84□□□□□ -1.31
NCBP3Q53F19 RPSAP73-201ENST00000614820 330 ntBASIC6.84□□□□□ -1.31
NCBP3Q53F19 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
NCBP3Q53F19 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
NCBP3Q53F19 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
NCBP3Q53F19 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
NCBP3Q53F19 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC6.84□□□□□ -1.31
NCBP3Q53F19 INTS6P1-201ENST00000504674 2530 ntBASIC6.84□□□□□ -1.31
NCBP3Q53F19 AC002546.1-201ENST00000588041 2504 ntBASIC6.84□□□□□ -1.31
NCBP3Q53F19 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
NCBP3Q53F19 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC6.84□□□□□ -1.32
NCBP3Q53F19 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
NCBP3Q53F19 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC6.84□□□□□ -1.32
NCBP3Q53F19 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
NCBP3Q53F19 AP002512.4-202ENST00000641599 4530 ntBASIC6.83□□□□□ -1.32
NCBP3Q53F19 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NCBP3Q53F19 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
NCBP3Q53F19 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
NCBP3Q53F19 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NCBP3Q53F19 Y_RNA.454-201ENST00000384224 113 ntBASIC6.83□□□□□ -1.32
NCBP3Q53F19 MIR3074-201ENST00000384885 81 ntBASIC6.83□□□□□ -1.32
NCBP3Q53F19 MIR548O-201ENST00000408583 114 ntBASIC6.83□□□□□ -1.32
NCBP3Q53F19 Z98742.2-201ENST00000431564 187 ntBASIC6.83□□□□□ -1.32
NCBP3Q53F19 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.83□□□□□ -1.32
NCBP3Q53F19 RNU7-23P-201ENST00000459465 62 ntBASIC6.83□□□□□ -1.32
NCBP3Q53F19 IGLVIV-65-201ENST00000517313 360 ntBASIC6.83□□□□□ -1.32
NCBP3Q53F19 uc_338.14-201ENST00000613162 166 ntBASIC6.83□□□□□ -1.32
NCBP3Q53F19 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
NCBP3Q53F19 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC6.83□□□□□ -1.32
NCBP3Q53F19 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.83□□□□□ -1.32
NCBP3Q53F19 BCORP1-203ENST00000513194 5093 ntBASIC6.83□□□□□ -1.32
NCBP3Q53F19 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC6.83□□□□□ -1.32
NCBP3Q53F19 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms