Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.16□□□□□ -1.9
PDCD4Q53EL6 AL590664.1-201ENST00000448065 339 ntBASIC3.16□□□□□ -1.9
PDCD4Q53EL6 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.16□□□□□ -1.9
PDCD4Q53EL6 AC087477.1-201ENST00000465747 340 ntBASIC3.16□□□□□ -1.9
PDCD4Q53EL6 AC006445.2-201ENST00000510061 472 ntBASIC3.16□□□□□ -1.9
PDCD4Q53EL6 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.16□□□□□ -1.9
PDCD4Q53EL6 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.16□□□□□ -1.9
PDCD4Q53EL6 SNORA31.6-201ENST00000516241 130 ntBASIC3.16□□□□□ -1.9
PDCD4Q53EL6 SNORA31.23-201ENST00000517219 133 ntBASIC3.16□□□□□ -1.9
PDCD4Q53EL6 AC022868.1-201ENST00000517767 391 ntBASIC3.16□□□□□ -1.9
PDCD4Q53EL6 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.16□□□□□ -1.9
PDCD4Q53EL6 IGKV2-26-201ENST00000518305 343 ntBASIC3.16□□□□□ -1.9
PDCD4Q53EL6 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.16□□□□□ -1.9
PDCD4Q53EL6 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.16□□□□□ -1.9
PDCD4Q53EL6 AC021739.1-201ENST00000559631 174 ntBASIC3.16□□□□□ -1.9
PDCD4Q53EL6 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.16□□□□□ -1.9
PDCD4Q53EL6 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
PDCD4Q53EL6 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PDCD4Q53EL6 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PDCD4Q53EL6 AC110491.1-201ENST00000562191 2010 ntBASIC3.15□□□□□ -1.9
PDCD4Q53EL6 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.9
PDCD4Q53EL6 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.15□□□□□ -1.9
PDCD4Q53EL6 RNU6-858P-201ENST00000362436 107 ntBASIC3.15□□□□□ -1.91
PDCD4Q53EL6 SNORD81.1-201ENST00000363064 77 ntBASIC3.15□□□□□ -1.91
PDCD4Q53EL6 Y_RNA.416-201ENST00000384014 113 ntBASIC3.15□□□□□ -1.91
PDCD4Q53EL6 SNORA1.3-201ENST00000384676 136 ntBASIC3.15□□□□□ -1.91
PDCD4Q53EL6 RNA5SP213-201ENST00000391031 106 ntBASIC3.15□□□□□ -1.91
PDCD4Q53EL6 AL079342.1-201ENST00000401460 267 ntBASIC3.15□□□□□ -1.91
PDCD4Q53EL6 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.15□□□□□ -1.91
PDCD4Q53EL6 AC016700.2-201ENST00000446011 156 ntBASIC3.15□□□□□ -1.91
PDCD4Q53EL6 MED28P2-201ENST00000475771 317 ntBASIC3.15□□□□□ -1.91
PDCD4Q53EL6 RPS23P5-201ENST00000495419 428 ntBASIC3.15□□□□□ -1.91
PDCD4Q53EL6 RNU6-581P-201ENST00000516214 105 ntBASIC3.15□□□□□ -1.91
PDCD4Q53EL6 CKS1BP7-201ENST00000522230 235 ntBASIC3.15□□□□□ -1.91
PDCD4Q53EL6 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.15□□□□□ -1.91
PDCD4Q53EL6 AC009163.5-201ENST00000575421 637 ntBASIC3.15□□□□□ -1.91
PDCD4Q53EL6 MIR5571-201ENST00000577998 113 ntBASIC3.15□□□□□ -1.91
PDCD4Q53EL6 MIR3609-201ENST00000582661 80 ntBASIC3.15□□□□□ -1.91
PDCD4Q53EL6 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.15□□□□□ -1.91
PDCD4Q53EL6 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.15□□□□□ -1.91
PDCD4Q53EL6 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PDCD4Q53EL6 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PDCD4Q53EL6 AL391987.6-201ENST00000305671 199 ntBASIC3.14□□□□□ -1.91
PDCD4Q53EL6 RNU4-35P-201ENST00000362588 141 ntBASIC3.14□□□□□ -1.91
PDCD4Q53EL6 Y_RNA.143-201ENST00000363520 106 ntBASIC3.14□□□□□ -1.91
PDCD4Q53EL6 Y_RNA.237-201ENST00000364439 102 ntBASIC3.14□□□□□ -1.91
PDCD4Q53EL6 RNU6-1141P-201ENST00000364520 107 ntBASIC3.14□□□□□ -1.91
PDCD4Q53EL6 MIR544A-201ENST00000384855 91 ntBASIC3.14□□□□□ -1.91
PDCD4Q53EL6 RPS4XP3-201ENST00000398541 413 ntBASIC3.14□□□□□ -1.91
PDCD4Q53EL6 AL591034.1-201ENST00000407447 340 ntBASIC3.14□□□□□ -1.91
PDCD4Q53EL6 CYCSP19-201ENST00000411715 316 ntBASIC3.14□□□□□ -1.91
PDCD4Q53EL6 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.14□□□□□ -1.91
PDCD4Q53EL6 SSXP4-201ENST00000451349 245 ntBASIC3.14□□□□□ -1.91
PDCD4Q53EL6 AP000870.1-201ENST00000472927 406 ntBASIC3.14□□□□□ -1.91
PDCD4Q53EL6 AC025518.1-201ENST00000479856 347 ntBASIC3.14□□□□□ -1.91
PDCD4Q53EL6 AP001025.1-201ENST00000486139 332 ntBASIC3.14□□□□□ -1.91
PDCD4Q53EL6 HMGB1P35-201ENST00000503360 598 ntBASIC3.14□□□□□ -1.91
PDCD4Q53EL6 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.14□□□□□ -1.91
PDCD4Q53EL6 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.14□□□□□ -1.91
PDCD4Q53EL6 RNU6-1114P-201ENST00000516022 107 ntBASIC3.14□□□□□ -1.91
PDCD4Q53EL6 RNU1-95P-201ENST00000516357 160 ntBASIC3.14□□□□□ -1.91
PDCD4Q53EL6 RNU1-128P-201ENST00000516704 160 ntBASIC3.14□□□□□ -1.91
PDCD4Q53EL6 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.14□□□□□ -1.91
PDCD4Q53EL6 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.14□□□□□ -1.91
PDCD4Q53EL6 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.14□□□□□ -1.91
PDCD4Q53EL6 MIR4659A-201ENST00000580269 81 ntBASIC3.14□□□□□ -1.91
PDCD4Q53EL6 AC024220.1-201ENST00000603675 484 ntBASIC3.14□□□□□ -1.91
PDCD4Q53EL6 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.14□□□□□ -1.91
PDCD4Q53EL6 AC137590.2-201ENST00000619709 240 ntBASIC3.14□□□□□ -1.91
PDCD4Q53EL6 AC073308.1-201ENST00000623696 305 ntBASIC3.14□□□□□ -1.91
PDCD4Q53EL6 MIR3529-201ENST00000637713 78 ntBASIC3.14□□□□□ -1.91
PDCD4Q53EL6 HAUS6P2-201ENST00000433254 2404 ntBASIC3.14□□□□□ -1.91
PDCD4Q53EL6 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.14□□□□□ -1.91
PDCD4Q53EL6 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.13□□□□□ -1.91
PDCD4Q53EL6 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.13□□□□□ -1.91
PDCD4Q53EL6 ADAM3A-203ENST00000461344 2157 ntBASIC3.13□□□□□ -1.91
PDCD4Q53EL6 RNU6-318P-201ENST00000384283 103 ntBASIC3.13□□□□□ -1.91
PDCD4Q53EL6 RNU6-843P-201ENST00000384454 104 ntBASIC3.13□□□□□ -1.91
PDCD4Q53EL6 Y_RNA.581-201ENST00000391017 97 ntBASIC3.13□□□□□ -1.91
PDCD4Q53EL6 MIR548I3-201ENST00000408378 149 ntBASIC3.13□□□□□ -1.91
PDCD4Q53EL6 MIR548I1-201ENST00000408810 149 ntBASIC3.13□□□□□ -1.91
PDCD4Q53EL6 RN7SKP61-201ENST00000410642 295 ntBASIC3.13□□□□□ -1.91
PDCD4Q53EL6 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.13□□□□□ -1.91
PDCD4Q53EL6 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.13□□□□□ -1.91
PDCD4Q53EL6 AC016632.1-201ENST00000503994 196 ntBASIC3.13□□□□□ -1.91
PDCD4Q53EL6 AC104619.4-201ENST00000510773 249 ntBASIC3.13□□□□□ -1.91
PDCD4Q53EL6 RNU6-111P-201ENST00000517179 105 ntBASIC3.13□□□□□ -1.91
PDCD4Q53EL6 AC006199.1-201ENST00000548728 219 ntBASIC3.13□□□□□ -1.91
PDCD4Q53EL6 HSPE1P4-201ENST00000550617 308 ntBASIC3.13□□□□□ -1.91
PDCD4Q53EL6 AC023824.2-201ENST00000566185 400 ntBASIC3.13□□□□□ -1.91
PDCD4Q53EL6 AL109918.3-201ENST00000603072 338 ntBASIC3.13□□□□□ -1.91
PDCD4Q53EL6 HSPE1P7-201ENST00000604681 321 ntBASIC3.13□□□□□ -1.91
PDCD4Q53EL6 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.13□□□□□ -1.91
PDCD4Q53EL6 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
PDCD4Q53EL6 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.13□□□□□ -1.91
PDCD4Q53EL6 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PDCD4Q53EL6 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
PDCD4Q53EL6 RNU6-137P-201ENST00000363680 108 ntBASIC3.12□□□□□ -1.91
PDCD4Q53EL6 RNU6-487P-201ENST00000365430 104 ntBASIC3.12□□□□□ -1.91
PDCD4Q53EL6 U8.10-201ENST00000384260 133 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms