Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
SHROOM1Q2M3G4 SNORA69-201ENST00000383895 132 ntBASIC2.07□□□□□ -2.08
SHROOM1Q2M3G4 MTCO3P40-201ENST00000392516 676 ntBASIC2.07□□□□□ -2.08
SHROOM1Q2M3G4 RNA5SP489-201ENST00000410986 109 ntBASIC2.07□□□□□ -2.08
SHROOM1Q2M3G4 RNU6-293P-201ENST00000411259 106 ntBASIC2.07□□□□□ -2.08
SHROOM1Q2M3G4 HMGN2P19-201ENST00000425149 265 ntBASIC2.07□□□□□ -2.08
SHROOM1Q2M3G4 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.07□□□□□ -2.08
SHROOM1Q2M3G4 RPL39P29-201ENST00000447779 157 ntBASIC2.07□□□□□ -2.08
SHROOM1Q2M3G4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.07□□□□□ -2.08
SHROOM1Q2M3G4 SNORA40.12-201ENST00000516329 111 ntBASIC2.07□□□□□ -2.08
SHROOM1Q2M3G4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.07□□□□□ -2.08
SHROOM1Q2M3G4 AC104383.1-201ENST00000530297 370 ntBASIC2.07□□□□□ -2.08
SHROOM1Q2M3G4 AC022880.1-201ENST00000534017 973 ntBASIC2.07□□□□□ -2.08
SHROOM1Q2M3G4 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.07□□□□□ -2.08
SHROOM1Q2M3G4 AC023050.3-201ENST00000541142 333 ntBASIC2.07□□□□□ -2.08
SHROOM1Q2M3G4 AC103996.1-201ENST00000555468 102 ntBASIC2.07□□□□□ -2.08
SHROOM1Q2M3G4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.07□□□□□ -2.08
SHROOM1Q2M3G4 SNRPGP17-201ENST00000603780 214 ntBASIC2.07□□□□□ -2.08
SHROOM1Q2M3G4 AC017083.3-201ENST00000609955 700 ntBASIC2.07□□□□□ -2.08
SHROOM1Q2M3G4 U2.17-201ENST00000611454 95 ntBASIC2.07□□□□□ -2.08
SHROOM1Q2M3G4 HULC.1-201ENST00000612720 240 ntBASIC2.07□□□□□ -2.08
SHROOM1Q2M3G4 AC022202.1-201ENST00000613515 211 ntBASIC2.07□□□□□ -2.08
SHROOM1Q2M3G4 U4.7-201ENST00000638126 106 ntBASIC2.07□□□□□ -2.08
SHROOM1Q2M3G4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SHROOM1Q2M3G4 snoU2_19.1-201ENST00000362361 80 ntBASIC2.06□□□□□ -2.08
SHROOM1Q2M3G4 RNU6-1010P-201ENST00000362757 107 ntBASIC2.06□□□□□ -2.08
SHROOM1Q2M3G4 RNU1-23P-201ENST00000363361 144 ntBASIC2.06□□□□□ -2.08
SHROOM1Q2M3G4 SNORA16.1-201ENST00000364597 132 ntBASIC2.06□□□□□ -2.08
SHROOM1Q2M3G4 RNU4-66P-201ENST00000365199 138 ntBASIC2.06□□□□□ -2.08
SHROOM1Q2M3G4 MIR29C-201ENST00000385231 88 ntBASIC2.06□□□□□ -2.08
SHROOM1Q2M3G4 MIR676-201ENST00000390702 67 ntBASIC2.06□□□□□ -2.08
SHROOM1Q2M3G4 MTCO3P41-201ENST00000414801 328 ntBASIC2.06□□□□□ -2.08
SHROOM1Q2M3G4 BTF3P4-201ENST00000418852 495 ntBASIC2.06□□□□□ -2.08
SHROOM1Q2M3G4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.06□□□□□ -2.08
SHROOM1Q2M3G4 MTND2P29-201ENST00000438595 412 ntBASIC2.06□□□□□ -2.08
SHROOM1Q2M3G4 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.06□□□□□ -2.08
SHROOM1Q2M3G4 RNU7-167P-201ENST00000459160 62 ntBASIC2.06□□□□□ -2.08
SHROOM1Q2M3G4 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.06□□□□□ -2.08
SHROOM1Q2M3G4 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.06□□□□□ -2.08
SHROOM1Q2M3G4 AC105313.1-201ENST00000509121 353 ntBASIC2.06□□□□□ -2.08
SHROOM1Q2M3G4 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.06□□□□□ -2.08
SHROOM1Q2M3G4 AC009646.1-201ENST00000510455 318 ntBASIC2.06□□□□□ -2.08
SHROOM1Q2M3G4 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.06□□□□□ -2.08
SHROOM1Q2M3G4 RNU1-40P-201ENST00000516816 164 ntBASIC2.06□□□□□ -2.08
SHROOM1Q2M3G4 RNU1-97P-201ENST00000516872 164 ntBASIC2.06□□□□□ -2.08
SHROOM1Q2M3G4 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.06□□□□□ -2.08
SHROOM1Q2M3G4 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.06□□□□□ -2.08
SHROOM1Q2M3G4 AL118558.2-201ENST00000556294 238 ntBASIC2.06□□□□□ -2.08
SHROOM1Q2M3G4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.06□□□□□ -2.08
SHROOM1Q2M3G4 MIR4299-201ENST00000577899 72 ntBASIC2.06□□□□□ -2.08
SHROOM1Q2M3G4 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.06□□□□□ -2.08
SHROOM1Q2M3G4 AC078795.2-201ENST00000602835 1252 ntBASIC2.06□□□□□ -2.08
SHROOM1Q2M3G4 RNU6-85P-201ENST00000605989 107 ntBASIC2.06□□□□□ -2.08
SHROOM1Q2M3G4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SHROOM1Q2M3G4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
SHROOM1Q2M3G4 RNU6-655P-201ENST00000362858 107 ntBASIC2.05□□□□□ -2.08
SHROOM1Q2M3G4 RNU6-1085P-201ENST00000363576 107 ntBASIC2.05□□□□□ -2.08
SHROOM1Q2M3G4 RNU6-105P-201ENST00000363909 104 ntBASIC2.05□□□□□ -2.08
SHROOM1Q2M3G4 RNU6-336P-201ENST00000364891 107 ntBASIC2.05□□□□□ -2.08
SHROOM1Q2M3G4 RNU6-827P-201ENST00000365553 106 ntBASIC2.05□□□□□ -2.08
SHROOM1Q2M3G4 RNU6-692P-201ENST00000384496 107 ntBASIC2.05□□□□□ -2.08
SHROOM1Q2M3G4 SNORD73A-201ENST00000386062 65 ntBASIC2.05□□□□□ -2.08
SHROOM1Q2M3G4 RNA5SP212-201ENST00000391223 107 ntBASIC2.05□□□□□ -2.08
SHROOM1Q2M3G4 POLHP1-201ENST00000411806 470 ntBASIC2.05□□□□□ -2.08
SHROOM1Q2M3G4 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
SHROOM1Q2M3G4 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.05□□□□□ -2.08
SHROOM1Q2M3G4 Z82205.1-201ENST00000428456 297 ntBASIC2.05□□□□□ -2.08
SHROOM1Q2M3G4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.05□□□□□ -2.08
SHROOM1Q2M3G4 AC007969.2-201ENST00000441891 191 ntBASIC2.05□□□□□ -2.08
SHROOM1Q2M3G4 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.05□□□□□ -2.08
SHROOM1Q2M3G4 MTCO3P38-201ENST00000468910 766 ntBASIC2.05□□□□□ -2.08
SHROOM1Q2M3G4 AC034114.1-201ENST00000520293 285 ntBASIC2.05□□□□□ -2.08
SHROOM1Q2M3G4 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.05□□□□□ -2.08
SHROOM1Q2M3G4 OR11H5P-201ENST00000554039 926 ntBASIC2.05□□□□□ -2.08
SHROOM1Q2M3G4 AC016727.1-205ENST00000605437 569 ntBASIC2.05□□□□□ -2.08
SHROOM1Q2M3G4 AP001330.5-201ENST00000607176 411 ntBASIC2.05□□□□□ -2.08
SHROOM1Q2M3G4 AF250324.2-201ENST00000608299 610 ntBASIC2.05□□□□□ -2.08
SHROOM1Q2M3G4 AC092954.2-201ENST00000609103 430 ntBASIC2.05□□□□□ -2.08
SHROOM1Q2M3G4 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SHROOM1Q2M3G4 AC063943.3-201ENST00000615562 356 ntBASIC2.05□□□□□ -2.08
SHROOM1Q2M3G4 AC098657.3-201ENST00000620434 263 ntBASIC2.05□□□□□ -2.08
SHROOM1Q2M3G4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SHROOM1Q2M3G4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
SHROOM1Q2M3G4 Y_RNA.238-201ENST00000364441 102 ntBASIC2.04□□□□□ -2.08
SHROOM1Q2M3G4 SNORA25B-201ENST00000365507 128 ntBASIC2.04□□□□□ -2.08
SHROOM1Q2M3G4 Y_RNA.480-201ENST00000384364 102 ntBASIC2.04□□□□□ -2.08
SHROOM1Q2M3G4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
SHROOM1Q2M3G4 RNA5SP390-201ENST00000410191 113 ntBASIC2.04□□□□□ -2.08
SHROOM1Q2M3G4 RNU2-23P-201ENST00000410545 195 ntBASIC2.04□□□□□ -2.08
SHROOM1Q2M3G4 AC244636.1-201ENST00000421152 228 ntBASIC2.04□□□□□ -2.08
SHROOM1Q2M3G4 HAUS6P2-201ENST00000433254 2404 ntBASIC2.04□□□□□ -2.08
SHROOM1Q2M3G4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.04□□□□□ -2.08
SHROOM1Q2M3G4 AC243964.1-201ENST00000441814 261 ntBASIC2.04□□□□□ -2.08
SHROOM1Q2M3G4 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.04□□□□□ -2.08
SHROOM1Q2M3G4 AL353752.1-201ENST00000454946 260 ntBASIC2.04□□□□□ -2.08
SHROOM1Q2M3G4 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.04□□□□□ -2.08
SHROOM1Q2M3G4 TPTE2P5-203ENST00000458118 728 ntBASIC2.04□□□□□ -2.08
SHROOM1Q2M3G4 AL121594.1-201ENST00000475906 575 ntBASIC2.04□□□□□ -2.08
SHROOM1Q2M3G4 HMGB1P35-201ENST00000503360 598 ntBASIC2.04□□□□□ -2.08
SHROOM1Q2M3G4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms