Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.65□□□□□ -1.67
USP46P62068 AC133485.4-201ENST00000561835 220 ntBASIC4.65□□□□□ -1.67
USP46P62068 AC138907.4-201ENST00000570107 226 ntBASIC4.65□□□□□ -1.67
USP46P62068 AC091178.1-203ENST00000584586 279 ntBASIC4.65□□□□□ -1.67
USP46P62068 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.65□□□□□ -1.67
USP46P62068 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.65□□□□□ -1.67
USP46P62068 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
USP46P62068 AC069528.2-201ENST00000624849 1991 ntBASIC4.65□□□□□ -1.67
USP46P62068 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
USP46P62068 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
USP46P62068 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
USP46P62068 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
USP46P62068 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
USP46P62068 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
USP46P62068 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
USP46P62068 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
USP46P62068 RNU6-1210P-201ENST00000363775 107 ntBASIC4.64□□□□□ -1.67
USP46P62068 RNA5SP513-201ENST00000364648 118 ntBASIC4.64□□□□□ -1.67
USP46P62068 AP002088.1-201ENST00000382740 395 ntBASIC4.64□□□□□ -1.67
USP46P62068 RNU1-63P-201ENST00000383902 164 ntBASIC4.64□□□□□ -1.67
USP46P62068 RNU6-1080P-201ENST00000383982 107 ntBASIC4.64□□□□□ -1.67
USP46P62068 SNORA40.5-201ENST00000391061 128 ntBASIC4.64□□□□□ -1.67
USP46P62068 Y_RNA.587-201ENST00000391210 103 ntBASIC4.64□□□□□ -1.67
USP46P62068 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.64□□□□□ -1.67
USP46P62068 RPL23AP52-201ENST00000439311 478 ntBASIC4.64□□□□□ -1.67
USP46P62068 AC146944.2-203ENST00000502493 354 ntBASIC4.64□□□□□ -1.67
USP46P62068 AC139495.1-202ENST00000513164 354 ntBASIC4.64□□□□□ -1.67
USP46P62068 Y_RNA.692-201ENST00000516627 105 ntBASIC4.64□□□□□ -1.67
USP46P62068 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
USP46P62068 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.64□□□□□ -1.67
USP46P62068 ATP5J2P6-201ENST00000565203 266 ntBASIC4.64□□□□□ -1.67
USP46P62068 POLR3GP1-201ENST00000594073 261 ntBASIC4.64□□□□□ -1.67
USP46P62068 AC012493.2-201ENST00000595083 291 ntBASIC4.64□□□□□ -1.67
USP46P62068 HSPE1P7-201ENST00000604681 321 ntBASIC4.64□□□□□ -1.67
USP46P62068 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
USP46P62068 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
USP46P62068 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
USP46P62068 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
USP46P62068 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
USP46P62068 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.63□□□□□ -1.67
USP46P62068 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
USP46P62068 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
USP46P62068 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
USP46P62068 RNU1-132P-201ENST00000364300 164 ntBASIC4.63□□□□□ -1.67
USP46P62068 MIR3065-201ENST00000390137 79 ntBASIC4.63□□□□□ -1.67
USP46P62068 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.63□□□□□ -1.67
USP46P62068 SNORD33.1-201ENST00000516213 88 ntBASIC4.63□□□□□ -1.67
USP46P62068 RNU6-1337P-201ENST00000516525 95 ntBASIC4.63□□□□□ -1.67
USP46P62068 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.63□□□□□ -1.67
USP46P62068 MIR3121-201ENST00000579680 77 ntBASIC4.63□□□□□ -1.67
USP46P62068 AC079587.1-201ENST00000603846 277 ntBASIC4.63□□□□□ -1.67
USP46P62068 AC113403.1-201ENST00000604910 193 ntBASIC4.63□□□□□ -1.67
USP46P62068 RNU1-30P-201ENST00000606575 163 ntBASIC4.63□□□□□ -1.67
USP46P62068 MIR6716-201ENST00000613413 80 ntBASIC4.63□□□□□ -1.67
USP46P62068 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
USP46P62068 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
USP46P62068 AC011266.1-201ENST00000624119 3569 ntBASIC4.63□□□□□ -1.67
USP46P62068 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.63□□□□□ -1.67
USP46P62068 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
USP46P62068 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.63□□□□□ -1.67
USP46P62068 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
USP46P62068 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.62□□□□□ -1.67
USP46P62068 RNA5SP502-201ENST00000362694 119 ntBASIC4.62□□□□□ -1.67
USP46P62068 U8.1-201ENST00000362843 134 ntBASIC4.62□□□□□ -1.67
USP46P62068 SNORD116-13-201ENST00000384408 92 ntBASIC4.62□□□□□ -1.67
USP46P62068 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
USP46P62068 RNA5SP89-201ENST00000410300 108 ntBASIC4.62□□□□□ -1.67
USP46P62068 AC004552.1-201ENST00000419089 348 ntBASIC4.62□□□□□ -1.67
USP46P62068 Z82209.1-201ENST00000422141 2135 ntBASIC4.62□□□□□ -1.67
USP46P62068 RPS26P3-201ENST00000470205 348 ntBASIC4.62□□□□□ -1.67
USP46P62068 AC090543.2-201ENST00000483963 348 ntBASIC4.62□□□□□ -1.67
USP46P62068 AC004057.1-201ENST00000485827 348 ntBASIC4.62□□□□□ -1.67
USP46P62068 RPL23AP54-201ENST00000495129 419 ntBASIC4.62□□□□□ -1.67
USP46P62068 RNA5SP497-201ENST00000516081 97 ntBASIC4.62□□□□□ -1.67
USP46P62068 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.62□□□□□ -1.67
USP46P62068 uc_338.13-201ENST00000618243 179 ntBASIC4.62□□□□□ -1.67
USP46P62068 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
USP46P62068 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
USP46P62068 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.62□□□□□ -1.67
USP46P62068 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.62□□□□□ -1.67
USP46P62068 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.62□□□□□ -1.67
USP46P62068 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
USP46P62068 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.62□□□□□ -1.67
USP46P62068 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
USP46P62068 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.61□□□□□ -1.67
USP46P62068 AL672296.1-201ENST00000427780 2158 ntBASIC4.61□□□□□ -1.67
USP46P62068 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
USP46P62068 MIR873-201ENST00000401120 77 ntBASIC4.61□□□□□ -1.67
USP46P62068 RPL23AP7-203ENST00000449021 469 ntBASIC4.61□□□□□ -1.67
USP46P62068 CENPBD1P1-201ENST00000464061 469 ntBASIC4.61□□□□□ -1.67
USP46P62068 RN7SL41P-201ENST00000476144 297 ntBASIC4.61□□□□□ -1.67
USP46P62068 AC091167.1-201ENST00000492017 396 ntBASIC4.61□□□□□ -1.67
USP46P62068 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.61□□□□□ -1.67
USP46P62068 RNU2-58P-201ENST00000516403 183 ntBASIC4.61□□□□□ -1.67
USP46P62068 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.61□□□□□ -1.67
USP46P62068 AP003357.1-201ENST00000604497 148 ntBASIC4.61□□□□□ -1.67
USP46P62068 AL160290.3-201ENST00000604869 165 ntBASIC4.61□□□□□ -1.67
USP46P62068 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
USP46P62068 AC091905.2-201ENST00000623143 306 ntBASIC4.61□□□□□ -1.67
USP46P62068 AC112484.5-201ENST00000624189 228 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms