Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AC087683.1-201ENST00000591187 441 ntBASIC1.94□□□□□ -2.1
SRP54P61011 AP000654.2-201ENST00000605633 586 ntBASIC1.94□□□□□ -2.1
SRP54P61011 AL354950.2-201ENST00000617939 290 ntBASIC1.94□□□□□ -2.1
SRP54P61011 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SRP54P61011 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SRP54P61011 AC092268.1-201ENST00000342691 405 ntBASIC1.93□□□□□ -2.1
SRP54P61011 RNU4-15P-201ENST00000362613 141 ntBASIC1.93□□□□□ -2.1
SRP54P61011 RNU4-56P-201ENST00000364700 142 ntBASIC1.93□□□□□ -2.1
SRP54P61011 MIR676-201ENST00000390702 67 ntBASIC1.93□□□□□ -2.1
SRP54P61011 SNORA26.3-201ENST00000391119 136 ntBASIC1.93□□□□□ -2.1
SRP54P61011 DEFB108C-201ENST00000400154 252 ntBASIC1.93□□□□□ -2.1
SRP54P61011 AL606923.1-201ENST00000406616 190 ntBASIC1.93□□□□□ -2.1
SRP54P61011 RNU4-55P-201ENST00000410731 137 ntBASIC1.93□□□□□ -2.1
SRP54P61011 AL353193.1-201ENST00000421444 268 ntBASIC1.93□□□□□ -2.1
SRP54P61011 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.93□□□□□ -2.1
SRP54P61011 RPL23AP95-201ENST00000426806 265 ntBASIC1.93□□□□□ -2.1
SRP54P61011 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.93□□□□□ -2.1
SRP54P61011 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.93□□□□□ -2.1
SRP54P61011 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.93□□□□□ -2.1
SRP54P61011 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.93□□□□□ -2.1
SRP54P61011 TPT1P7-201ENST00000458300 517 ntBASIC1.93□□□□□ -2.1
SRP54P61011 AC145146.1-201ENST00000496370 254 ntBASIC1.93□□□□□ -2.1
SRP54P61011 RNA5SP182-201ENST00000516064 82 ntBASIC1.93□□□□□ -2.1
SRP54P61011 SNORA40.12-201ENST00000516329 111 ntBASIC1.93□□□□□ -2.1
SRP54P61011 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.93□□□□□ -2.1
SRP54P61011 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.93□□□□□ -2.1
SRP54P61011 AC103996.1-201ENST00000555468 102 ntBASIC1.93□□□□□ -2.1
SRP54P61011 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.93□□□□□ -2.1
SRP54P61011 MIR4424-201ENST00000585257 86 ntBASIC1.93□□□□□ -2.1
SRP54P61011 AL096840.1-201ENST00000603287 93 ntBASIC1.93□□□□□ -2.1
SRP54P61011 AC017083.3-201ENST00000609955 700 ntBASIC1.93□□□□□ -2.1
SRP54P61011 MIR1248-201ENST00000629190 106 ntBASIC1.93□□□□□ -2.1
SRP54P61011 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
SRP54P61011 RNU6-1119P-201ENST00000384349 108 ntBASIC1.92□□□□□ -2.1
SRP54P61011 SNORA26.9-201ENST00000391322 122 ntBASIC1.92□□□□□ -2.1
SRP54P61011 AL590135.1-201ENST00000422215 156 ntBASIC1.92□□□□□ -2.1
SRP54P61011 AL445685.2-201ENST00000422551 342 ntBASIC1.92□□□□□ -2.1
SRP54P61011 AC019205.3-201ENST00000424573 156 ntBASIC1.92□□□□□ -2.1
SRP54P61011 AL133396.1-201ENST00000432048 687 ntBASIC1.92□□□□□ -2.1
SRP54P61011 AC016700.2-201ENST00000446011 156 ntBASIC1.92□□□□□ -2.1
SRP54P61011 RPL23AP7-203ENST00000449021 469 ntBASIC1.92□□□□□ -2.1
SRP54P61011 SNRPGP7-201ENST00000469016 106 ntBASIC1.92□□□□□ -2.1
SRP54P61011 AC015911.1-201ENST00000495111 156 ntBASIC1.92□□□□□ -2.1
SRP54P61011 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.92□□□□□ -2.1
SRP54P61011 AC093259.1-201ENST00000509755 300 ntBASIC1.92□□□□□ -2.1
SRP54P61011 RNU6-548P-201ENST00000517083 115 ntBASIC1.92□□□□□ -2.1
SRP54P61011 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.92□□□□□ -2.1
SRP54P61011 HSPE1P4-201ENST00000550617 308 ntBASIC1.92□□□□□ -2.1
SRP54P61011 AC110588.1-201ENST00000559699 137 ntBASIC1.92□□□□□ -2.1
SRP54P61011 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.92□□□□□ -2.1
SRP54P61011 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.92□□□□□ -2.1
SRP54P61011 AC011494.1-201ENST00000596454 237 ntBASIC1.92□□□□□ -2.1
SRP54P61011 AC243960.4-201ENST00000600532 288 ntBASIC1.92□□□□□ -2.1
SRP54P61011 AC010620.1-201ENST00000601088 1102 ntBASIC1.92□□□□□ -2.1
SRP54P61011 RNU6-85P-201ENST00000605989 107 ntBASIC1.92□□□□□ -2.1
SRP54P61011 AC245008.1-201ENST00000608123 476 ntBASIC1.92□□□□□ -2.1
SRP54P61011 HULC.1-201ENST00000612720 240 ntBASIC1.92□□□□□ -2.1
SRP54P61011 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
SRP54P61011 RNU1-58P-201ENST00000362413 163 ntBASIC1.91□□□□□ -2.1
SRP54P61011 RNU6-743P-201ENST00000364151 106 ntBASIC1.91□□□□□ -2.1
SRP54P61011 RNU6-1164P-201ENST00000364428 107 ntBASIC1.91□□□□□ -2.1
SRP54P61011 RNU6-1042P-201ENST00000384204 107 ntBASIC1.91□□□□□ -2.1
SRP54P61011 SNORA40.18-201ENST00000391200 128 ntBASIC1.91□□□□□ -2.1
SRP54P61011 MTCYBP2-201ENST00000407745 171 ntBASIC1.91□□□□□ -2.1
SRP54P61011 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.91□□□□□ -2.1
SRP54P61011 BX510359.4-201ENST00000423750 193 ntBASIC1.91□□□□□ -2.1
SRP54P61011 AL606489.2-201ENST00000433886 234 ntBASIC1.91□□□□□ -2.1
SRP54P61011 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.91□□□□□ -2.1
SRP54P61011 AC007677.1-201ENST00000445757 515 ntBASIC1.91□□□□□ -2.1
SRP54P61011 AL021397.1-201ENST00000451806 248 ntBASIC1.91□□□□□ -2.1
SRP54P61011 RNU6-333P-201ENST00000459117 107 ntBASIC1.91□□□□□ -2.1
SRP54P61011 RNU7-138P-201ENST00000459479 64 ntBASIC1.91□□□□□ -2.1
SRP54P61011 AC025033.1-201ENST00000463883 194 ntBASIC1.91□□□□□ -2.1
SRP54P61011 RN7SL274P-201ENST00000492268 272 ntBASIC1.91□□□□□ -2.1
SRP54P61011 CCDC34P1-201ENST00000507441 517 ntBASIC1.91□□□□□ -2.1
SRP54P61011 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.91□□□□□ -2.1
SRP54P61011 MRPS17P9-201ENST00000511924 393 ntBASIC1.91□□□□□ -2.1
SRP54P61011 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.91□□□□□ -2.1
SRP54P61011 MIR4299-201ENST00000577899 72 ntBASIC1.91□□□□□ -2.1
SRP54P61011 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.91□□□□□ -2.1
SRP54P61011 MIR3611-201ENST00000584484 83 ntBASIC1.91□□□□□ -2.1
SRP54P61011 SNRPGP19-201ENST00000603826 189 ntBASIC1.91□□□□□ -2.1
SRP54P61011 AP001330.5-201ENST00000607176 411 ntBASIC1.91□□□□□ -2.1
SRP54P61011 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.91□□□□□ -2.1
SRP54P61011 MIR6845-201ENST00000613182 61 ntBASIC1.91□□□□□ -2.1
SRP54P61011 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.91□□□□□ -2.1
SRP54P61011 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.91□□□□□ -2.1
SRP54P61011 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.9□□□□□ -2.11
SRP54P61011 RNA5SP160-201ENST00000364866 120 ntBASIC1.9□□□□□ -2.11
SRP54P61011 SNORA8-201ENST00000384574 139 ntBASIC1.9□□□□□ -2.11
SRP54P61011 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SRP54P61011 AL357139.1-201ENST00000407792 426 ntBASIC1.9□□□□□ -2.11
SRP54P61011 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SRP54P61011 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.9□□□□□ -2.11
SRP54P61011 MTCO2P3-201ENST00000442543 421 ntBASIC1.9□□□□□ -2.11
SRP54P61011 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.9□□□□□ -2.11
SRP54P61011 AC016632.1-201ENST00000503994 196 ntBASIC1.9□□□□□ -2.11
SRP54P61011 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.9□□□□□ -2.11
SRP54P61011 AL078605.1-201ENST00000603529 500 ntBASIC1.9□□□□□ -2.11
SRP54P61011 AP001836.1-201ENST00000604675 523 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms