Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.06□□□□□ -1.92
CLRN1P58418 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.06□□□□□ -1.92
CLRN1P58418 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLRN1P58418 TNPO1P3-201ENST00000436471 2662 ntBASIC3.06□□□□□ -1.92
CLRN1P58418 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.06□□□□□ -1.92
CLRN1P58418 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.06□□□□□ -1.92
CLRN1P58418 RN7SL542P-201ENST00000467147 294 ntBASIC3.06□□□□□ -1.92
CLRN1P58418 AC106707.2-201ENST00000484182 374 ntBASIC3.06□□□□□ -1.92
CLRN1P58418 RN7SKP49-201ENST00000516675 260 ntBASIC3.06□□□□□ -1.92
CLRN1P58418 RNU6-567P-201ENST00000516746 107 ntBASIC3.06□□□□□ -1.92
CLRN1P58418 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.06□□□□□ -1.92
CLRN1P58418 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.06□□□□□ -1.92
CLRN1P58418 MIR3136-201ENST00000583498 78 ntBASIC3.06□□□□□ -1.92
CLRN1P58418 AC012433.1-201ENST00000588916 398 ntBASIC3.06□□□□□ -1.92
CLRN1P58418 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.06□□□□□ -1.92
CLRN1P58418 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.06□□□□□ -1.92
CLRN1P58418 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.06□□□□□ -1.92
CLRN1P58418 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CLRN1P58418 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CLRN1P58418 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLRN1P58418 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.06□□□□□ -1.92
CLRN1P58418 GABRG2-229ENST00000641017 3628 ntBASIC3.06□□□□□ -1.92
CLRN1P58418 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
CLRN1P58418 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLRN1P58418 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.05□□□□□ -1.92
CLRN1P58418 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.05□□□□□ -1.92
CLRN1P58418 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.05□□□□□ -1.92
CLRN1P58418 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CLRN1P58418 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLRN1P58418 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLRN1P58418 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CLRN1P58418 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.05□□□□□ -1.92
CLRN1P58418 RNU6-1010P-201ENST00000362757 107 ntBASIC3.05□□□□□ -1.92
CLRN1P58418 SNORD114-19-201ENST00000363072 75 ntBASIC3.05□□□□□ -1.92
CLRN1P58418 SNORA62.3-201ENST00000365110 153 ntBASIC3.05□□□□□ -1.92
CLRN1P58418 MIR329-1-201ENST00000385028 80 ntBASIC3.05□□□□□ -1.92
CLRN1P58418 MIR549A-201ENST00000385268 96 ntBASIC3.05□□□□□ -1.92
CLRN1P58418 MT-TR-201ENST00000387439 65 ntBASIC3.05□□□□□ -1.92
CLRN1P58418 Y_RNA.602-201ENST00000410535 92 ntBASIC3.05□□□□□ -1.92
CLRN1P58418 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.05□□□□□ -1.92
CLRN1P58418 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.05□□□□□ -1.92
CLRN1P58418 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.05□□□□□ -1.92
CLRN1P58418 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.05□□□□□ -1.92
CLRN1P58418 AP001324.2-201ENST00000461163 319 ntBASIC3.05□□□□□ -1.92
CLRN1P58418 CENPBD1P1-201ENST00000464061 469 ntBASIC3.05□□□□□ -1.92
CLRN1P58418 AC025518.1-201ENST00000479856 347 ntBASIC3.05□□□□□ -1.92
CLRN1P58418 HMGB1P35-201ENST00000503360 598 ntBASIC3.05□□□□□ -1.92
CLRN1P58418 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CLRN1P58418 RNU6-1023P-201ENST00000516137 106 ntBASIC3.05□□□□□ -1.92
CLRN1P58418 Y_RNA.673-201ENST00000516306 88 ntBASIC3.05□□□□□ -1.92
CLRN1P58418 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.05□□□□□ -1.92
CLRN1P58418 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.05□□□□□ -1.92
CLRN1P58418 CYP4A27P-201ENST00000567218 190 ntBASIC3.05□□□□□ -1.92
CLRN1P58418 MIR4474-201ENST00000579189 78 ntBASIC3.05□□□□□ -1.92
CLRN1P58418 MIR1254-2-201ENST00000579553 63 ntBASIC3.05□□□□□ -1.92
CLRN1P58418 AC012493.2-201ENST00000595083 291 ntBASIC3.05□□□□□ -1.92
CLRN1P58418 AC073657.2-201ENST00000605661 303 ntBASIC3.05□□□□□ -1.92
CLRN1P58418 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.05□□□□□ -1.92
CLRN1P58418 U7.8-201ENST00000619968 63 ntBASIC3.05□□□□□ -1.92
CLRN1P58418 AC009093.8-201ENST00000641769 292 ntBASIC3.05□□□□□ -1.92
CLRN1P58418 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.05□□□□□ -1.92
CLRN1P58418 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.05□□□□□ -1.92
CLRN1P58418 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CLRN1P58418 AC007496.3-201ENST00000624987 3443 ntBASIC3.05□□□□□ -1.92
CLRN1P58418 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
CLRN1P58418 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CLRN1P58418 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLRN1P58418 AC017071.1-201ENST00000564407 2204 ntBASIC3.04□□□□□ -1.92
CLRN1P58418 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CLRN1P58418 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.04□□□□□ -1.92
CLRN1P58418 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
CLRN1P58418 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
CLRN1P58418 SNORD113-8-201ENST00000363497 74 ntBASIC3.04□□□□□ -1.92
CLRN1P58418 RNU6-873P-201ENST00000363833 107 ntBASIC3.04□□□□□ -1.92
CLRN1P58418 Y_RNA.237-201ENST00000364439 102 ntBASIC3.04□□□□□ -1.92
CLRN1P58418 SNORA20.1-201ENST00000364790 130 ntBASIC3.04□□□□□ -1.92
CLRN1P58418 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CLRN1P58418 RNU6-1145P-201ENST00000384246 107 ntBASIC3.04□□□□□ -1.92
CLRN1P58418 RPS29P4-201ENST00000414733 161 ntBASIC3.04□□□□□ -1.92
CLRN1P58418 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.04□□□□□ -1.92
CLRN1P58418 AC139712.2-201ENST00000424302 339 ntBASIC3.04□□□□□ -1.92
CLRN1P58418 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.04□□□□□ -1.92
CLRN1P58418 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.04□□□□□ -1.92
CLRN1P58418 MTND4LP30-201ENST00000454092 297 ntBASIC3.04□□□□□ -1.92
CLRN1P58418 FCF1P8-201ENST00000510322 597 ntBASIC3.04□□□□□ -1.92
CLRN1P58418 RNA5SP54-201ENST00000516951 92 ntBASIC3.04□□□□□ -1.92
CLRN1P58418 RNU6-711P-201ENST00000517255 106 ntBASIC3.04□□□□□ -1.92
CLRN1P58418 DEFB108E-201ENST00000524692 240 ntBASIC3.04□□□□□ -1.92
CLRN1P58418 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.04□□□□□ -1.92
CLRN1P58418 MIR3186-201ENST00000577404 85 ntBASIC3.04□□□□□ -1.92
CLRN1P58418 AC006130.2-201ENST00000586202 326 ntBASIC3.04□□□□□ -1.92
CLRN1P58418 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLRN1P58418 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLRN1P58418 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLRN1P58418 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.03□□□□□ -1.92
CLRN1P58418 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CLRN1P58418 ZNF204P-201ENST00000416749 2397 ntBASIC3.03□□□□□ -1.92
CLRN1P58418 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.03□□□□□ -1.92
CLRN1P58418 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CLRN1P58418 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms