Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 RNU5F-4P-201ENST00000516581 114 ntBASIC1.25□□□□□ -2.21
CLDN18P56856 RNU6-410P-201ENST00000517006 107 ntBASIC1.25□□□□□ -2.21
CLDN18P56856 RNU2-46P-201ENST00000517038 113 ntBASIC1.25□□□□□ -2.21
CLDN18P56856 RNU6-902P-201ENST00000517212 91 ntBASIC1.25□□□□□ -2.21
CLDN18P56856 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CLDN18P56856 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.25□□□□□ -2.21
CLDN18P56856 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.25□□□□□ -2.21
CLDN18P56856 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.25□□□□□ -2.21
CLDN18P56856 AC008752.3-201ENST00000588113 712 ntBASIC1.25□□□□□ -2.21
CLDN18P56856 BNIP3P16-201ENST00000589779 534 ntBASIC1.25□□□□□ -2.21
CLDN18P56856 AC083806.3-201ENST00000614016 455 ntBASIC1.25□□□□□ -2.21
CLDN18P56856 AP000560.1-201ENST00000624150 1937 ntBASIC1.25□□□□□ -2.21
CLDN18P56856 MTND4P14-201ENST00000435799 1354 ntBASIC1.24□□□□□ -2.21
CLDN18P56856 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.24□□□□□ -2.21
CLDN18P56856 RNU6-1026P-201ENST00000384465 108 ntBASIC1.24□□□□□ -2.21
CLDN18P56856 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
CLDN18P56856 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.24□□□□□ -2.21
CLDN18P56856 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.24□□□□□ -2.21
CLDN18P56856 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.24□□□□□ -2.21
CLDN18P56856 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.24□□□□□ -2.21
CLDN18P56856 HSPE1P9-201ENST00000440046 311 ntBASIC1.24□□□□□ -2.21
CLDN18P56856 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.24□□□□□ -2.21
CLDN18P56856 JTBP1-201ENST00000441314 247 ntBASIC1.24□□□□□ -2.21
CLDN18P56856 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.24□□□□□ -2.21
CLDN18P56856 TAF9P1-201ENST00000445421 515 ntBASIC1.24□□□□□ -2.21
CLDN18P56856 Z73417.1-201ENST00000447373 778 ntBASIC1.24□□□□□ -2.21
CLDN18P56856 AC245517.4-201ENST00000448601 281 ntBASIC1.24□□□□□ -2.21
CLDN18P56856 TAF9P2-201ENST00000454958 515 ntBASIC1.24□□□□□ -2.21
CLDN18P56856 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.24□□□□□ -2.21
CLDN18P56856 RNU7-14P-201ENST00000459331 62 ntBASIC1.24□□□□□ -2.21
CLDN18P56856 AL163540.1-201ENST00000485382 386 ntBASIC1.24□□□□□ -2.21
CLDN18P56856 AC079140.2-201ENST00000506193 142 ntBASIC1.24□□□□□ -2.21
CLDN18P56856 SNORA3.4-201ENST00000515969 96 ntBASIC1.24□□□□□ -2.21
CLDN18P56856 SNORA31.16-201ENST00000516773 139 ntBASIC1.24□□□□□ -2.21
CLDN18P56856 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.24□□□□□ -2.21
CLDN18P56856 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.24□□□□□ -2.21
CLDN18P56856 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.24□□□□□ -2.21
CLDN18P56856 BNIP3P8-201ENST00000597863 560 ntBASIC1.24□□□□□ -2.21
CLDN18P56856 AC022513.1-201ENST00000624512 117 ntBASIC1.24□□□□□ -2.21
CLDN18P56856 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.24□□□□□ -2.21
CLDN18P56856 AC068205.3-201ENST00000636385 468 ntBASIC1.24□□□□□ -2.21
CLDN18P56856 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.24□□□□□ -2.21
CLDN18P56856 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.23□□□□□ -2.21
CLDN18P56856 RNU6-428P-201ENST00000362942 107 ntBASIC1.23□□□□□ -2.21
CLDN18P56856 U3.9-201ENST00000363823 204 ntBASIC1.23□□□□□ -2.21
CLDN18P56856 RNU6-336P-201ENST00000364891 107 ntBASIC1.23□□□□□ -2.21
CLDN18P56856 SNORA32.2-201ENST00000384049 122 ntBASIC1.23□□□□□ -2.21
CLDN18P56856 RNU6-296P-201ENST00000384608 107 ntBASIC1.23□□□□□ -2.21
CLDN18P56856 RNU6-360P-201ENST00000390944 104 ntBASIC1.23□□□□□ -2.21
CLDN18P56856 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.23□□□□□ -2.21
CLDN18P56856 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.23□□□□□ -2.21
CLDN18P56856 AC004965.1-201ENST00000413033 213 ntBASIC1.23□□□□□ -2.21
CLDN18P56856 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.23□□□□□ -2.21
CLDN18P56856 AL593851.1-201ENST00000426171 157 ntBASIC1.23□□□□□ -2.21
CLDN18P56856 AL669831.1-202ENST00000428504 417 ntBASIC1.23□□□□□ -2.21
CLDN18P56856 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.23□□□□□ -2.21
CLDN18P56856 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.23□□□□□ -2.21
CLDN18P56856 AC079781.2-201ENST00000446424 169 ntBASIC1.23□□□□□ -2.21
CLDN18P56856 AC099513.1-201ENST00000490423 301 ntBASIC1.23□□□□□ -2.21
CLDN18P56856 AC098862.1-201ENST00000504991 413 ntBASIC1.23□□□□□ -2.21
CLDN18P56856 MTCO3P7-201ENST00000510008 774 ntBASIC1.23□□□□□ -2.21
CLDN18P56856 ATP5EP1-201ENST00000510257 156 ntBASIC1.23□□□□□ -2.21
CLDN18P56856 SCARNA1-201ENST00000517138 166 ntBASIC1.23□□□□□ -2.21
CLDN18P56856 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CLDN18P56856 AC023050.3-201ENST00000541142 333 ntBASIC1.23□□□□□ -2.21
CLDN18P56856 ZNF321P-202ENST00000550843 495 ntBASIC1.23□□□□□ -2.21
CLDN18P56856 SNORA77B-201ENST00000578179 125 ntBASIC1.23□□□□□ -2.21
CLDN18P56856 AP005136.1-201ENST00000579765 429 ntBASIC1.23□□□□□ -2.21
CLDN18P56856 MIR3937-201ENST00000580135 106 ntBASIC1.23□□□□□ -2.21
CLDN18P56856 AC012507.3-201ENST00000603556 477 ntBASIC1.23□□□□□ -2.21
CLDN18P56856 AC091805.2-201ENST00000603848 235 ntBASIC1.23□□□□□ -2.21
CLDN18P56856 AC069114.2-201ENST00000604699 304 ntBASIC1.23□□□□□ -2.21
CLDN18P56856 AL359821.1-201ENST00000605519 182 ntBASIC1.23□□□□□ -2.21
CLDN18P56856 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.23□□□□□ -2.21
CLDN18P56856 AC091304.9-201ENST00000612091 226 ntBASIC1.23□□□□□ -2.21
CLDN18P56856 AC016597.2-201ENST00000613256 341 ntBASIC1.23□□□□□ -2.21
CLDN18P56856 MIR7974-201ENST00000615835 79 ntBASIC1.23□□□□□ -2.21
CLDN18P56856 AC022960.3-201ENST00000619794 441 ntBASIC1.23□□□□□ -2.21
CLDN18P56856 AC011155.2-201ENST00000623202 216 ntBASIC1.23□□□□□ -2.21
CLDN18P56856 MTND5P9-201ENST00000503854 1755 ntBASIC1.23□□□□□ -2.21
CLDN18P56856 AL159152.1-201ENST00000635019 2587 ntBASIC1.23□□□□□ -2.21
CLDN18P56856 RNU6-1303P-201ENST00000364841 107 ntBASIC1.22□□□□□ -2.21
CLDN18P56856 SNORD1A-201ENST00000364968 72 ntBASIC1.22□□□□□ -2.21
CLDN18P56856 MTCYBP2-201ENST00000407745 171 ntBASIC1.22□□□□□ -2.21
CLDN18P56856 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.22□□□□□ -2.21
CLDN18P56856 AL031274.1-201ENST00000450334 232 ntBASIC1.22□□□□□ -2.21
CLDN18P56856 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.22□□□□□ -2.21
CLDN18P56856 SNORD11.1-201ENST00000459482 85 ntBASIC1.22□□□□□ -2.21
CLDN18P56856 RPL26P26-201ENST00000480251 434 ntBASIC1.22□□□□□ -2.21
CLDN18P56856 MTCO3P28-201ENST00000513351 515 ntBASIC1.22□□□□□ -2.21
CLDN18P56856 RNU6-1053P-201ENST00000515930 101 ntBASIC1.22□□□□□ -2.21
CLDN18P56856 AC019176.1-201ENST00000518519 225 ntBASIC1.22□□□□□ -2.21
CLDN18P56856 AC008269.2-201ENST00000561915 1105 ntBASIC1.22□□□□□ -2.21
CLDN18P56856 MIR3682-201ENST00000581338 84 ntBASIC1.22□□□□□ -2.21
CLDN18P56856 AC008250.2-201ENST00000615261 205 ntBASIC1.22□□□□□ -2.21
CLDN18P56856 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
CLDN18P56856 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CLDN18P56856 AL391987.6-201ENST00000305671 199 ntBASIC1.21□□□□□ -2.22
CLDN18P56856 SNORD33-201ENST00000362761 85 ntBASIC1.21□□□□□ -2.22
CLDN18P56856 U3.4-201ENST00000363352 213 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms