Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.09□□□□□ -2.23
COL18A1P39060 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.09□□□□□ -2.23
COL18A1P39060 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
COL18A1P39060 AC106754.1-201ENST00000562632 1513 ntBASIC1.09□□□□□ -2.24
COL18A1P39060 RNU6-1164P-201ENST00000364428 107 ntBASIC1.08□□□□□ -2.24
COL18A1P39060 MIR30A-201ENST00000385092 71 ntBASIC1.08□□□□□ -2.24
COL18A1P39060 RNA5SP501-201ENST00000410990 112 ntBASIC1.08□□□□□ -2.24
COL18A1P39060 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.08□□□□□ -2.24
COL18A1P39060 ELOCP4-201ENST00000420090 333 ntBASIC1.08□□□□□ -2.24
COL18A1P39060 NCOR1P3-201ENST00000420479 303 ntBASIC1.08□□□□□ -2.24
COL18A1P39060 MTCO3P46-201ENST00000425787 232 ntBASIC1.08□□□□□ -2.24
COL18A1P39060 RPS15AP10-201ENST00000432472 382 ntBASIC1.08□□□□□ -2.24
COL18A1P39060 RPL39P29-201ENST00000447779 157 ntBASIC1.08□□□□□ -2.24
COL18A1P39060 MTND2P39-201ENST00000457230 764 ntBASIC1.08□□□□□ -2.24
COL18A1P39060 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.08□□□□□ -2.24
COL18A1P39060 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.08□□□□□ -2.24
COL18A1P39060 SCARNA1-201ENST00000517138 166 ntBASIC1.08□□□□□ -2.24
COL18A1P39060 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.08□□□□□ -2.24
COL18A1P39060 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.08□□□□□ -2.24
COL18A1P39060 AC022878.1-201ENST00000530684 149 ntBASIC1.08□□□□□ -2.24
COL18A1P39060 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.08□□□□□ -2.24
COL18A1P39060 TRAV32-201ENST00000553993 340 ntBASIC1.08□□□□□ -2.24
COL18A1P39060 AL136363.2-201ENST00000604173 851 ntBASIC1.08□□□□□ -2.24
COL18A1P39060 MIR924-201ENST00000638017 53 ntBASIC1.08□□□□□ -2.24
COL18A1P39060 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
COL18A1P39060 AC009541.1-201ENST00000438279 2662 ntBASIC1.08□□□□□ -2.24
COL18A1P39060 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.08□□□□□ -2.24
COL18A1P39060 Y_RNA.85-201ENST00000363014 111 ntBASIC1.08□□□□□ -2.24
COL18A1P39060 RNU6-743P-201ENST00000364151 106 ntBASIC1.08□□□□□ -2.24
COL18A1P39060 RNU6-384P-201ENST00000364900 104 ntBASIC1.08□□□□□ -2.24
COL18A1P39060 SNORA24.1-201ENST00000384401 135 ntBASIC1.08□□□□□ -2.24
COL18A1P39060 CALM2P2-201ENST00000428512 440 ntBASIC1.08□□□□□ -2.24
COL18A1P39060 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.08□□□□□ -2.24
COL18A1P39060 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.08□□□□□ -2.24
COL18A1P39060 RNU1-98P-201ENST00000458992 160 ntBASIC1.08□□□□□ -2.24
COL18A1P39060 MTND3P3-201ENST00000505004 126 ntBASIC1.08□□□□□ -2.24
COL18A1P39060 RNU6-970P-201ENST00000516312 107 ntBASIC1.08□□□□□ -2.24
COL18A1P39060 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.08□□□□□ -2.24
COL18A1P39060 AP003181.2-201ENST00000528941 181 ntBASIC1.08□□□□□ -2.24
COL18A1P39060 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.08□□□□□ -2.24
COL18A1P39060 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.08□□□□□ -2.24
COL18A1P39060 AC008521.1-201ENST00000587471 187 ntBASIC1.08□□□□□ -2.24
COL18A1P39060 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.08□□□□□ -2.24
COL18A1P39060 AC063943.3-201ENST00000615562 356 ntBASIC1.08□□□□□ -2.24
COL18A1P39060 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.08□□□□□ -2.24
COL18A1P39060 OR4G3P-201ENST00000633500 913 ntBASIC1.08□□□□□ -2.24
COL18A1P39060 CBX3P1-201ENST00000325243 554 ntBASIC1.07□□□□□ -2.24
COL18A1P39060 RNU4-1-201ENST00000363925 141 ntBASIC1.07□□□□□ -2.24
COL18A1P39060 RNU6-160P-201ENST00000384591 107 ntBASIC1.07□□□□□ -2.24
COL18A1P39060 RNU6-1222P-201ENST00000384615 107 ntBASIC1.07□□□□□ -2.24
COL18A1P39060 MIR578-201ENST00000384828 96 ntBASIC1.07□□□□□ -2.24
COL18A1P39060 MIR544A-201ENST00000384855 91 ntBASIC1.07□□□□□ -2.24
COL18A1P39060 AC098592.1-201ENST00000419352 333 ntBASIC1.07□□□□□ -2.24
COL18A1P39060 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.07□□□□□ -2.24
COL18A1P39060 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.07□□□□□ -2.24
COL18A1P39060 MED13P1-201ENST00000428342 171 ntBASIC1.07□□□□□ -2.24
COL18A1P39060 HSFY7P-201ENST00000432672 318 ntBASIC1.07□□□□□ -2.24
COL18A1P39060 HSFY8P-201ENST00000437934 318 ntBASIC1.07□□□□□ -2.24
COL18A1P39060 RPS24P1-201ENST00000438550 371 ntBASIC1.07□□□□□ -2.24
COL18A1P39060 HSFY5P-201ENST00000453726 309 ntBASIC1.07□□□□□ -2.24
COL18A1P39060 AC009646.1-201ENST00000510455 318 ntBASIC1.07□□□□□ -2.24
COL18A1P39060 AC115990.1-201ENST00000526957 301 ntBASIC1.07□□□□□ -2.24
COL18A1P39060 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.07□□□□□ -2.24
COL18A1P39060 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.07□□□□□ -2.24
COL18A1P39060 TUSC7.1-201ENST00000610969 165 ntBASIC1.07□□□□□ -2.24
COL18A1P39060 AC130454.1-201ENST00000622948 401 ntBASIC1.07□□□□□ -2.24
COL18A1P39060 AL078595.3-201ENST00000623815 1166 ntBASIC1.07□□□□□ -2.24
COL18A1P39060 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
COL18A1P39060 MTND5P9-201ENST00000503854 1755 ntBASIC1.07□□□□□ -2.24
COL18A1P39060 ZNF680P1-201ENST00000436625 1469 ntBASIC1.07□□□□□ -2.24
COL18A1P39060 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
COL18A1P39060 RNU4-28P-201ENST00000364739 141 ntBASIC1.06□□□□□ -2.24
COL18A1P39060 Y_RNA.294-201ENST00000364916 102 ntBASIC1.06□□□□□ -2.24
COL18A1P39060 RNU5E-7P-201ENST00000365290 117 ntBASIC1.06□□□□□ -2.24
COL18A1P39060 RNU6-61P-201ENST00000365528 109 ntBASIC1.06□□□□□ -2.24
COL18A1P39060 RNU6-641P-201ENST00000384006 107 ntBASIC1.06□□□□□ -2.24
COL18A1P39060 MIR513B-201ENST00000385136 84 ntBASIC1.06□□□□□ -2.24
COL18A1P39060 RN7SKP200-201ENST00000410564 320 ntBASIC1.06□□□□□ -2.24
COL18A1P39060 MTND4P20-201ENST00000424125 869 ntBASIC1.06□□□□□ -2.24
COL18A1P39060 HSPE1P21-201ENST00000438283 308 ntBASIC1.06□□□□□ -2.24
COL18A1P39060 AL022238.1-201ENST00000442557 355 ntBASIC1.06□□□□□ -2.24
COL18A1P39060 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.06□□□□□ -2.24
COL18A1P39060 MTCO3P9-201ENST00000506989 781 ntBASIC1.06□□□□□ -2.24
COL18A1P39060 AC104136.1-201ENST00000512969 394 ntBASIC1.06□□□□□ -2.24
COL18A1P39060 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
COL18A1P39060 AP000654.2-201ENST00000605633 586 ntBASIC1.06□□□□□ -2.24
COL18A1P39060 AC091925.1-201ENST00000623204 462 ntBASIC1.06□□□□□ -2.24
COL18A1P39060 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
COL18A1P39060 AL589743.1-201ENST00000551932 2712 ntBASIC1.06□□□□□ -2.24
COL18A1P39060 MTCYBP36-201ENST00000404146 440 ntBASIC1.06□□□□□ -2.24
COL18A1P39060 RNU6-1245P-201ENST00000411130 106 ntBASIC1.06□□□□□ -2.24
COL18A1P39060 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.06□□□□□ -2.24
COL18A1P39060 AC007969.2-201ENST00000441891 191 ntBASIC1.06□□□□□ -2.24
COL18A1P39060 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.06□□□□□ -2.24
COL18A1P39060 AL122001.1-201ENST00000457027 370 ntBASIC1.06□□□□□ -2.24
COL18A1P39060 RNU5F-2P-201ENST00000516066 82 ntBASIC1.06□□□□□ -2.24
COL18A1P39060 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.06□□□□□ -2.24
COL18A1P39060 AC008751.2-201ENST00000597885 980 ntBASIC1.06□□□□□ -2.24
COL18A1P39060 AC078795.2-201ENST00000602835 1252 ntBASIC1.06□□□□□ -2.24
COL18A1P39060 AL157786.1-207ENST00000627771 695 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms