Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 ABCF2P2-201ENST00000450549 296 ntBASIC3.47□□□□□ -1.85
ATF4P18848 RNU6-496P-201ENST00000516145 99 ntBASIC3.47□□□□□ -1.85
ATF4P18848 AC018630.3-201ENST00000542637 96 ntBASIC3.47□□□□□ -1.85
ATF4P18848 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.47□□□□□ -1.85
ATF4P18848 MIR4697-201ENST00000582977 78 ntBASIC3.47□□□□□ -1.85
ATF4P18848 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.47□□□□□ -1.85
ATF4P18848 AC006001.4-201ENST00000622243 395 ntBASIC3.47□□□□□ -1.85
ATF4P18848 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
ATF4P18848 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ATF4P18848 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
ATF4P18848 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.47□□□□□ -1.85
ATF4P18848 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.85
ATF4P18848 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.46□□□□□ -1.85
ATF4P18848 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ATF4P18848 MIR335-201ENST00000362173 94 ntBASIC3.46□□□□□ -1.86
ATF4P18848 RNU6-944P-201ENST00000364023 107 ntBASIC3.46□□□□□ -1.86
ATF4P18848 RNU6-1264P-201ENST00000383891 107 ntBASIC3.46□□□□□ -1.86
ATF4P18848 SNORA53-201ENST00000391141 249 ntBASIC3.46□□□□□ -1.86
ATF4P18848 RNA5SP397-201ENST00000391323 118 ntBASIC3.46□□□□□ -1.86
ATF4P18848 SDHCP2-201ENST00000398565 501 ntBASIC3.46□□□□□ -1.86
ATF4P18848 RNU2-38P-201ENST00000410856 79 ntBASIC3.46□□□□□ -1.86
ATF4P18848 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.46□□□□□ -1.86
ATF4P18848 AC092017.2-201ENST00000427600 362 ntBASIC3.46□□□□□ -1.86
ATF4P18848 snoU13.1-201ENST00000459157 104 ntBASIC3.46□□□□□ -1.86
ATF4P18848 RNU7-14P-201ENST00000459331 62 ntBASIC3.46□□□□□ -1.86
ATF4P18848 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.46□□□□□ -1.86
ATF4P18848 PHBP14-201ENST00000512887 367 ntBASIC3.46□□□□□ -1.86
ATF4P18848 RNU6-1098P-201ENST00000516772 96 ntBASIC3.46□□□□□ -1.86
ATF4P18848 RN7SKP92-201ENST00000517266 244 ntBASIC3.46□□□□□ -1.86
ATF4P18848 AC023043.3-201ENST00000593113 385 ntBASIC3.46□□□□□ -1.86
ATF4P18848 AC006133.1-201ENST00000617106 264 ntBASIC3.46□□□□□ -1.86
ATF4P18848 MIR6853-201ENST00000619642 74 ntBASIC3.46□□□□□ -1.86
ATF4P18848 MIR6810-201ENST00000622701 70 ntBASIC3.46□□□□□ -1.86
ATF4P18848 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.46□□□□□ -1.86
ATF4P18848 MIR3674-201ENST00000636576 68 ntBASIC3.46□□□□□ -1.86
ATF4P18848 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ATF4P18848 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
ATF4P18848 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.46□□□□□ -1.86
ATF4P18848 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
ATF4P18848 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
ATF4P18848 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
ATF4P18848 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
ATF4P18848 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.46□□□□□ -1.86
ATF4P18848 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.46□□□□□ -1.86
ATF4P18848 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
ATF4P18848 RNA5SP191-201ENST00000362585 102 ntBASIC3.45□□□□□ -1.86
ATF4P18848 RNA5SP505-201ENST00000364748 108 ntBASIC3.45□□□□□ -1.86
ATF4P18848 RNU6-290P-201ENST00000365212 101 ntBASIC3.45□□□□□ -1.86
ATF4P18848 RNU6-234P-201ENST00000365229 104 ntBASIC3.45□□□□□ -1.86
ATF4P18848 Y_RNA.331-201ENST00000365267 102 ntBASIC3.45□□□□□ -1.86
ATF4P18848 MIR129-1-201ENST00000384972 72 ntBASIC3.45□□□□□ -1.86
ATF4P18848 RNA5SP332-201ENST00000391063 115 ntBASIC3.45□□□□□ -1.86
ATF4P18848 MIR300-201ENST00000401138 83 ntBASIC3.45□□□□□ -1.86
ATF4P18848 RNU4-30P-201ENST00000410245 143 ntBASIC3.45□□□□□ -1.86
ATF4P18848 RPL23AP1-201ENST00000428990 471 ntBASIC3.45□□□□□ -1.86
ATF4P18848 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.45□□□□□ -1.86
ATF4P18848 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.45□□□□□ -1.86
ATF4P18848 AC074290.1-201ENST00000448883 135 ntBASIC3.45□□□□□ -1.86
ATF4P18848 EEF1B2P7-201ENST00000451177 676 ntBASIC3.45□□□□□ -1.86
ATF4P18848 RN7SL385P-201ENST00000468873 276 ntBASIC3.45□□□□□ -1.86
ATF4P18848 AC107222.1-201ENST00000510899 637 ntBASIC3.45□□□□□ -1.86
ATF4P18848 RNU6-1338P-201ENST00000516328 91 ntBASIC3.45□□□□□ -1.86
ATF4P18848 DEFB108E-201ENST00000524692 240 ntBASIC3.45□□□□□ -1.86
ATF4P18848 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
ATF4P18848 RN7SL703P-201ENST00000578485 302 ntBASIC3.45□□□□□ -1.86
ATF4P18848 BPIFA4P-203ENST00000603168 689 ntBASIC3.45□□□□□ -1.86
ATF4P18848 RMST_8.1-201ENST00000610287 165 ntBASIC3.45□□□□□ -1.86
ATF4P18848 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
ATF4P18848 AC004467.1-201ENST00000615678 330 ntBASIC3.45□□□□□ -1.86
ATF4P18848 AL449363.1-201ENST00000617815 186 ntBASIC3.45□□□□□ -1.86
ATF4P18848 SDR42E1P4-201ENST00000620894 481 ntBASIC3.45□□□□□ -1.86
ATF4P18848 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.45□□□□□ -1.86
ATF4P18848 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.45□□□□□ -1.86
ATF4P18848 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
ATF4P18848 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
ATF4P18848 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
ATF4P18848 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ATF4P18848 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.45□□□□□ -1.86
ATF4P18848 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATF4P18848 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATF4P18848 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATF4P18848 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATF4P18848 AC093908.1-201ENST00000623125 8092 ntBASIC3.44□□□□□ -1.86
ATF4P18848 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATF4P18848 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATF4P18848 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
ATF4P18848 SNORD113.2-201ENST00000364166 89 ntBASIC3.44□□□□□ -1.86
ATF4P18848 RNU6-461P-201ENST00000364195 107 ntBASIC3.44□□□□□ -1.86
ATF4P18848 RNU6-1305P-201ENST00000364353 104 ntBASIC3.44□□□□□ -1.86
ATF4P18848 SNORD87-201ENST00000364849 89 ntBASIC3.44□□□□□ -1.86
ATF4P18848 RNU6-546P-201ENST00000383991 107 ntBASIC3.44□□□□□ -1.86
ATF4P18848 Y_RNA.447-201ENST00000384184 113 ntBASIC3.44□□□□□ -1.86
ATF4P18848 Y_RNA.518-201ENST00000384552 113 ntBASIC3.44□□□□□ -1.86
ATF4P18848 AL357075.1-201ENST00000404107 726 ntBASIC3.44□□□□□ -1.86
ATF4P18848 MIR548H3-201ENST00000408771 118 ntBASIC3.44□□□□□ -1.86
ATF4P18848 RN7SKP220-201ENST00000410611 288 ntBASIC3.44□□□□□ -1.86
ATF4P18848 RPL18P10-201ENST00000425606 538 ntBASIC3.44□□□□□ -1.86
ATF4P18848 TRIAP1P1-201ENST00000427062 225 ntBASIC3.44□□□□□ -1.86
ATF4P18848 AC012671.1-201ENST00000451912 203 ntBASIC3.44□□□□□ -1.86
ATF4P18848 NDUFB4P10-201ENST00000452541 359 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms