Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.41□□□□□ -1.54
CD44P16070 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CD44P16070 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
CD44P16070 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CD44P16070 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.4□□□□□ -1.54
CD44P16070 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CD44P16070 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CD44P16070 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.4□□□□□ -1.54
CD44P16070 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CD44P16070 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.4□□□□□ -1.54
CD44P16070 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CD44P16070 RNU4-32P-201ENST00000363404 141 ntBASIC5.4□□□□□ -1.54
CD44P16070 RNU6-478P-201ENST00000363904 110 ntBASIC5.4□□□□□ -1.54
CD44P16070 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CD44P16070 MIR548O-201ENST00000408583 114 ntBASIC5.4□□□□□ -1.54
CD44P16070 RNU2-59P-201ENST00000410482 191 ntBASIC5.4□□□□□ -1.54
CD44P16070 AL512326.2-201ENST00000426359 151 ntBASIC5.4□□□□□ -1.54
CD44P16070 RN7SL97P-201ENST00000486780 299 ntBASIC5.4□□□□□ -1.54
CD44P16070 RN7SL244P-201ENST00000493405 297 ntBASIC5.4□□□□□ -1.54
CD44P16070 HMGB1P22-201ENST00000505315 124 ntBASIC5.4□□□□□ -1.54
CD44P16070 AC093249.4-201ENST00000564755 259 ntBASIC5.4□□□□□ -1.54
CD44P16070 AL359075.3-201ENST00000613288 217 ntBASIC5.4□□□□□ -1.54
CD44P16070 AC091932.4-201ENST00000623386 200 ntBASIC5.4□□□□□ -1.54
CD44P16070 AP000550.3-201ENST00000637734 379 ntBASIC5.4□□□□□ -1.54
CD44P16070 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
CD44P16070 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
CD44P16070 AC005005.4-201ENST00000623789 16698 ntBASIC5.4□□□□□ -1.55
CD44P16070 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.55
CD44P16070 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CD44P16070 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CD44P16070 DHX9P1-201ENST00000436565 3076 ntBASIC5.39□□□□□ -1.55
CD44P16070 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CD44P16070 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
CD44P16070 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CD44P16070 RNU6-1313P-201ENST00000362622 102 ntBASIC5.39□□□□□ -1.55
CD44P16070 SNORA1.1-201ENST00000364671 133 ntBASIC5.39□□□□□ -1.55
CD44P16070 RNA5SP144-201ENST00000410846 116 ntBASIC5.39□□□□□ -1.55
CD44P16070 Y_RNA.621-201ENST00000411065 96 ntBASIC5.39□□□□□ -1.55
CD44P16070 AC099677.2-201ENST00000436385 175 ntBASIC5.39□□□□□ -1.55
CD44P16070 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.39□□□□□ -1.55
CD44P16070 SNORD116-26-201ENST00000516006 96 ntBASIC5.39□□□□□ -1.55
CD44P16070 RNU6-1096P-201ENST00000517089 102 ntBASIC5.39□□□□□ -1.55
CD44P16070 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.39□□□□□ -1.55
CD44P16070 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC5.39□□□□□ -1.55
CD44P16070 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.39□□□□□ -1.55
CD44P16070 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC5.39□□□□□ -1.55
CD44P16070 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
CD44P16070 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CD44P16070 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CD44P16070 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CD44P16070 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD44P16070 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CD44P16070 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.38□□□□□ -1.55
CD44P16070 AC005336.3-201ENST00000623833 2679 ntBASIC5.38□□□□□ -1.55
CD44P16070 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.38□□□□□ -1.55
CD44P16070 Y_RNA.351-201ENST00000365436 96 ntBASIC5.38□□□□□ -1.55
CD44P16070 AP000567.1-201ENST00000406413 156 ntBASIC5.38□□□□□ -1.55
CD44P16070 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.38□□□□□ -1.55
CD44P16070 AC016717.1-201ENST00000448918 286 ntBASIC5.38□□□□□ -1.55
CD44P16070 RNU7-80P-201ENST00000459562 61 ntBASIC5.38□□□□□ -1.55
CD44P16070 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.38□□□□□ -1.55
CD44P16070 RPS29P21-201ENST00000496272 170 ntBASIC5.38□□□□□ -1.55
CD44P16070 RN7SL558P-201ENST00000497468 299 ntBASIC5.38□□□□□ -1.55
CD44P16070 SNORD36C-201ENST00000516733 66 ntBASIC5.38□□□□□ -1.55
CD44P16070 RNU6-1015P-201ENST00000517121 99 ntBASIC5.38□□□□□ -1.55
CD44P16070 RNU6-709P-201ENST00000517257 104 ntBASIC5.38□□□□□ -1.55
CD44P16070 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.38□□□□□ -1.55
CD44P16070 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC5.38□□□□□ -1.55
CD44P16070 AC024220.1-201ENST00000603675 484 ntBASIC5.38□□□□□ -1.55
CD44P16070 DLEU2_5.2-201ENST00000610606 84 ntBASIC5.38□□□□□ -1.55
CD44P16070 MIR376B-201ENST00000614515 100 ntBASIC5.38□□□□□ -1.55
CD44P16070 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CD44P16070 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC5.38□□□□□ -1.55
CD44P16070 AC019206.1-201ENST00000621938 425 ntBASIC5.38□□□□□ -1.55
CD44P16070 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD44P16070 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD44P16070 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
CD44P16070 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.38□□□□□ -1.55
CD44P16070 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD44P16070 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD44P16070 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
CD44P16070 AC007496.3-201ENST00000624987 3443 ntBASIC5.38□□□□□ -1.55
CD44P16070 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CD44P16070 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CD44P16070 Y_RNA.37-201ENST00000362606 108 ntBASIC5.37□□□□□ -1.55
CD44P16070 RNU1-83P-201ENST00000363426 164 ntBASIC5.37□□□□□ -1.55
CD44P16070 RNU6-1210P-201ENST00000363775 107 ntBASIC5.37□□□□□ -1.55
CD44P16070 Y_RNA.253-201ENST00000364562 112 ntBASIC5.37□□□□□ -1.55
CD44P16070 RNU6-296P-201ENST00000384608 107 ntBASIC5.37□□□□□ -1.55
CD44P16070 MIR223-201ENST00000385204 110 ntBASIC5.37□□□□□ -1.55
CD44P16070 AC244098.2-201ENST00000422068 99 ntBASIC5.37□□□□□ -1.55
CD44P16070 RPL31P63-201ENST00000422565 375 ntBASIC5.37□□□□□ -1.55
CD44P16070 AL161651.1-201ENST00000440882 223 ntBASIC5.37□□□□□ -1.55
CD44P16070 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
CD44P16070 snoU13.4-201ENST00000458916 104 ntBASIC5.37□□□□□ -1.55
CD44P16070 snoU13.24-201ENST00000458998 104 ntBASIC5.37□□□□□ -1.55
CD44P16070 RNA5SP103-201ENST00000459503 118 ntBASIC5.37□□□□□ -1.55
CD44P16070 AC108751.2-201ENST00000469993 231 ntBASIC5.37□□□□□ -1.55
CD44P16070 RN7SL30P-201ENST00000488416 306 ntBASIC5.37□□□□□ -1.55
CD44P16070 MIR3691-201ENST00000578066 90 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms