Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
ITGA4P13612 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
ITGA4P13612 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
ITGA4P13612 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
ITGA4P13612 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
ITGA4P13612 RNU6-200P-201ENST00000364743 107 ntBASIC3.73□□□□□ -1.81
ITGA4P13612 RNU6-281P-201ENST00000384212 103 ntBASIC3.73□□□□□ -1.81
ITGA4P13612 U3.19-201ENST00000390893 196 ntBASIC3.73□□□□□ -1.81
ITGA4P13612 RNA5SP390-201ENST00000410191 113 ntBASIC3.73□□□□□ -1.81
ITGA4P13612 RNU6-1140P-201ENST00000410517 106 ntBASIC3.73□□□□□ -1.81
ITGA4P13612 RPS15AP5-201ENST00000436276 388 ntBASIC3.73□□□□□ -1.81
ITGA4P13612 AC005002.2-201ENST00000438228 269 ntBASIC3.73□□□□□ -1.81
ITGA4P13612 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.73□□□□□ -1.81
ITGA4P13612 AC010099.1-201ENST00000455434 375 ntBASIC3.73□□□□□ -1.81
ITGA4P13612 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.73□□□□□ -1.81
ITGA4P13612 SNORA74D-201ENST00000516404 141 ntBASIC3.73□□□□□ -1.81
ITGA4P13612 RN7SKP49-201ENST00000516675 260 ntBASIC3.73□□□□□ -1.81
ITGA4P13612 MIR2276-201ENST00000516886 89 ntBASIC3.73□□□□□ -1.81
ITGA4P13612 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.73□□□□□ -1.81
ITGA4P13612 AC009779.6-201ENST00000603972 165 ntBASIC3.73□□□□□ -1.81
ITGA4P13612 AL138963.2-201ENST00000605137 226 ntBASIC3.73□□□□□ -1.81
ITGA4P13612 MIR3651-201ENST00000630427 90 ntBASIC3.73□□□□□ -1.81
ITGA4P13612 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.73□□□□□ -1.81
ITGA4P13612 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.73□□□□□ -1.81
ITGA4P13612 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
ITGA4P13612 AC004944.1-201ENST00000517807 3059 ntBASIC3.73□□□□□ -1.81
ITGA4P13612 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.73□□□□□ -1.81
ITGA4P13612 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ITGA4P13612 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.72□□□□□ -1.81
ITGA4P13612 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ITGA4P13612 RNU6-1266P-201ENST00000362794 105 ntBASIC3.72□□□□□ -1.81
ITGA4P13612 RNU6-1159P-201ENST00000362933 107 ntBASIC3.72□□□□□ -1.81
ITGA4P13612 RNU6-1285P-201ENST00000363480 105 ntBASIC3.72□□□□□ -1.81
ITGA4P13612 RNU6-137P-201ENST00000363680 108 ntBASIC3.72□□□□□ -1.81
ITGA4P13612 Y_RNA.277-201ENST00000364754 102 ntBASIC3.72□□□□□ -1.81
ITGA4P13612 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ITGA4P13612 SNORD63-201ENST00000384262 68 ntBASIC3.72□□□□□ -1.81
ITGA4P13612 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
ITGA4P13612 RNU2-14P-201ENST00000411053 191 ntBASIC3.72□□□□□ -1.81
ITGA4P13612 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.72□□□□□ -1.81
ITGA4P13612 AL714022.1-201ENST00000439897 151 ntBASIC3.72□□□□□ -1.81
ITGA4P13612 HSPE1P25-201ENST00000455484 251 ntBASIC3.72□□□□□ -1.81
ITGA4P13612 AC010401.1-201ENST00000463867 348 ntBASIC3.72□□□□□ -1.81
ITGA4P13612 SNORA31.16-201ENST00000516773 139 ntBASIC3.72□□□□□ -1.81
ITGA4P13612 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.72□□□□□ -1.81
ITGA4P13612 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
ITGA4P13612 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.72□□□□□ -1.81
ITGA4P13612 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
ITGA4P13612 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
ITGA4P13612 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
ITGA4P13612 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.71□□□□□ -1.81
ITGA4P13612 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
ITGA4P13612 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
ITGA4P13612 Y_RNA.65-201ENST00000362846 100 ntBASIC3.71□□□□□ -1.82
ITGA4P13612 RNU6-525P-201ENST00000363685 104 ntBASIC3.71□□□□□ -1.82
ITGA4P13612 SNORA38.1-201ENST00000364172 131 ntBASIC3.71□□□□□ -1.82
ITGA4P13612 RNU6-290P-201ENST00000365212 101 ntBASIC3.71□□□□□ -1.82
ITGA4P13612 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
ITGA4P13612 SNORA26.3-201ENST00000391119 136 ntBASIC3.71□□□□□ -1.82
ITGA4P13612 AL358075.3-201ENST00000426289 226 ntBASIC3.71□□□□□ -1.82
ITGA4P13612 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.71□□□□□ -1.82
ITGA4P13612 AL078605.1-201ENST00000603529 500 ntBASIC3.71□□□□□ -1.82
ITGA4P13612 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.71□□□□□ -1.82
ITGA4P13612 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
ITGA4P13612 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ITGA4P13612 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.7□□□□□ -1.82
ITGA4P13612 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
ITGA4P13612 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
ITGA4P13612 AC058791.1-201ENST00000608412 3198 ntBASIC3.7□□□□□ -1.82
ITGA4P13612 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
ITGA4P13612 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ITGA4P13612 RNU4-90P-201ENST00000362773 141 ntBASIC3.7□□□□□ -1.82
ITGA4P13612 SNORD115-8-201ENST00000363856 82 ntBASIC3.7□□□□□ -1.82
ITGA4P13612 SNORD115-38-201ENST00000365037 82 ntBASIC3.7□□□□□ -1.82
ITGA4P13612 RNU6-198P-201ENST00000384258 104 ntBASIC3.7□□□□□ -1.82
ITGA4P13612 RNU4-70P-201ENST00000384579 139 ntBASIC3.7□□□□□ -1.82
ITGA4P13612 MIR329-1-201ENST00000385028 80 ntBASIC3.7□□□□□ -1.82
ITGA4P13612 RNU2-49P-201ENST00000410666 184 ntBASIC3.7□□□□□ -1.82
ITGA4P13612 AC012306.1-201ENST00000423267 114 ntBASIC3.7□□□□□ -1.82
ITGA4P13612 AC019205.3-201ENST00000424573 156 ntBASIC3.7□□□□□ -1.82
ITGA4P13612 PTGES3P4-201ENST00000426243 356 ntBASIC3.7□□□□□ -1.82
ITGA4P13612 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.7□□□□□ -1.82
ITGA4P13612 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.7□□□□□ -1.82
ITGA4P13612 CEACAMP4-201ENST00000457676 421 ntBASIC3.7□□□□□ -1.82
ITGA4P13612 RPS4XP2-201ENST00000458402 793 ntBASIC3.7□□□□□ -1.82
ITGA4P13612 RPL26P26-201ENST00000480251 434 ntBASIC3.7□□□□□ -1.82
ITGA4P13612 RNU5B-3P-201ENST00000516601 115 ntBASIC3.7□□□□□ -1.82
ITGA4P13612 RNU6-1198P-201ENST00000516904 67 ntBASIC3.7□□□□□ -1.82
ITGA4P13612 RN7SKP57-201ENST00000517248 293 ntBASIC3.7□□□□□ -1.82
ITGA4P13612 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.7□□□□□ -1.82
ITGA4P13612 AC022080.3-201ENST00000544433 482 ntBASIC3.7□□□□□ -1.82
ITGA4P13612 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.7□□□□□ -1.82
ITGA4P13612 AC130289.1-201ENST00000577321 73 ntBASIC3.7□□□□□ -1.82
ITGA4P13612 MIR4276-201ENST00000584832 70 ntBASIC3.7□□□□□ -1.82
ITGA4P13612 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.7□□□□□ -1.82
ITGA4P13612 AC091152.3-201ENST00000604227 325 ntBASIC3.7□□□□□ -1.82
ITGA4P13612 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.7□□□□□ -1.82
ITGA4P13612 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.7□□□□□ -1.82
ITGA4P13612 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.7□□□□□ -1.82
ITGA4P13612 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 742 ms