Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 RNU6-1090P-201ENST00000364065 94 ntBASIC1.91□□□□□ -2.1
TOP1P11387 RNU6-1322P-201ENST00000364309 107 ntBASIC1.91□□□□□ -2.1
TOP1P11387 Y_RNA.255-201ENST00000364581 97 ntBASIC1.91□□□□□ -2.1
TOP1P11387 RNA5SP363-201ENST00000365072 115 ntBASIC1.91□□□□□ -2.1
TOP1P11387 SNORA69-201ENST00000383895 132 ntBASIC1.91□□□□□ -2.1
TOP1P11387 RNU6-1032P-201ENST00000384100 107 ntBASIC1.91□□□□□ -2.1
TOP1P11387 RNU6-517P-201ENST00000384362 110 ntBASIC1.91□□□□□ -2.1
TOP1P11387 RNU6-166P-201ENST00000384371 107 ntBASIC1.91□□□□□ -2.1
TOP1P11387 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
TOP1P11387 RNA5SP465-201ENST00000391195 109 ntBASIC1.91□□□□□ -2.1
TOP1P11387 AL590002.1-201ENST00000406554 418 ntBASIC1.91□□□□□ -2.1
TOP1P11387 RNU6-908P-201ENST00000410160 94 ntBASIC1.91□□□□□ -2.1
TOP1P11387 RNU6-648P-201ENST00000410190 107 ntBASIC1.91□□□□□ -2.1
TOP1P11387 RNU2-29P-201ENST00000410423 189 ntBASIC1.91□□□□□ -2.1
TOP1P11387 RNU6-1025P-201ENST00000410629 104 ntBASIC1.91□□□□□ -2.1
TOP1P11387 AC138623.1-201ENST00000418060 216 ntBASIC1.91□□□□□ -2.1
TOP1P11387 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.91□□□□□ -2.1
TOP1P11387 EIF4EP2-201ENST00000422816 654 ntBASIC1.91□□□□□ -2.1
TOP1P11387 AC008267.5-201ENST00000424928 265 ntBASIC1.91□□□□□ -2.1
TOP1P11387 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.91□□□□□ -2.1
TOP1P11387 AC245102.2-201ENST00000448956 180 ntBASIC1.91□□□□□ -2.1
TOP1P11387 RNU7-180P-201ENST00000459240 63 ntBASIC1.91□□□□□ -2.1
TOP1P11387 AC087884.1-201ENST00000469738 328 ntBASIC1.91□□□□□ -2.1
TOP1P11387 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.91□□□□□ -2.1
TOP1P11387 AC112206.3-201ENST00000514578 389 ntBASIC1.91□□□□□ -2.1
TOP1P11387 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.91□□□□□ -2.1
TOP1P11387 RNA5SP503-201ENST00000517047 117 ntBASIC1.91□□□□□ -2.1
TOP1P11387 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.91□□□□□ -2.1
TOP1P11387 AC025678.1-201ENST00000567861 338 ntBASIC1.91□□□□□ -2.1
TOP1P11387 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.91□□□□□ -2.1
TOP1P11387 MIR5583-1-201ENST00000580941 59 ntBASIC1.91□□□□□ -2.1
TOP1P11387 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.91□□□□□ -2.1
TOP1P11387 MIR4713-201ENST00000582691 75 ntBASIC1.91□□□□□ -2.1
TOP1P11387 MIR4424-201ENST00000585257 86 ntBASIC1.91□□□□□ -2.1
TOP1P11387 AC073539.2-201ENST00000597113 165 ntBASIC1.91□□□□□ -2.1
TOP1P11387 AC073410.2-201ENST00000603240 332 ntBASIC1.91□□□□□ -2.1
TOP1P11387 AC008945.2-201ENST00000606056 604 ntBASIC1.91□□□□□ -2.1
TOP1P11387 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.91□□□□□ -2.1
TOP1P11387 U6.114-201ENST00000636407 96 ntBASIC1.91□□□□□ -2.1
TOP1P11387 MIR1321-201ENST00000637766 79 ntBASIC1.91□□□□□ -2.1
TOP1P11387 AC006026.1-201ENST00000444025 1803 ntBASIC1.9□□□□□ -2.11
TOP1P11387 Y_RNA.33-201ENST00000362591 102 ntBASIC1.9□□□□□ -2.11
TOP1P11387 Y_RNA.38-201ENST00000362617 102 ntBASIC1.9□□□□□ -2.11
TOP1P11387 RNU6-1287P-201ENST00000362914 107 ntBASIC1.9□□□□□ -2.11
TOP1P11387 RNU6-384P-201ENST00000364900 104 ntBASIC1.9□□□□□ -2.11
TOP1P11387 RNU6-1127P-201ENST00000384580 107 ntBASIC1.9□□□□□ -2.11
TOP1P11387 RNU6-1060P-201ENST00000384664 107 ntBASIC1.9□□□□□ -2.11
TOP1P11387 SNORA67.5-201ENST00000391036 107 ntBASIC1.9□□□□□ -2.11
TOP1P11387 RNA5SP111-201ENST00000411386 101 ntBASIC1.9□□□□□ -2.11
TOP1P11387 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.9□□□□□ -2.11
TOP1P11387 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.9□□□□□ -2.11
TOP1P11387 RNU7-63P-201ENST00000459054 62 ntBASIC1.9□□□□□ -2.11
TOP1P11387 RNU1-86P-201ENST00000516108 154 ntBASIC1.9□□□□□ -2.11
TOP1P11387 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.9□□□□□ -2.11
TOP1P11387 RNU1-107P-201ENST00000516617 154 ntBASIC1.9□□□□□ -2.11
TOP1P11387 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.9□□□□□ -2.11
TOP1P11387 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.9□□□□□ -2.11
TOP1P11387 HIF1AP1-201ENST00000553642 175 ntBASIC1.9□□□□□ -2.11
TOP1P11387 HSBP1P1-201ENST00000555205 166 ntBASIC1.9□□□□□ -2.11
TOP1P11387 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.9□□□□□ -2.11
TOP1P11387 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.9□□□□□ -2.11
TOP1P11387 AP003465.2-201ENST00000602571 373 ntBASIC1.9□□□□□ -2.11
TOP1P11387 uc_338.11-201ENST00000619132 160 ntBASIC1.9□□□□□ -2.11
TOP1P11387 MIR3529-201ENST00000637713 78 ntBASIC1.9□□□□□ -2.11
TOP1P11387 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
TOP1P11387 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
TOP1P11387 RNY4P14-201ENST00000363656 96 ntBASIC1.89□□□□□ -2.11
TOP1P11387 RNU6-457P-201ENST00000363999 107 ntBASIC1.89□□□□□ -2.11
TOP1P11387 RNU6-715P-201ENST00000365204 103 ntBASIC1.89□□□□□ -2.11
TOP1P11387 RNU6-611P-201ENST00000384276 104 ntBASIC1.89□□□□□ -2.11
TOP1P11387 Y_RNA.481-201ENST00000384373 102 ntBASIC1.89□□□□□ -2.11
TOP1P11387 SNORA16.2-201ENST00000390991 127 ntBASIC1.89□□□□□ -2.11
TOP1P11387 RNU2-3P-201ENST00000410144 191 ntBASIC1.89□□□□□ -2.11
TOP1P11387 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.89□□□□□ -2.11
TOP1P11387 SNORD56-201ENST00000413522 71 ntBASIC1.89□□□□□ -2.11
TOP1P11387 CYCSP33-201ENST00000414485 327 ntBASIC1.89□□□□□ -2.11
TOP1P11387 RPL21P90-201ENST00000415692 466 ntBASIC1.89□□□□□ -2.11
TOP1P11387 USP9YP18-201ENST00000425912 695 ntBASIC1.89□□□□□ -2.11
TOP1P11387 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.89□□□□□ -2.11
TOP1P11387 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.89□□□□□ -2.11
TOP1P11387 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.89□□□□□ -2.11
TOP1P11387 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.89□□□□□ -2.11
TOP1P11387 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.89□□□□□ -2.11
TOP1P11387 CCDC34P1-201ENST00000507441 517 ntBASIC1.89□□□□□ -2.11
TOP1P11387 MTND3P25-201ENST00000509243 135 ntBASIC1.89□□□□□ -2.11
TOP1P11387 RNA5SP401-201ENST00000515920 127 ntBASIC1.89□□□□□ -2.11
TOP1P11387 RNU2-53P-201ENST00000516257 147 ntBASIC1.89□□□□□ -2.11
TOP1P11387 MTND1P5-201ENST00000517906 940 ntBASIC1.89□□□□□ -2.11
TOP1P11387 CYCSP27-201ENST00000527643 293 ntBASIC1.89□□□□□ -2.11
TOP1P11387 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.89□□□□□ -2.11
TOP1P11387 GNAI2P1-201ENST00000541815 315 ntBASIC1.89□□□□□ -2.11
TOP1P11387 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.89□□□□□ -2.11
TOP1P11387 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.89□□□□□ -2.11
TOP1P11387 ZNF519P2-201ENST00000557032 169 ntBASIC1.89□□□□□ -2.11
TOP1P11387 AC022254.1-201ENST00000567857 235 ntBASIC1.89□□□□□ -2.11
TOP1P11387 AL138889.2-201ENST00000603883 242 ntBASIC1.89□□□□□ -2.11
TOP1P11387 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.89□□□□□ -2.11
TOP1P11387 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.89□□□□□ -2.11
TOP1P11387 U4.5-201ENST00000617137 123 ntBASIC1.89□□□□□ -2.11
TOP1P11387 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms