Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
VAPBO95292 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.07□□□□□ -2.24
VAPBO95292 BNIP3P16-201ENST00000589779 534 ntBASIC1.07□□□□□ -2.24
VAPBO95292 AC012507.3-201ENST00000603556 477 ntBASIC1.07□□□□□ -2.24
VAPBO95292 AC107304.1-201ENST00000604229 296 ntBASIC1.07□□□□□ -2.24
VAPBO95292 MIR8065-201ENST00000620577 100 ntBASIC1.07□□□□□ -2.24
VAPBO95292 U6.114-201ENST00000636407 96 ntBASIC1.07□□□□□ -2.24
VAPBO95292 RNU6-37P-201ENST00000362692 107 ntBASIC1.06□□□□□ -2.24
VAPBO95292 RNU6-11P-201ENST00000364234 107 ntBASIC1.06□□□□□ -2.24
VAPBO95292 Y_RNA.324-201ENST00000365165 102 ntBASIC1.06□□□□□ -2.24
VAPBO95292 RNU6-25P-201ENST00000383873 107 ntBASIC1.06□□□□□ -2.24
VAPBO95292 RNU6-1-201ENST00000383898 107 ntBASIC1.06□□□□□ -2.24
VAPBO95292 RNU6-48P-201ENST00000384161 107 ntBASIC1.06□□□□□ -2.24
VAPBO95292 RNU6-36P-201ENST00000384172 107 ntBASIC1.06□□□□□ -2.24
VAPBO95292 RNU6-4P-201ENST00000384205 107 ntBASIC1.06□□□□□ -2.24
VAPBO95292 RNU6-5P-201ENST00000384238 107 ntBASIC1.06□□□□□ -2.24
VAPBO95292 RNU6-3P-201ENST00000384314 107 ntBASIC1.06□□□□□ -2.24
VAPBO95292 RNU6-16P-201ENST00000384385 107 ntBASIC1.06□□□□□ -2.24
VAPBO95292 RNU6-15P-201ENST00000384534 107 ntBASIC1.06□□□□□ -2.24
VAPBO95292 RNU6-2-201ENST00000384627 107 ntBASIC1.06□□□□□ -2.24
VAPBO95292 RNU6-29P-201ENST00000384637 107 ntBASIC1.06□□□□□ -2.24
VAPBO95292 RNU6-9-201ENST00000384776 107 ntBASIC1.06□□□□□ -2.24
VAPBO95292 RNU6-33P-201ENST00000384793 107 ntBASIC1.06□□□□□ -2.24
VAPBO95292 MIR548B-201ENST00000385247 97 ntBASIC1.06□□□□□ -2.24
VAPBO95292 ARL5AP1-201ENST00000418991 388 ntBASIC1.06□□□□□ -2.24
VAPBO95292 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC1.06□□□□□ -2.24
VAPBO95292 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.06□□□□□ -2.24
VAPBO95292 MTCO3P29-201ENST00000432119 779 ntBASIC1.06□□□□□ -2.24
VAPBO95292 AC132479.1-201ENST00000449160 144 ntBASIC1.06□□□□□ -2.24
VAPBO95292 RNU7-14P-201ENST00000459331 62 ntBASIC1.06□□□□□ -2.24
VAPBO95292 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.06□□□□□ -2.24
VAPBO95292 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.06□□□□□ -2.24
VAPBO95292 Y_RNA.672-201ENST00000516289 104 ntBASIC1.06□□□□□ -2.24
VAPBO95292 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.06□□□□□ -2.24
VAPBO95292 MTCO2P2-201ENST00000591258 225 ntBASIC1.06□□□□□ -2.24
VAPBO95292 BNIP3P8-201ENST00000597863 560 ntBASIC1.06□□□□□ -2.24
VAPBO95292 SNORD114-21-201ENST00000606412 72 ntBASIC1.06□□□□□ -2.24
VAPBO95292 RNU6-6P-201ENST00000606623 107 ntBASIC1.06□□□□□ -2.24
VAPBO95292 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.06□□□□□ -2.24
VAPBO95292 AC009878.1-201ENST00000621819 340 ntBASIC1.06□□□□□ -2.24
VAPBO95292 AC138649.3-201ENST00000622154 254 ntBASIC1.06□□□□□ -2.24
VAPBO95292 AC095038.3-201ENST00000634439 195 ntBASIC1.06□□□□□ -2.24
VAPBO95292 AC006927.3-201ENST00000638789 384 ntBASIC1.06□□□□□ -2.24
VAPBO95292 Y_RNA.22-201ENST00000362492 102 ntBASIC1.05□□□□□ -2.24
VAPBO95292 RNU6-862P-201ENST00000362804 105 ntBASIC1.05□□□□□ -2.24
VAPBO95292 RNU1-96P-201ENST00000364163 162 ntBASIC1.05□□□□□ -2.24
VAPBO95292 SNORD31B-201ENST00000364977 69 ntBASIC1.05□□□□□ -2.24
VAPBO95292 SNORA20.2-201ENST00000383922 131 ntBASIC1.05□□□□□ -2.24
VAPBO95292 Y_RNA.576-201ENST00000384781 102 ntBASIC1.05□□□□□ -2.24
VAPBO95292 CYCSP33-201ENST00000414485 327 ntBASIC1.05□□□□□ -2.24
VAPBO95292 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.05□□□□□ -2.24
VAPBO95292 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.05□□□□□ -2.24
VAPBO95292 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.05□□□□□ -2.24
VAPBO95292 AL009048.1-201ENST00000450437 298 ntBASIC1.05□□□□□ -2.24
VAPBO95292 OR2AQ1P-201ENST00000451972 200 ntBASIC1.05□□□□□ -2.24
VAPBO95292 SNRPFP4-201ENST00000456366 242 ntBASIC1.05□□□□□ -2.24
VAPBO95292 OR2A41P-201ENST00000473586 105 ntBASIC1.05□□□□□ -2.24
VAPBO95292 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.05□□□□□ -2.24
VAPBO95292 MTCO3P28-201ENST00000513351 515 ntBASIC1.05□□□□□ -2.24
VAPBO95292 SNORA31.16-201ENST00000516773 139 ntBASIC1.05□□□□□ -2.24
VAPBO95292 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
VAPBO95292 HSPE1P4-201ENST00000550617 308 ntBASIC1.05□□□□□ -2.24
VAPBO95292 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.05□□□□□ -2.24
VAPBO95292 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.05□□□□□ -2.24
VAPBO95292 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.05□□□□□ -2.24
VAPBO95292 MIR4295-201ENST00000585286 85 ntBASIC1.05□□□□□ -2.24
VAPBO95292 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.05□□□□□ -2.24
VAPBO95292 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.05□□□□□ -2.24
VAPBO95292 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.05□□□□□ -2.24
VAPBO95292 AC099654.5-201ENST00000636479 350 ntBASIC1.05□□□□□ -2.24
VAPBO95292 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.05□□□□□ -2.24
VAPBO95292 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.04□□□□□ -2.24
VAPBO95292 AC092268.1-201ENST00000342691 405 ntBASIC1.04□□□□□ -2.24
VAPBO95292 RNU6-692P-201ENST00000384496 107 ntBASIC1.04□□□□□ -2.24
VAPBO95292 AL008987.1-201ENST00000415528 237 ntBASIC1.04□□□□□ -2.24
VAPBO95292 MTCO1P21-201ENST00000416634 589 ntBASIC1.04□□□□□ -2.24
VAPBO95292 SNRPEP10-201ENST00000420249 274 ntBASIC1.04□□□□□ -2.24
VAPBO95292 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
VAPBO95292 SNX2P2-201ENST00000424553 323 ntBASIC1.04□□□□□ -2.24
VAPBO95292 AC078809.1-201ENST00000427601 140 ntBASIC1.04□□□□□ -2.24
VAPBO95292 AC245047.4-201ENST00000433189 144 ntBASIC1.04□□□□□ -2.24
VAPBO95292 AC007395.1-201ENST00000451333 677 ntBASIC1.04□□□□□ -2.24
VAPBO95292 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.04□□□□□ -2.24
VAPBO95292 AC087343.1-201ENST00000477341 475 ntBASIC1.04□□□□□ -2.24
VAPBO95292 AC034244.1-201ENST00000507687 207 ntBASIC1.04□□□□□ -2.24
VAPBO95292 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.04□□□□□ -2.24
VAPBO95292 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.04□□□□□ -2.24
VAPBO95292 AC022616.3-201ENST00000523940 148 ntBASIC1.04□□□□□ -2.24
VAPBO95292 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.04□□□□□ -2.24
VAPBO95292 CYP3A52P-201ENST00000563326 91 ntBASIC1.04□□□□□ -2.24
VAPBO95292 AC015688.6-201ENST00000577737 104 ntBASIC1.04□□□□□ -2.24
VAPBO95292 MIR3976-201ENST00000606807 139 ntBASIC1.04□□□□□ -2.24
VAPBO95292 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.04□□□□□ -2.24
VAPBO95292 TUSC7.1-201ENST00000610969 165 ntBASIC1.04□□□□□ -2.24
VAPBO95292 AC138749.5-201ENST00000611461 208 ntBASIC1.04□□□□□ -2.24
VAPBO95292 AC116165.2-201ENST00000616705 206 ntBASIC1.04□□□□□ -2.24
VAPBO95292 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
VAPBO95292 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.03□□□□□ -2.24
VAPBO95292 RNA5SP327-201ENST00000362494 101 ntBASIC1.03□□□□□ -2.24
VAPBO95292 U3.4-201ENST00000363352 213 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms