Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 AC092574.1-201ENST00000609771 420 ntBASIC0.74□□□□□ -2.29
PCF11O94913 7SK.8-201ENST00000612110 250 ntBASIC0.74□□□□□ -2.29
PCF11O94913 7SK.11-201ENST00000615477 250 ntBASIC0.74□□□□□ -2.29
PCF11O94913 7SK.13-201ENST00000622040 250 ntBASIC0.74□□□□□ -2.29
PCF11O94913 RNU5B-4P-201ENST00000363508 111 ntBASIC0.73□□□□□ -2.29
PCF11O94913 Y_RNA.170-201ENST00000363746 110 ntBASIC0.73□□□□□ -2.29
PCF11O94913 RNU6-1019P-201ENST00000364424 107 ntBASIC0.73□□□□□ -2.29
PCF11O94913 Y_RNA.408-201ENST00000383987 102 ntBASIC0.73□□□□□ -2.29
PCF11O94913 AL356776.1-201ENST00000406574 447 ntBASIC0.73□□□□□ -2.29
PCF11O94913 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.73□□□□□ -2.29
PCF11O94913 Y_RNA.623-201ENST00000411128 95 ntBASIC0.73□□□□□ -2.29
PCF11O94913 TIMM9P1-201ENST00000436122 256 ntBASIC0.73□□□□□ -2.29
PCF11O94913 NDUFB1P2-201ENST00000449477 176 ntBASIC0.73□□□□□ -2.29
PCF11O94913 snoU109.2-201ENST00000459316 135 ntBASIC0.73□□□□□ -2.29
PCF11O94913 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.73□□□□□ -2.29
PCF11O94913 RNU6-322P-201ENST00000516010 103 ntBASIC0.73□□□□□ -2.29
PCF11O94913 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.73□□□□□ -2.29
PCF11O94913 AC022893.3-201ENST00000607665 437 ntBASIC0.73□□□□□ -2.29
PCF11O94913 MIR6718-201ENST00000616153 80 ntBASIC0.73□□□□□ -2.29
PCF11O94913 MIR412-201ENST00000362142 91 ntBASIC0.72□□□□□ -2.29
PCF11O94913 Y_RNA.324-201ENST00000365165 102 ntBASIC0.72□□□□□ -2.29
PCF11O94913 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
PCF11O94913 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
PCF11O94913 LARP1BP3-201ENST00000437229 869 ntBASIC0.72□□□□□ -2.29
PCF11O94913 AC091435.1-201ENST00000505442 584 ntBASIC0.72□□□□□ -2.29
PCF11O94913 RNU6-677P-201ENST00000516914 101 ntBASIC0.72□□□□□ -2.29
PCF11O94913 RNU6-334P-201ENST00000517072 102 ntBASIC0.72□□□□□ -2.29
PCF11O94913 SUMO2P18-201ENST00000518873 252 ntBASIC0.72□□□□□ -2.29
PCF11O94913 AC078795.2-201ENST00000602835 1252 ntBASIC0.72□□□□□ -2.29
PCF11O94913 AL021879.1-201ENST00000611756 288 ntBASIC0.72□□□□□ -2.29
PCF11O94913 AC104985.3-201ENST00000623479 597 ntBASIC0.72□□□□□ -2.29
PCF11O94913 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.71□□□□□ -2.3
PCF11O94913 ZNF736P7Y-201ENST00000425158 820 ntBASIC0.71□□□□□ -2.3
PCF11O94913 UBE2D3P3-201ENST00000426992 425 ntBASIC0.71□□□□□ -2.3
PCF11O94913 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
PCF11O94913 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.71□□□□□ -2.3
PCF11O94913 ACA64.5-201ENST00000516207 127 ntBASIC0.71□□□□□ -2.3
PCF11O94913 RNY4P37-201ENST00000516225 96 ntBASIC0.71□□□□□ -2.3
PCF11O94913 RNU6-758P-201ENST00000516292 89 ntBASIC0.71□□□□□ -2.3
PCF11O94913 RNU6-914P-201ENST00000516749 109 ntBASIC0.71□□□□□ -2.3
PCF11O94913 AL136520.1-202ENST00000555494 763 ntBASIC0.71□□□□□ -2.3
PCF11O94913 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.71□□□□□ -2.3
PCF11O94913 AC015688.6-201ENST00000577737 104 ntBASIC0.71□□□□□ -2.3
PCF11O94913 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
PCF11O94913 RNU6-72P-201ENST00000384285 79 ntBASIC0.7□□□□□ -2.3
PCF11O94913 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
PCF11O94913 RNU6-1176P-201ENST00000390955 107 ntBASIC0.7□□□□□ -2.3
PCF11O94913 SNORD60.2-201ENST00000516883 86 ntBASIC0.7□□□□□ -2.3
PCF11O94913 SNORA70.22-201ENST00000517160 124 ntBASIC0.7□□□□□ -2.3
PCF11O94913 AC026616.1-201ENST00000523157 525 ntBASIC0.7□□□□□ -2.3
PCF11O94913 MIR3664-201ENST00000579074 99 ntBASIC0.7□□□□□ -2.3
PCF11O94913 AL159152.1-201ENST00000635019 2587 ntBASIC0.7□□□□□ -2.3
PCF11O94913 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
PCF11O94913 RNU2-62P-201ENST00000410868 191 ntBASIC0.7□□□□□ -2.3
PCF11O94913 RNU4-22P-201ENST00000411058 166 ntBASIC0.7□□□□□ -2.3
PCF11O94913 RNU2-64P-201ENST00000411315 191 ntBASIC0.7□□□□□ -2.3
PCF11O94913 PIGFP2-201ENST00000421400 651 ntBASIC0.7□□□□□ -2.3
PCF11O94913 AC010099.3-201ENST00000423896 409 ntBASIC0.7□□□□□ -2.3
PCF11O94913 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.7□□□□□ -2.3
PCF11O94913 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.7□□□□□ -2.3
PCF11O94913 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.7□□□□□ -2.3
PCF11O94913 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.7□□□□□ -2.3
PCF11O94913 AL391001.1-201ENST00000602747 715 ntBASIC0.7□□□□□ -2.3
PCF11O94913 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.7□□□□□ -2.3
PCF11O94913 SCARNA4-202ENST00000625402 129 ntBASIC0.7□□□□□ -2.3
PCF11O94913 Y_RNA.142-201ENST00000363491 102 ntBASIC0.69□□□□□ -2.3
PCF11O94913 RNU6-438P-201ENST00000365561 103 ntBASIC0.69□□□□□ -2.3
PCF11O94913 MIR194-1-201ENST00000384892 85 ntBASIC0.69□□□□□ -2.3
PCF11O94913 RN7SKP266-201ENST00000410232 287 ntBASIC0.69□□□□□ -2.3
PCF11O94913 MTND4P3-201ENST00000417829 541 ntBASIC0.69□□□□□ -2.3
PCF11O94913 AC114737.2-201ENST00000421583 173 ntBASIC0.69□□□□□ -2.3
PCF11O94913 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.69□□□□□ -2.3
PCF11O94913 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.69□□□□□ -2.3
PCF11O94913 AL669831.1-202ENST00000428504 417 ntBASIC0.69□□□□□ -2.3
PCF11O94913 MTCO1P27-201ENST00000448269 226 ntBASIC0.69□□□□□ -2.3
PCF11O94913 AP000542.1-201ENST00000448473 371 ntBASIC0.69□□□□□ -2.3
PCF11O94913 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.69□□□□□ -2.3
PCF11O94913 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.69□□□□□ -2.3
PCF11O94913 AC104692.1-201ENST00000472406 90 ntBASIC0.69□□□□□ -2.3
PCF11O94913 RNA5SP216-201ENST00000516111 123 ntBASIC0.69□□□□□ -2.3
PCF11O94913 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.69□□□□□ -2.3
PCF11O94913 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.69□□□□□ -2.3
PCF11O94913 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.69□□□□□ -2.3
PCF11O94913 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.69□□□□□ -2.3
PCF11O94913 AL136363.2-201ENST00000604173 851 ntBASIC0.69□□□□□ -2.3
PCF11O94913 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.69□□□□□ -2.3
PCF11O94913 AC006001.4-201ENST00000622243 395 ntBASIC0.69□□□□□ -2.3
PCF11O94913 MIR409-201ENST00000362237 79 ntBASIC0.68□□□□□ -2.3
PCF11O94913 AL603865.2-201ENST00000401679 213 ntBASIC0.68□□□□□ -2.3
PCF11O94913 AC069257.2-201ENST00000441819 155 ntBASIC0.68□□□□□ -2.3
PCF11O94913 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.68□□□□□ -2.3
PCF11O94913 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.68□□□□□ -2.3
PCF11O94913 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.68□□□□□ -2.3
PCF11O94913 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.68□□□□□ -2.3
PCF11O94913 AL138889.2-201ENST00000603883 242 ntBASIC0.68□□□□□ -2.3
PCF11O94913 MIR15A-201ENST00000607334 83 ntBASIC0.68□□□□□ -2.3
PCF11O94913 RNU6-560P-201ENST00000364007 108 ntBASIC0.67□□□□□ -2.3
PCF11O94913 RNU5A-8P-201ENST00000364102 114 ntBASIC0.67□□□□□ -2.3
PCF11O94913 Y_RNA.311-201ENST00000365068 96 ntBASIC0.67□□□□□ -2.3
PCF11O94913 RPS25P9-201ENST00000435591 252 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms