Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ACTN4O43707 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
ACTN4O43707 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ACTN4O43707 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.81□□□□□ -1.64
ACTN4O43707 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.81□□□□□ -1.64
ACTN4O43707 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ACTN4O43707 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
ACTN4O43707 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.81□□□□□ -1.64
ACTN4O43707 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ACTN4O43707 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.8□□□□□ -1.64
ACTN4O43707 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
ACTN4O43707 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ACTN4O43707 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
ACTN4O43707 RNU1-75P-201ENST00000347264 129 ntBASIC4.8□□□□□ -1.64
ACTN4O43707 U3.8-201ENST00000363675 217 ntBASIC4.8□□□□□ -1.64
ACTN4O43707 MIR513A2-201ENST00000385249 127 ntBASIC4.8□□□□□ -1.64
ACTN4O43707 RNA5SP332-201ENST00000391063 115 ntBASIC4.8□□□□□ -1.64
ACTN4O43707 MIR937-201ENST00000401271 86 ntBASIC4.8□□□□□ -1.64
ACTN4O43707 MIR1278-201ENST00000408753 81 ntBASIC4.8□□□□□ -1.64
ACTN4O43707 CYCSP48-201ENST00000417124 323 ntBASIC4.8□□□□□ -1.64
ACTN4O43707 AL157831.1-201ENST00000426134 473 ntBASIC4.8□□□□□ -1.64
ACTN4O43707 AC005300.1-201ENST00000428401 373 ntBASIC4.8□□□□□ -1.64
ACTN4O43707 NDUFB4P6-201ENST00000436819 366 ntBASIC4.8□□□□□ -1.64
ACTN4O43707 RN7SL132P-201ENST00000478131 296 ntBASIC4.8□□□□□ -1.64
ACTN4O43707 SRIP1-201ENST00000489235 288 ntBASIC4.8□□□□□ -1.64
ACTN4O43707 RNU6-1073P-201ENST00000517182 106 ntBASIC4.8□□□□□ -1.64
ACTN4O43707 TRAV8-5-201ENST00000537369 341 ntBASIC4.8□□□□□ -1.64
ACTN4O43707 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
ACTN4O43707 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
ACTN4O43707 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ACTN4O43707 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
ACTN4O43707 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
ACTN4O43707 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ACTN4O43707 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.79□□□□□ -1.64
ACTN4O43707 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.79□□□□□ -1.64
ACTN4O43707 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ACTN4O43707 MAPK10-253ENST00000641010 4072 ntBASIC4.79□□□□□ -1.64
ACTN4O43707 AP002088.1-201ENST00000382740 395 ntBASIC4.79□□□□□ -1.64
ACTN4O43707 Y_RNA.432-201ENST00000384087 111 ntBASIC4.79□□□□□ -1.64
ACTN4O43707 RNU6-19P-201ENST00000384718 107 ntBASIC4.79□□□□□ -1.64
ACTN4O43707 PTMAP5-201ENST00000393073 333 ntBASIC4.79□□□□□ -1.64
ACTN4O43707 RPS16P5-201ENST00000406501 404 ntBASIC4.79□□□□□ -1.64
ACTN4O43707 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC4.79□□□□□ -1.64
ACTN4O43707 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.79□□□□□ -1.64
ACTN4O43707 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.79□□□□□ -1.64
ACTN4O43707 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.79□□□□□ -1.64
ACTN4O43707 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.79□□□□□ -1.64
ACTN4O43707 AC006445.2-201ENST00000510061 472 ntBASIC4.79□□□□□ -1.64
ACTN4O43707 IGLVIV-65-201ENST00000517313 360 ntBASIC4.79□□□□□ -1.64
ACTN4O43707 IGKV2D-19-201ENST00000523346 262 ntBASIC4.79□□□□□ -1.64
ACTN4O43707 AC021739.1-201ENST00000559631 174 ntBASIC4.79□□□□□ -1.64
ACTN4O43707 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
ACTN4O43707 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
ACTN4O43707 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
ACTN4O43707 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
ACTN4O43707 AC011266.1-201ENST00000624119 3569 ntBASIC4.79□□□□□ -1.64
ACTN4O43707 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.78□□□□□ -1.64
ACTN4O43707 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
ACTN4O43707 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ACTN4O43707 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
ACTN4O43707 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
ACTN4O43707 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.78□□□□□ -1.64
ACTN4O43707 SNORA18.2-201ENST00000383865 132 ntBASIC4.78□□□□□ -1.64
ACTN4O43707 Y_RNA.558-201ENST00000384685 113 ntBASIC4.78□□□□□ -1.64
ACTN4O43707 MIRLET7F2-201ENST00000385277 83 ntBASIC4.78□□□□□ -1.64
ACTN4O43707 RNA5SP496-201ENST00000391240 109 ntBASIC4.78□□□□□ -1.64
ACTN4O43707 RNA5SP201-201ENST00000410316 124 ntBASIC4.78□□□□□ -1.64
ACTN4O43707 RNU6-554P-201ENST00000410466 106 ntBASIC4.78□□□□□ -1.64
ACTN4O43707 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.78□□□□□ -1.64
ACTN4O43707 RN7SL98P-201ENST00000462271 300 ntBASIC4.78□□□□□ -1.64
ACTN4O43707 AC090515.1-201ENST00000465295 476 ntBASIC4.78□□□□□ -1.64
ACTN4O43707 RPS29P20-201ENST00000489592 171 ntBASIC4.78□□□□□ -1.64
ACTN4O43707 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.78□□□□□ -1.64
ACTN4O43707 AC025554.1-201ENST00000505641 188 ntBASIC4.78□□□□□ -1.64
ACTN4O43707 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.78□□□□□ -1.64
ACTN4O43707 AC006133.1-201ENST00000617106 264 ntBASIC4.78□□□□□ -1.64
ACTN4O43707 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC4.78□□□□□ -1.64
ACTN4O43707 AC140479.6-201ENST00000633535 357 ntBASIC4.78□□□□□ -1.64
ACTN4O43707 AC087190.4-201ENST00000574616 8334 ntBASIC4.78□□□□□ -1.64
ACTN4O43707 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
ACTN4O43707 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
ACTN4O43707 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ACTN4O43707 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.78□□□□□ -1.64
ACTN4O43707 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
ACTN4O43707 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ACTN4O43707 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.77□□□□□ -1.65
ACTN4O43707 MTND5P18-201ENST00000445624 1801 ntBASIC4.77□□□□□ -1.65
ACTN4O43707 Y_RNA.348-201ENST00000365403 103 ntBASIC4.77□□□□□ -1.65
ACTN4O43707 MIR93-201ENST00000385024 80 ntBASIC4.77□□□□□ -1.65
ACTN4O43707 SNORD72-201ENST00000390994 80 ntBASIC4.77□□□□□ -1.65
ACTN4O43707 RPL39P40-201ENST00000445481 146 ntBASIC4.77□□□□□ -1.65
ACTN4O43707 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.77□□□□□ -1.65
ACTN4O43707 RN7SL691P-201ENST00000494487 301 ntBASIC4.77□□□□□ -1.65
ACTN4O43707 PARP4P3-201ENST00000510265 317 ntBASIC4.77□□□□□ -1.65
ACTN4O43707 RNU2-44P-201ENST00000516795 194 ntBASIC4.77□□□□□ -1.65
ACTN4O43707 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.77□□□□□ -1.65
ACTN4O43707 BMS1P21-201ENST00000634565 365 ntBASIC4.77□□□□□ -1.65
ACTN4O43707 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
ACTN4O43707 AC068254.2-201ENST00000623938 3577 ntBASIC4.77□□□□□ -1.65
ACTN4O43707 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms