Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 MTCO3P41-201ENST00000414801 328 ntBASIC1.2□□□□□ -2.22
DFFAO00273 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.2□□□□□ -2.22
DFFAO00273 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
DFFAO00273 MTND5P25-201ENST00000430499 799 ntBASIC1.2□□□□□ -2.22
DFFAO00273 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.2□□□□□ -2.22
DFFAO00273 AC244670.1-201ENST00000436879 112 ntBASIC1.2□□□□□ -2.22
DFFAO00273 UBE2V1P8-201ENST00000437166 265 ntBASIC1.2□□□□□ -2.22
DFFAO00273 AL603825.1-201ENST00000438481 80 ntBASIC1.2□□□□□ -2.22
DFFAO00273 AC073614.1-201ENST00000438690 650 ntBASIC1.2□□□□□ -2.22
DFFAO00273 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.2□□□□□ -2.22
DFFAO00273 AC245517.4-201ENST00000448601 281 ntBASIC1.2□□□□□ -2.22
DFFAO00273 SNRPGP7-201ENST00000469016 106 ntBASIC1.2□□□□□ -2.22
DFFAO00273 AC099513.1-201ENST00000490423 301 ntBASIC1.2□□□□□ -2.22
DFFAO00273 ATP5EP1-201ENST00000510257 156 ntBASIC1.2□□□□□ -2.22
DFFAO00273 Vault.3-201ENST00000516676 95 ntBASIC1.2□□□□□ -2.22
DFFAO00273 AC023050.3-201ENST00000541142 333 ntBASIC1.2□□□□□ -2.22
DFFAO00273 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.2□□□□□ -2.22
DFFAO00273 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.2□□□□□ -2.22
DFFAO00273 TMF1P1-201ENST00000576058 373 ntBASIC1.2□□□□□ -2.22
DFFAO00273 SNORA77B-201ENST00000578179 125 ntBASIC1.2□□□□□ -2.22
DFFAO00273 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.2□□□□□ -2.22
DFFAO00273 AL590229.1-201ENST00000603497 542 ntBASIC1.2□□□□□ -2.22
DFFAO00273 AL022161.1-201ENST00000604390 213 ntBASIC1.2□□□□□ -2.22
DFFAO00273 AC090578.1-201ENST00000604955 591 ntBASIC1.2□□□□□ -2.22
DFFAO00273 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.2□□□□□ -2.22
DFFAO00273 AC004223.4-201ENST00000612426 332 ntBASIC1.2□□□□□ -2.22
DFFAO00273 AC011155.2-201ENST00000623202 216 ntBASIC1.2□□□□□ -2.22
DFFAO00273 U6.114-201ENST00000636407 96 ntBASIC1.2□□□□□ -2.22
DFFAO00273 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.2□□□□□ -2.22
DFFAO00273 RNU6-271P-201ENST00000363858 105 ntBASIC1.19□□□□□ -2.22
DFFAO00273 RNU6-1303P-201ENST00000364841 107 ntBASIC1.19□□□□□ -2.22
DFFAO00273 RNU6-336P-201ENST00000364891 107 ntBASIC1.19□□□□□ -2.22
DFFAO00273 RNU6-715P-201ENST00000365204 103 ntBASIC1.19□□□□□ -2.22
DFFAO00273 RPL21P111-201ENST00000418453 477 ntBASIC1.19□□□□□ -2.22
DFFAO00273 AL590135.1-201ENST00000422215 156 ntBASIC1.19□□□□□ -2.22
DFFAO00273 AC139712.2-201ENST00000424302 339 ntBASIC1.19□□□□□ -2.22
DFFAO00273 AC019205.3-201ENST00000424573 156 ntBASIC1.19□□□□□ -2.22
DFFAO00273 AC010975.2-201ENST00000427781 588 ntBASIC1.19□□□□□ -2.22
DFFAO00273 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.19□□□□□ -2.22
DFFAO00273 GTF2IP13-201ENST00000438487 386 ntBASIC1.19□□□□□ -2.22
DFFAO00273 AC016700.2-201ENST00000446011 156 ntBASIC1.19□□□□□ -2.22
DFFAO00273 GAPDHP17-201ENST00000449858 1001 ntBASIC1.19□□□□□ -2.22
DFFAO00273 RPS27AP8-201ENST00000452665 445 ntBASIC1.19□□□□□ -2.22
DFFAO00273 AC015911.1-201ENST00000495111 156 ntBASIC1.19□□□□□ -2.22
DFFAO00273 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.19□□□□□ -2.22
DFFAO00273 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.19□□□□□ -2.22
DFFAO00273 RNA5SP445-201ENST00000515889 115 ntBASIC1.19□□□□□ -2.22
DFFAO00273 SNORA31.16-201ENST00000516773 139 ntBASIC1.19□□□□□ -2.22
DFFAO00273 RNU6-410P-201ENST00000517006 107 ntBASIC1.19□□□□□ -2.22
DFFAO00273 AC109479.2-201ENST00000517842 174 ntBASIC1.19□□□□□ -2.22
DFFAO00273 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.19□□□□□ -2.22
DFFAO00273 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.19□□□□□ -2.22
DFFAO00273 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.19□□□□□ -2.22
DFFAO00273 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
DFFAO00273 AC245884.10-201ENST00000597355 337 ntBASIC1.19□□□□□ -2.22
DFFAO00273 AC012507.3-201ENST00000603556 477 ntBASIC1.19□□□□□ -2.22
DFFAO00273 AL050343.2-201ENST00000607338 280 ntBASIC1.19□□□□□ -2.22
DFFAO00273 AC016597.2-201ENST00000613256 341 ntBASIC1.19□□□□□ -2.22
DFFAO00273 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.19□□□□□ -2.22
DFFAO00273 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
DFFAO00273 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
DFFAO00273 RNU6-1287P-201ENST00000362914 107 ntBASIC1.18□□□□□ -2.22
DFFAO00273 RNU4-56P-201ENST00000364700 142 ntBASIC1.18□□□□□ -2.22
DFFAO00273 Y_RNA.327-201ENST00000365201 102 ntBASIC1.18□□□□□ -2.22
DFFAO00273 RNU6-1060P-201ENST00000384664 107 ntBASIC1.18□□□□□ -2.22
DFFAO00273 RNA5SP201-201ENST00000410316 124 ntBASIC1.18□□□□□ -2.22
DFFAO00273 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.18□□□□□ -2.22
DFFAO00273 SNRPEP8-201ENST00000442866 260 ntBASIC1.18□□□□□ -2.22
DFFAO00273 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.18□□□□□ -2.22
DFFAO00273 MTCYBP1-201ENST00000454315 1119 ntBASIC1.18□□□□□ -2.22
DFFAO00273 RPS26P55-201ENST00000471178 356 ntBASIC1.18□□□□□ -2.22
DFFAO00273 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.18□□□□□ -2.22
DFFAO00273 RPL26P26-201ENST00000480251 434 ntBASIC1.18□□□□□ -2.22
DFFAO00273 HMGN1P13-201ENST00000505795 138 ntBASIC1.18□□□□□ -2.22
DFFAO00273 AC108729.3-201ENST00000513484 108 ntBASIC1.18□□□□□ -2.22
DFFAO00273 SNORA3.4-201ENST00000515969 96 ntBASIC1.18□□□□□ -2.22
DFFAO00273 RNU6-1178P-201ENST00000516674 107 ntBASIC1.18□□□□□ -2.22
DFFAO00273 RNU6-902P-201ENST00000517212 91 ntBASIC1.18□□□□□ -2.22
DFFAO00273 SUMO2P18-201ENST00000518873 252 ntBASIC1.18□□□□□ -2.22
DFFAO00273 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.18□□□□□ -2.22
DFFAO00273 AC109446.1-201ENST00000566172 220 ntBASIC1.18□□□□□ -2.22
DFFAO00273 AC098848.2-201ENST00000588023 330 ntBASIC1.18□□□□□ -2.22
DFFAO00273 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.18□□□□□ -2.22
DFFAO00273 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
DFFAO00273 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.18□□□□□ -2.22
DFFAO00273 AC091812.1-201ENST00000432235 1948 ntBASIC1.18□□□□□ -2.22
DFFAO00273 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.17□□□□□ -2.22
DFFAO00273 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.17□□□□□ -2.22
DFFAO00273 MIR302D-201ENST00000362275 68 ntBASIC1.17□□□□□ -2.22
DFFAO00273 RNU6-428P-201ENST00000362942 107 ntBASIC1.17□□□□□ -2.22
DFFAO00273 U3.4-201ENST00000363352 213 ntBASIC1.17□□□□□ -2.22
DFFAO00273 Y_RNA.338-201ENST00000365320 114 ntBASIC1.17□□□□□ -2.22
DFFAO00273 SNORA32.2-201ENST00000384049 122 ntBASIC1.17□□□□□ -2.22
DFFAO00273 RN7SKP61-201ENST00000410642 295 ntBASIC1.17□□□□□ -2.22
DFFAO00273 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.17□□□□□ -2.22
DFFAO00273 RPL23AP36-201ENST00000413895 458 ntBASIC1.17□□□□□ -2.22
DFFAO00273 JTBP1-201ENST00000441314 247 ntBASIC1.17□□□□□ -2.22
DFFAO00273 AC079781.2-201ENST00000446424 169 ntBASIC1.17□□□□□ -2.22
DFFAO00273 AC013470.1-201ENST00000453438 462 ntBASIC1.17□□□□□ -2.22
DFFAO00273 AL162395.1-201ENST00000457882 422 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms