Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 Mico1.1-201ENST00000611698 204 ntBASIC4.24□□□□□ -1.73
PCDHGA11Q9Y5H2 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHGA11Q9Y5H2 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.24□□□□□ -1.73
PCDHGA11Q9Y5H2 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
PCDHGA11Q9Y5H2 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHGA11Q9Y5H2 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHGA11Q9Y5H2 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.23□□□□□ -1.73
PCDHGA11Q9Y5H2 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
PCDHGA11Q9Y5H2 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHGA11Q9Y5H2 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHGA11Q9Y5H2 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.23□□□□□ -1.73
PCDHGA11Q9Y5H2 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHGA11Q9Y5H2 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PCDHGA11Q9Y5H2 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PCDHGA11Q9Y5H2 Y_RNA.24-201ENST00000362508 103 ntBASIC4.23□□□□□ -1.73
PCDHGA11Q9Y5H2 RNU6-1205P-201ENST00000363625 106 ntBASIC4.23□□□□□ -1.73
PCDHGA11Q9Y5H2 snoU2_19.4-201ENST00000364329 80 ntBASIC4.23□□□□□ -1.73
PCDHGA11Q9Y5H2 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
PCDHGA11Q9Y5H2 MIR616-201ENST00000385293 97 ntBASIC4.23□□□□□ -1.73
PCDHGA11Q9Y5H2 MIR526A2-201ENST00000390198 65 ntBASIC4.23□□□□□ -1.73
PCDHGA11Q9Y5H2 RPS16P5-201ENST00000406501 404 ntBASIC4.23□□□□□ -1.73
PCDHGA11Q9Y5H2 RNA5SP504-201ENST00000410676 117 ntBASIC4.23□□□□□ -1.73
PCDHGA11Q9Y5H2 AL590139.1-201ENST00000416267 400 ntBASIC4.23□□□□□ -1.73
PCDHGA11Q9Y5H2 AL135790.2-201ENST00000437701 267 ntBASIC4.23□□□□□ -1.73
PCDHGA11Q9Y5H2 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.23□□□□□ -1.73
PCDHGA11Q9Y5H2 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDHGA11Q9Y5H2 IFITM8P-201ENST00000522529 394 ntBASIC4.23□□□□□ -1.73
PCDHGA11Q9Y5H2 AC109810.1-201ENST00000534066 224 ntBASIC4.23□□□□□ -1.73
PCDHGA11Q9Y5H2 AL391813.1-201ENST00000603098 260 ntBASIC4.23□□□□□ -1.73
PCDHGA11Q9Y5H2 AL391261.4-201ENST00000616012 481 ntBASIC4.23□□□□□ -1.73
PCDHGA11Q9Y5H2 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.23□□□□□ -1.73
PCDHGA11Q9Y5H2 MIR4727-201ENST00000622232 55 ntBASIC4.23□□□□□ -1.73
PCDHGA11Q9Y5H2 U6.115-201ENST00000636045 103 ntBASIC4.23□□□□□ -1.73
PCDHGA11Q9Y5H2 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.23□□□□□ -1.73
PCDHGA11Q9Y5H2 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.23□□□□□ -1.73
PCDHGA11Q9Y5H2 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
PCDHGA11Q9Y5H2 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.22□□□□□ -1.73
PCDHGA11Q9Y5H2 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
PCDHGA11Q9Y5H2 RNU4-10P-201ENST00000364383 140 ntBASIC4.22□□□□□ -1.73
PCDHGA11Q9Y5H2 RNVU1-6-201ENST00000364688 164 ntBASIC4.22□□□□□ -1.73
PCDHGA11Q9Y5H2 RNU6-818P-201ENST00000364837 108 ntBASIC4.22□□□□□ -1.73
PCDHGA11Q9Y5H2 MIR1911-201ENST00000410783 80 ntBASIC4.22□□□□□ -1.73
PCDHGA11Q9Y5H2 RNA5SP272-201ENST00000516095 111 ntBASIC4.22□□□□□ -1.73
PCDHGA11Q9Y5H2 RNU6-1007P-201ENST00000516586 107 ntBASIC4.22□□□□□ -1.73
PCDHGA11Q9Y5H2 DEFB131C-201ENST00000528817 165 ntBASIC4.22□□□□□ -1.73
PCDHGA11Q9Y5H2 MIR6730-201ENST00000622213 67 ntBASIC4.22□□□□□ -1.73
PCDHGA11Q9Y5H2 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDHGA11Q9Y5H2 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDHGA11Q9Y5H2 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHGA11Q9Y5H2 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.22□□□□□ -1.73
PCDHGA11Q9Y5H2 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.22□□□□□ -1.73
PCDHGA11Q9Y5H2 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDHGA11Q9Y5H2 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PCDHGA11Q9Y5H2 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHGA11Q9Y5H2 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
PCDHGA11Q9Y5H2 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
PCDHGA11Q9Y5H2 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
PCDHGA11Q9Y5H2 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
PCDHGA11Q9Y5H2 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.73
PCDHGA11Q9Y5H2 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDHGA11Q9Y5H2 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PCDHGA11Q9Y5H2 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PCDHGA11Q9Y5H2 RNU6-1048P-201ENST00000364054 107 ntBASIC4.21□□□□□ -1.74
PCDHGA11Q9Y5H2 MIR539-201ENST00000365690 78 ntBASIC4.21□□□□□ -1.74
PCDHGA11Q9Y5H2 RNU6-144P-201ENST00000383951 107 ntBASIC4.21□□□□□ -1.74
PCDHGA11Q9Y5H2 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
PCDHGA11Q9Y5H2 HMGN2P20-201ENST00000437531 273 ntBASIC4.21□□□□□ -1.74
PCDHGA11Q9Y5H2 AC112771.1-201ENST00000463581 102 ntBASIC4.21□□□□□ -1.74
PCDHGA11Q9Y5H2 SNORA25.12-201ENST00000516202 82 ntBASIC4.21□□□□□ -1.74
PCDHGA11Q9Y5H2 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHGA11Q9Y5H2 AL359881.1-201ENST00000602916 267 ntBASIC4.21□□□□□ -1.74
PCDHGA11Q9Y5H2 AL391903.3-201ENST00000612158 163 ntBASIC4.21□□□□□ -1.74
PCDHGA11Q9Y5H2 uc_338.14-201ENST00000613162 166 ntBASIC4.21□□□□□ -1.74
PCDHGA11Q9Y5H2 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHGA11Q9Y5H2 AC091953.5-201ENST00000622919 233 ntBASIC4.21□□□□□ -1.74
PCDHGA11Q9Y5H2 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHGA11Q9Y5H2 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDHGA11Q9Y5H2 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGA11Q9Y5H2 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA11Q9Y5H2 AC006504.1-201ENST00000562493 3666 ntBASIC4.2□□□□□ -1.74
PCDHGA11Q9Y5H2 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA11Q9Y5H2 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA11Q9Y5H2 RNA5SP205-201ENST00000364653 136 ntBASIC4.2□□□□□ -1.74
PCDHGA11Q9Y5H2 Y_RNA.310-201ENST00000365063 113 ntBASIC4.2□□□□□ -1.74
PCDHGA11Q9Y5H2 RNU6-969P-201ENST00000383900 105 ntBASIC4.2□□□□□ -1.74
PCDHGA11Q9Y5H2 SNORA67.2-201ENST00000384300 149 ntBASIC4.2□□□□□ -1.74
PCDHGA11Q9Y5H2 MIR129-1-201ENST00000384972 72 ntBASIC4.2□□□□□ -1.74
PCDHGA11Q9Y5H2 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHGA11Q9Y5H2 AL121914.1-201ENST00000450188 156 ntBASIC4.2□□□□□ -1.74
PCDHGA11Q9Y5H2 ABCF2P2-201ENST00000450549 296 ntBASIC4.2□□□□□ -1.74
PCDHGA11Q9Y5H2 AL137159.1-201ENST00000452808 512 ntBASIC4.2□□□□□ -1.74
PCDHGA11Q9Y5H2 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDHGA11Q9Y5H2 RPL21P126-201ENST00000470049 478 ntBASIC4.2□□□□□ -1.74
PCDHGA11Q9Y5H2 RPL36AP48-201ENST00000485521 314 ntBASIC4.2□□□□□ -1.74
PCDHGA11Q9Y5H2 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDHGA11Q9Y5H2 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHGA11Q9Y5H2 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGA11Q9Y5H2 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
PCDHGA11Q9Y5H2 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGA11Q9Y5H2 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms