Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHB11Q9Y5F2 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHB11Q9Y5F2 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHB11Q9Y5F2 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
PCDHB11Q9Y5F2 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHB11Q9Y5F2 SNORD114-19-201ENST00000363072 75 ntBASIC4.34□□□□□ -1.71
PCDHB11Q9Y5F2 U3.8-201ENST00000363675 217 ntBASIC4.34□□□□□ -1.71
PCDHB11Q9Y5F2 RNA5SP151-201ENST00000365632 117 ntBASIC4.34□□□□□ -1.71
PCDHB11Q9Y5F2 SNORA67.2-201ENST00000384300 149 ntBASIC4.34□□□□□ -1.71
PCDHB11Q9Y5F2 MIR23B-201ENST00000384832 97 ntBASIC4.34□□□□□ -1.71
PCDHB11Q9Y5F2 SNORA48.5-201ENST00000391143 135 ntBASIC4.34□□□□□ -1.71
PCDHB11Q9Y5F2 RN7SKP177-201ENST00000410567 355 ntBASIC4.34□□□□□ -1.71
PCDHB11Q9Y5F2 AC245291.1-201ENST00000419501 328 ntBASIC4.34□□□□□ -1.71
PCDHB11Q9Y5F2 HMGN2P20-201ENST00000437531 273 ntBASIC4.34□□□□□ -1.71
PCDHB11Q9Y5F2 PHBP16-201ENST00000446318 950 ntBASIC4.34□□□□□ -1.71
PCDHB11Q9Y5F2 AL441985.1-201ENST00000457727 251 ntBASIC4.34□□□□□ -1.71
PCDHB11Q9Y5F2 AC145146.1-201ENST00000496370 254 ntBASIC4.34□□□□□ -1.71
PCDHB11Q9Y5F2 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHB11Q9Y5F2 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.34□□□□□ -1.71
PCDHB11Q9Y5F2 RNA5SP497-201ENST00000516081 97 ntBASIC4.34□□□□□ -1.71
PCDHB11Q9Y5F2 TRAV8-5-201ENST00000537369 341 ntBASIC4.34□□□□□ -1.71
PCDHB11Q9Y5F2 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHB11Q9Y5F2 AL137843.1-201ENST00000605078 385 ntBASIC4.34□□□□□ -1.71
PCDHB11Q9Y5F2 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHB11Q9Y5F2 AC110774.1-201ENST00000623567 2018 ntBASIC4.34□□□□□ -1.71
PCDHB11Q9Y5F2 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.34□□□□□ -1.72
PCDHB11Q9Y5F2 AL592182.3-201ENST00000642132 3304 ntBASIC4.34□□□□□ -1.72
PCDHB11Q9Y5F2 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PCDHB11Q9Y5F2 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.33□□□□□ -1.72
PCDHB11Q9Y5F2 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDHB11Q9Y5F2 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.33□□□□□ -1.72
PCDHB11Q9Y5F2 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHB11Q9Y5F2 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDHB11Q9Y5F2 Y_RNA.229-201ENST00000364347 113 ntBASIC4.33□□□□□ -1.72
PCDHB11Q9Y5F2 RNU6-1228P-201ENST00000391014 107 ntBASIC4.33□□□□□ -1.72
PCDHB11Q9Y5F2 RNU2-52P-201ENST00000410680 190 ntBASIC4.33□□□□□ -1.72
PCDHB11Q9Y5F2 RNA5SP146-201ENST00000410743 123 ntBASIC4.33□□□□□ -1.72
PCDHB11Q9Y5F2 AC010154.1-201ENST00000425857 269 ntBASIC4.33□□□□□ -1.72
PCDHB11Q9Y5F2 TBCAP1-201ENST00000436520 327 ntBASIC4.33□□□□□ -1.72
PCDHB11Q9Y5F2 AL714022.1-201ENST00000439897 151 ntBASIC4.33□□□□□ -1.72
PCDHB11Q9Y5F2 AL645939.1-201ENST00000453429 797 ntBASIC4.33□□□□□ -1.72
PCDHB11Q9Y5F2 RPS3P1-201ENST00000456781 192 ntBASIC4.33□□□□□ -1.72
PCDHB11Q9Y5F2 snoU13.28-201ENST00000459235 104 ntBASIC4.33□□□□□ -1.72
PCDHB11Q9Y5F2 AC092991.1-201ENST00000477176 376 ntBASIC4.33□□□□□ -1.72
PCDHB11Q9Y5F2 AC105137.1-201ENST00000484355 562 ntBASIC4.33□□□□□ -1.72
PCDHB11Q9Y5F2 SNORA70.12-201ENST00000516084 153 ntBASIC4.33□□□□□ -1.72
PCDHB11Q9Y5F2 RNU2-44P-201ENST00000516795 194 ntBASIC4.33□□□□□ -1.72
PCDHB11Q9Y5F2 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.33□□□□□ -1.72
PCDHB11Q9Y5F2 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHB11Q9Y5F2 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDHB11Q9Y5F2 AC099778.2-201ENST00000610904 211 ntBASIC4.33□□□□□ -1.72
PCDHB11Q9Y5F2 AC011603.4-201ENST00000611325 277 ntBASIC4.33□□□□□ -1.72
PCDHB11Q9Y5F2 AC034229.5-201ENST00000624258 185 ntBASIC4.33□□□□□ -1.72
PCDHB11Q9Y5F2 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDHB11Q9Y5F2 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHB11Q9Y5F2 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
PCDHB11Q9Y5F2 RNU1-63P-201ENST00000383902 164 ntBASIC4.32□□□□□ -1.72
PCDHB11Q9Y5F2 Y_RNA.563-201ENST00000384707 108 ntBASIC4.32□□□□□ -1.72
PCDHB11Q9Y5F2 MIR23A-201ENST00000385245 73 ntBASIC4.32□□□□□ -1.72
PCDHB11Q9Y5F2 MT-TT-201ENST00000387460 66 ntBASIC4.32□□□□□ -1.72
PCDHB11Q9Y5F2 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHB11Q9Y5F2 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHB11Q9Y5F2 RPL21P129-201ENST00000491732 478 ntBASIC4.32□□□□□ -1.72
PCDHB11Q9Y5F2 AC006499.6-201ENST00000511169 607 ntBASIC4.32□□□□□ -1.72
PCDHB11Q9Y5F2 RNU1-61P-201ENST00000516107 151 ntBASIC4.32□□□□□ -1.72
PCDHB11Q9Y5F2 RNU6-659P-201ENST00000516454 104 ntBASIC4.32□□□□□ -1.72
PCDHB11Q9Y5F2 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PCDHB11Q9Y5F2 FAM27D1-201ENST00000612308 341 ntBASIC4.32□□□□□ -1.72
PCDHB11Q9Y5F2 AL445567.2-201ENST00000618935 498 ntBASIC4.32□□□□□ -1.72
PCDHB11Q9Y5F2 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PCDHB11Q9Y5F2 AP001340.1-201ENST00000624405 217 ntBASIC4.32□□□□□ -1.72
PCDHB11Q9Y5F2 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHB11Q9Y5F2 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHB11Q9Y5F2 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHB11Q9Y5F2 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHB11Q9Y5F2 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHB11Q9Y5F2 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PCDHB11Q9Y5F2 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHB11Q9Y5F2 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHB11Q9Y5F2 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.31□□□□□ -1.72
PCDHB11Q9Y5F2 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHB11Q9Y5F2 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHB11Q9Y5F2 RNA5SP28-201ENST00000363841 119 ntBASIC4.31□□□□□ -1.72
PCDHB11Q9Y5F2 RNU6-144P-201ENST00000383951 107 ntBASIC4.31□□□□□ -1.72
PCDHB11Q9Y5F2 RNU6-1056P-201ENST00000383996 107 ntBASIC4.31□□□□□ -1.72
PCDHB11Q9Y5F2 RNU6-460P-201ENST00000391158 108 ntBASIC4.31□□□□□ -1.72
PCDHB11Q9Y5F2 AL606845.1-201ENST00000404881 255 ntBASIC4.31□□□□□ -1.72
PCDHB11Q9Y5F2 RNU6-628P-201ENST00000410675 107 ntBASIC4.31□□□□□ -1.72
PCDHB11Q9Y5F2 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PCDHB11Q9Y5F2 RN7SL98P-201ENST00000462271 300 ntBASIC4.31□□□□□ -1.72
PCDHB11Q9Y5F2 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC4.31□□□□□ -1.72
PCDHB11Q9Y5F2 AC100770.1-201ENST00000532310 322 ntBASIC4.31□□□□□ -1.72
PCDHB11Q9Y5F2 MIR4724-201ENST00000579485 89 ntBASIC4.31□□□□□ -1.72
PCDHB11Q9Y5F2 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHB11Q9Y5F2 AC025754.2-201ENST00000606491 432 ntBASIC4.31□□□□□ -1.72
PCDHB11Q9Y5F2 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHB11Q9Y5F2 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHB11Q9Y5F2 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHB11Q9Y5F2 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.3□□□□□ -1.72
PCDHB11Q9Y5F2 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms