Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ATXN3LQ9H3M9 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.96□□□□□ -1.78
ATXN3LQ9H3M9 AL109809.4-201ENST00000603520 2185 ntBASIC3.96□□□□□ -1.78
ATXN3LQ9H3M9 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.96□□□□□ -1.78
ATXN3LQ9H3M9 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ATXN3LQ9H3M9 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
ATXN3LQ9H3M9 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.95□□□□□ -1.78
ATXN3LQ9H3M9 AC092268.1-201ENST00000342691 405 ntBASIC3.95□□□□□ -1.78
ATXN3LQ9H3M9 Y_RNA.101-201ENST00000363154 102 ntBASIC3.95□□□□□ -1.78
ATXN3LQ9H3M9 SNORD116-18-201ENST00000383961 92 ntBASIC3.95□□□□□ -1.78
ATXN3LQ9H3M9 MIR3074-201ENST00000384885 81 ntBASIC3.95□□□□□ -1.78
ATXN3LQ9H3M9 MIR607-201ENST00000385241 96 ntBASIC3.95□□□□□ -1.78
ATXN3LQ9H3M9 AL357139.1-201ENST00000407792 426 ntBASIC3.95□□□□□ -1.78
ATXN3LQ9H3M9 AC078809.1-201ENST00000427601 140 ntBASIC3.95□□□□□ -1.78
ATXN3LQ9H3M9 VDAC1P3-201ENST00000434069 851 ntBASIC3.95□□□□□ -1.78
ATXN3LQ9H3M9 PRSS3P4-201ENST00000453323 162 ntBASIC3.95□□□□□ -1.78
ATXN3LQ9H3M9 AL645939.1-201ENST00000453429 797 ntBASIC3.95□□□□□ -1.78
ATXN3LQ9H3M9 RPL30P12-201ENST00000474666 353 ntBASIC3.95□□□□□ -1.78
ATXN3LQ9H3M9 AC106707.2-201ENST00000484182 374 ntBASIC3.95□□□□□ -1.78
ATXN3LQ9H3M9 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.95□□□□□ -1.78
ATXN3LQ9H3M9 RNU6-191P-201ENST00000516295 94 ntBASIC3.95□□□□□ -1.78
ATXN3LQ9H3M9 AC018448.1-201ENST00000552843 316 ntBASIC3.95□□□□□ -1.78
ATXN3LQ9H3M9 AC233702.2-202ENST00000562547 291 ntBASIC3.95□□□□□ -1.78
ATXN3LQ9H3M9 AC009163.5-201ENST00000575421 637 ntBASIC3.95□□□□□ -1.78
ATXN3LQ9H3M9 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ATXN3LQ9H3M9 AC110491.1-201ENST00000562191 2010 ntBASIC3.95□□□□□ -1.78
ATXN3LQ9H3M9 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ATXN3LQ9H3M9 MTND5P35-201ENST00000557537 1720 ntBASIC3.95□□□□□ -1.78
ATXN3LQ9H3M9 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.95□□□□□ -1.78
ATXN3LQ9H3M9 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.95□□□□□ -1.78
ATXN3LQ9H3M9 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ATXN3LQ9H3M9 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ATXN3LQ9H3M9 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATXN3LQ9H3M9 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
ATXN3LQ9H3M9 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ATXN3LQ9H3M9 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.94□□□□□ -1.78
ATXN3LQ9H3M9 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ATXN3LQ9H3M9 RNU6-653P-201ENST00000363074 106 ntBASIC3.94□□□□□ -1.78
ATXN3LQ9H3M9 RNA5SP51-201ENST00000364750 119 ntBASIC3.94□□□□□ -1.78
ATXN3LQ9H3M9 Y_RNA.441-201ENST00000384123 112 ntBASIC3.94□□□□□ -1.78
ATXN3LQ9H3M9 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
ATXN3LQ9H3M9 RNA5SP39-201ENST00000411245 120 ntBASIC3.94□□□□□ -1.78
ATXN3LQ9H3M9 NDUFS5P4-201ENST00000412983 318 ntBASIC3.94□□□□□ -1.78
ATXN3LQ9H3M9 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.94□□□□□ -1.78
ATXN3LQ9H3M9 AC012306.1-201ENST00000423267 114 ntBASIC3.94□□□□□ -1.78
ATXN3LQ9H3M9 RPS15AP5-201ENST00000436276 388 ntBASIC3.94□□□□□ -1.78
ATXN3LQ9H3M9 RPL39P29-201ENST00000447779 157 ntBASIC3.94□□□□□ -1.78
ATXN3LQ9H3M9 RNU6-928P-201ENST00000516876 104 ntBASIC3.94□□□□□ -1.78
ATXN3LQ9H3M9 RNA5SP54-201ENST00000516951 92 ntBASIC3.94□□□□□ -1.78
ATXN3LQ9H3M9 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.94□□□□□ -1.78
ATXN3LQ9H3M9 U3.45-201ENST00000607547 219 ntBASIC3.94□□□□□ -1.78
ATXN3LQ9H3M9 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.94□□□□□ -1.78
ATXN3LQ9H3M9 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.94□□□□□ -1.78
ATXN3LQ9H3M9 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
ATXN3LQ9H3M9 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
ATXN3LQ9H3M9 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.94□□□□□ -1.78
ATXN3LQ9H3M9 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.94□□□□□ -1.78
ATXN3LQ9H3M9 UBE3AP2-201ENST00000429033 2259 ntBASIC3.93□□□□□ -1.78
ATXN3LQ9H3M9 AC092593.1-201ENST00000515413 1815 ntBASIC3.93□□□□□ -1.78
ATXN3LQ9H3M9 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ATXN3LQ9H3M9 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ATXN3LQ9H3M9 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.93□□□□□ -1.78
ATXN3LQ9H3M9 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
ATXN3LQ9H3M9 Y_RNA.272-201ENST00000364696 102 ntBASIC3.93□□□□□ -1.78
ATXN3LQ9H3M9 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.93□□□□□ -1.78
ATXN3LQ9H3M9 BMS1P22-201ENST00000414726 313 ntBASIC3.93□□□□□ -1.78
ATXN3LQ9H3M9 RAB28P5-201ENST00000427490 651 ntBASIC3.93□□□□□ -1.78
ATXN3LQ9H3M9 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.93□□□□□ -1.78
ATXN3LQ9H3M9 AC012308.1-201ENST00000451232 178 ntBASIC3.93□□□□□ -1.78
ATXN3LQ9H3M9 RPS26P15-201ENST00000488067 348 ntBASIC3.93□□□□□ -1.78
ATXN3LQ9H3M9 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.93□□□□□ -1.78
ATXN3LQ9H3M9 SNORA31.16-201ENST00000516773 139 ntBASIC3.93□□□□□ -1.78
ATXN3LQ9H3M9 CKS1BP7-201ENST00000522230 235 ntBASIC3.93□□□□□ -1.78
ATXN3LQ9H3M9 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.93□□□□□ -1.78
ATXN3LQ9H3M9 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.93□□□□□ -1.78
ATXN3LQ9H3M9 AC091932.3-201ENST00000624223 323 ntBASIC3.93□□□□□ -1.78
ATXN3LQ9H3M9 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ATXN3LQ9H3M9 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.93□□□□□ -1.78
ATXN3LQ9H3M9 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ATXN3LQ9H3M9 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.93□□□□□ -1.78
ATXN3LQ9H3M9 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.93□□□□□ -1.78
ATXN3LQ9H3M9 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.93□□□□□ -1.78
ATXN3LQ9H3M9 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
ATXN3LQ9H3M9 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.93□□□□□ -1.78
ATXN3LQ9H3M9 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ATXN3LQ9H3M9 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.93□□□□□ -1.78
ATXN3LQ9H3M9 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
ATXN3LQ9H3M9 IPO8P1-201ENST00000455509 3109 ntBASIC3.92□□□□□ -1.78
ATXN3LQ9H3M9 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
ATXN3LQ9H3M9 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ATXN3LQ9H3M9 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.92□□□□□ -1.78
ATXN3LQ9H3M9 AC022336.2-201ENST00000568966 2538 ntBASIC3.92□□□□□ -1.78
ATXN3LQ9H3M9 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
ATXN3LQ9H3M9 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ATXN3LQ9H3M9 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.92□□□□□ -1.78
ATXN3LQ9H3M9 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.92□□□□□ -1.78
ATXN3LQ9H3M9 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.92□□□□□ -1.78
ATXN3LQ9H3M9 Y_RNA.179-201ENST00000363844 90 ntBASIC3.92□□□□□ -1.78
ATXN3LQ9H3M9 Y_RNA.498-201ENST00000384460 102 ntBASIC3.92□□□□□ -1.78
ATXN3LQ9H3M9 RN7SKP177-201ENST00000410567 355 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms