Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
NBPF3Q9H094 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
NBPF3Q9H094 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.22□□□□□ -1.57
NBPF3Q9H094 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NBPF3Q9H094 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.22□□□□□ -1.57
NBPF3Q9H094 Y_RNA.243-201ENST00000364481 109 ntBASIC5.22□□□□□ -1.57
NBPF3Q9H094 RNU6-1152P-201ENST00000384576 107 ntBASIC5.22□□□□□ -1.57
NBPF3Q9H094 MIR3065-201ENST00000390137 79 ntBASIC5.22□□□□□ -1.57
NBPF3Q9H094 SNORA11.1-201ENST00000408133 129 ntBASIC5.22□□□□□ -1.57
NBPF3Q9H094 MIR1302-5-201ENST00000408164 150 ntBASIC5.22□□□□□ -1.57
NBPF3Q9H094 RN7SKP202-201ENST00000410439 330 ntBASIC5.22□□□□□ -1.57
NBPF3Q9H094 RNU6-628P-201ENST00000410675 107 ntBASIC5.22□□□□□ -1.57
NBPF3Q9H094 AL135786.1-201ENST00000415892 214 ntBASIC5.22□□□□□ -1.57
NBPF3Q9H094 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC5.22□□□□□ -1.57
NBPF3Q9H094 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC5.22□□□□□ -1.57
NBPF3Q9H094 RN7SL98P-201ENST00000462271 300 ntBASIC5.22□□□□□ -1.57
NBPF3Q9H094 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC5.22□□□□□ -1.57
NBPF3Q9H094 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
NBPF3Q9H094 AC136601.2-201ENST00000604356 474 ntBASIC5.22□□□□□ -1.57
NBPF3Q9H094 AL591034.3-201ENST00000605511 685 ntBASIC5.22□□□□□ -1.57
NBPF3Q9H094 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
NBPF3Q9H094 AC007546.2-201ENST00000623996 360 ntBASIC5.22□□□□□ -1.57
NBPF3Q9H094 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NBPF3Q9H094 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
NBPF3Q9H094 MARK2P15-201ENST00000432204 2186 ntBASIC5.22□□□□□ -1.57
NBPF3Q9H094 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NBPF3Q9H094 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.22□□□□□ -1.57
NBPF3Q9H094 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.21□□□□□ -1.58
NBPF3Q9H094 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NBPF3Q9H094 RNA5SP307-201ENST00000362863 116 ntBASIC5.21□□□□□ -1.58
NBPF3Q9H094 SNORD87-201ENST00000364849 89 ntBASIC5.21□□□□□ -1.58
NBPF3Q9H094 RNU6-820P-201ENST00000384273 107 ntBASIC5.21□□□□□ -1.58
NBPF3Q9H094 MIR450A2-201ENST00000385022 100 ntBASIC5.21□□□□□ -1.58
NBPF3Q9H094 MIR195-201ENST00000385194 87 ntBASIC5.21□□□□□ -1.58
NBPF3Q9H094 AL358232.1-201ENST00000448030 501 ntBASIC5.21□□□□□ -1.58
NBPF3Q9H094 RNU6ATAC17P-201ENST00000516074 71 ntBASIC5.21□□□□□ -1.58
NBPF3Q9H094 RNU6-197P-201ENST00000516680 100 ntBASIC5.21□□□□□ -1.58
NBPF3Q9H094 RNU6-703P-201ENST00000516946 107 ntBASIC5.21□□□□□ -1.58
NBPF3Q9H094 AL356575.1-201ENST00000603008 283 ntBASIC5.21□□□□□ -1.58
NBPF3Q9H094 AC134878.1-201ENST00000619901 243 ntBASIC5.21□□□□□ -1.58
NBPF3Q9H094 MIR3653-201ENST00000625572 110 ntBASIC5.21□□□□□ -1.58
NBPF3Q9H094 MIR3529-201ENST00000637713 78 ntBASIC5.21□□□□□ -1.58
NBPF3Q9H094 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.21□□□□□ -1.58
NBPF3Q9H094 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NBPF3Q9H094 AC073073.2-201ENST00000609827 2578 ntBASIC5.21□□□□□ -1.58
NBPF3Q9H094 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC5.21□□□□□ -1.58
NBPF3Q9H094 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
NBPF3Q9H094 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NBPF3Q9H094 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
NBPF3Q9H094 MFSD8-242ENST00000641690 4199 ntBASIC5.2□□□□□ -1.58
NBPF3Q9H094 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
NBPF3Q9H094 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.2□□□□□ -1.58
NBPF3Q9H094 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
NBPF3Q9H094 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NBPF3Q9H094 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
NBPF3Q9H094 MIR494-201ENST00000349529 81 ntBASIC5.2□□□□□ -1.58
NBPF3Q9H094 RNA5SP125-201ENST00000364843 120 ntBASIC5.2□□□□□ -1.58
NBPF3Q9H094 Y_RNA.549-201ENST00000384657 102 ntBASIC5.2□□□□□ -1.58
NBPF3Q9H094 RNU6-813P-201ENST00000384691 107 ntBASIC5.2□□□□□ -1.58
NBPF3Q9H094 MIR554-201ENST00000384874 96 ntBASIC5.2□□□□□ -1.58
NBPF3Q9H094 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC5.2□□□□□ -1.58
NBPF3Q9H094 AC019205.3-201ENST00000424573 156 ntBASIC5.2□□□□□ -1.58
NBPF3Q9H094 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.2□□□□□ -1.58
NBPF3Q9H094 AC103975.1-201ENST00000482506 483 ntBASIC5.2□□□□□ -1.58
NBPF3Q9H094 AC117454.1-201ENST00000491120 168 ntBASIC5.2□□□□□ -1.58
NBPF3Q9H094 PARP4P3-201ENST00000510265 317 ntBASIC5.2□□□□□ -1.58
NBPF3Q9H094 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NBPF3Q9H094 AC007012.1-201ENST00000567192 175 ntBASIC5.2□□□□□ -1.58
NBPF3Q9H094 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC5.2□□□□□ -1.58
NBPF3Q9H094 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
NBPF3Q9H094 SNX18P1Y-201ENST00000616231 511 ntBASIC5.2□□□□□ -1.58
NBPF3Q9H094 MIR6075-201ENST00000620782 95 ntBASIC5.2□□□□□ -1.58
NBPF3Q9H094 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
NBPF3Q9H094 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.2□□□□□ -1.58
NBPF3Q9H094 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NBPF3Q9H094 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
NBPF3Q9H094 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.2□□□□□ -1.58
NBPF3Q9H094 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NBPF3Q9H094 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NBPF3Q9H094 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NBPF3Q9H094 SPRR2C-201ENST00000290702 219 ntBASIC5.19□□□□□ -1.58
NBPF3Q9H094 RNU1-20P-201ENST00000363314 162 ntBASIC5.19□□□□□ -1.58
NBPF3Q9H094 RNU1-100P-201ENST00000365255 165 ntBASIC5.19□□□□□ -1.58
NBPF3Q9H094 RNA5SP366-201ENST00000365454 123 ntBASIC5.19□□□□□ -1.58
NBPF3Q9H094 PPIAP31-201ENST00000405422 495 ntBASIC5.19□□□□□ -1.58
NBPF3Q9H094 MIR1263-201ENST00000408324 86 ntBASIC5.19□□□□□ -1.58
NBPF3Q9H094 MIR1278-201ENST00000408753 81 ntBASIC5.19□□□□□ -1.58
NBPF3Q9H094 NDUFS5P4-201ENST00000412983 318 ntBASIC5.19□□□□□ -1.58
NBPF3Q9H094 RPL21P10-201ENST00000463521 490 ntBASIC5.19□□□□□ -1.58
NBPF3Q9H094 RN7SL542P-201ENST00000467147 294 ntBASIC5.19□□□□□ -1.58
NBPF3Q9H094 RN7SL132P-201ENST00000478131 296 ntBASIC5.19□□□□□ -1.58
NBPF3Q9H094 RN7SL691P-201ENST00000494487 301 ntBASIC5.19□□□□□ -1.58
NBPF3Q9H094 RNA5SP154-201ENST00000516193 111 ntBASIC5.19□□□□□ -1.58
NBPF3Q9H094 RNA5SP143-201ENST00000516936 115 ntBASIC5.19□□□□□ -1.58
NBPF3Q9H094 SNORA31.23-201ENST00000517219 133 ntBASIC5.19□□□□□ -1.58
NBPF3Q9H094 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.19□□□□□ -1.58
NBPF3Q9H094 IGKV1-22-201ENST00000524313 326 ntBASIC5.19□□□□□ -1.58
NBPF3Q9H094 MIR3921-201ENST00000577308 85 ntBASIC5.19□□□□□ -1.58
NBPF3Q9H094 AC053481.4-201ENST00000583164 216 ntBASIC5.19□□□□□ -1.58
NBPF3Q9H094 AC024220.1-201ENST00000603675 484 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms