Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC010168.2-201ENST00000562691 5428 ntBASIC3.28□□□□□ -1.88
KRTAP3-3Q9BYR6 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
KRTAP3-3Q9BYR6 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-3Q9BYR6 RNA5SP188-201ENST00000362916 129 ntBASIC3.28□□□□□ -1.88
KRTAP3-3Q9BYR6 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-3Q9BYR6 AC244023.1-201ENST00000426884 112 ntBASIC3.28□□□□□ -1.88
KRTAP3-3Q9BYR6 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC3.28□□□□□ -1.88
KRTAP3-3Q9BYR6 AC097359.1-201ENST00000447946 463 ntBASIC3.28□□□□□ -1.88
KRTAP3-3Q9BYR6 AC005517.1-201ENST00000452091 489 ntBASIC3.28□□□□□ -1.88
KRTAP3-3Q9BYR6 RN7SL182P-201ENST00000496499 300 ntBASIC3.28□□□□□ -1.88
KRTAP3-3Q9BYR6 IGLV3-6-201ENST00000523937 250 ntBASIC3.28□□□□□ -1.88
KRTAP3-3Q9BYR6 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC3.28□□□□□ -1.88
KRTAP3-3Q9BYR6 RN7SL664P-201ENST00000584239 305 ntBASIC3.28□□□□□ -1.88
KRTAP3-3Q9BYR6 AC005786.1-201ENST00000588553 154 ntBASIC3.28□□□□□ -1.88
KRTAP3-3Q9BYR6 AC242498.1-201ENST00000604134 111 ntBASIC3.28□□□□□ -1.88
KRTAP3-3Q9BYR6 AL136139.1-201ENST00000605568 222 ntBASIC3.28□□□□□ -1.88
KRTAP3-3Q9BYR6 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC3.28□□□□□ -1.88
KRTAP3-3Q9BYR6 Six3os1_4.1-201ENST00000615706 324 ntBASIC3.28□□□□□ -1.88
KRTAP3-3Q9BYR6 TCL6_3.1-201ENST00000619064 137 ntBASIC3.28□□□□□ -1.88
KRTAP3-3Q9BYR6 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-3Q9BYR6 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-3Q9BYR6 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-3Q9BYR6 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-3Q9BYR6 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-3Q9BYR6 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-3Q9BYR6 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-3Q9BYR6 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-3Q9BYR6 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC3.28□□□□□ -1.89
KRTAP3-3Q9BYR6 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-3Q9BYR6 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-3Q9BYR6 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC3.27□□□□□ -1.89
KRTAP3-3Q9BYR6 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-3Q9BYR6 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-3Q9BYR6 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-3Q9BYR6 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC3.27□□□□□ -1.89
KRTAP3-3Q9BYR6 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-3Q9BYR6 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-3Q9BYR6 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-3Q9BYR6 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-3Q9BYR6 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-3Q9BYR6 MIR30D-201ENST00000362283 70 ntBASIC3.27□□□□□ -1.89
KRTAP3-3Q9BYR6 RNU6-23P-201ENST00000363283 107 ntBASIC3.27□□□□□ -1.89
KRTAP3-3Q9BYR6 MIR128-2-201ENST00000384893 84 ntBASIC3.27□□□□□ -1.89
KRTAP3-3Q9BYR6 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.27□□□□□ -1.89
KRTAP3-3Q9BYR6 RN7SKP236-201ENST00000410635 284 ntBASIC3.27□□□□□ -1.89
KRTAP3-3Q9BYR6 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC3.27□□□□□ -1.89
KRTAP3-3Q9BYR6 RN7SL518P-201ENST00000491887 280 ntBASIC3.27□□□□□ -1.89
KRTAP3-3Q9BYR6 RNA5SP445-201ENST00000515889 115 ntBASIC3.27□□□□□ -1.89
KRTAP3-3Q9BYR6 IGKV1D-22-201ENST00000518953 324 ntBASIC3.27□□□□□ -1.89
KRTAP3-3Q9BYR6 AL049869.4-201ENST00000555669 178 ntBASIC3.27□□□□□ -1.89
KRTAP3-3Q9BYR6 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.27□□□□□ -1.89
KRTAP3-3Q9BYR6 AC092960.1-201ENST00000604762 351 ntBASIC3.27□□□□□ -1.89
KRTAP3-3Q9BYR6 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-3Q9BYR6 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-3Q9BYR6 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC3.27□□□□□ -1.89
KRTAP3-3Q9BYR6 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
KRTAP3-3Q9BYR6 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-3Q9BYR6 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-3Q9BYR6 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP3-3Q9BYR6 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 MIR101-2-201ENST00000362195 79 ntBASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 RNA5SP114-201ENST00000363780 113 ntBASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 RNU1-55P-201ENST00000365510 158 ntBASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 RNU1-46P-201ENST00000384425 164 ntBASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 Y_RNA.588-201ENST00000391254 102 ntBASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 AL354714.5-201ENST00000450131 590 ntBASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 AC008897.1-201ENST00000494006 347 ntBASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 RNA5SP278-201ENST00000517055 102 ntBASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 AC100770.1-201ENST00000532310 322 ntBASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 AC140063.1-201ENST00000541343 259 ntBASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 GTF3AP2-201ENST00000557014 266 ntBASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 MIR4262-201ENST00000578394 54 ntBASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 AC000068.2-201ENST00000608816 460 ntBASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 5S_rRNA.23-201ENST00000612086 102 ntBASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 AC091953.3-201ENST00000623220 236 ntBASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 HBG1-202ENST00000632727 369 ntTSL 3 BASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 AL662795.2-201ENST00000624252 3706 ntBASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 POT1-202ENST00000393329 3950 ntTSL 5 BASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC3.26□□□□□ -1.89
KRTAP3-3Q9BYR6 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms