Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NCBP3Q53F19 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
NCBP3Q53F19 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
NCBP3Q53F19 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC6.93□□□□□ -1.3
NCBP3Q53F19 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NCBP3Q53F19 U3.2-201ENST00000362981 210 ntBASIC6.93□□□□□ -1.3
NCBP3Q53F19 MIR1182-201ENST00000408363 97 ntBASIC6.93□□□□□ -1.3
NCBP3Q53F19 RNU6-938P-201ENST00000411285 103 ntBASIC6.93□□□□□ -1.3
NCBP3Q53F19 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC6.93□□□□□ -1.3
NCBP3Q53F19 RNU6-267P-201ENST00000516714 103 ntBASIC6.93□□□□□ -1.3
NCBP3Q53F19 IGLV2-28-201ENST00000520681 304 ntBASIC6.93□□□□□ -1.3
NCBP3Q53F19 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NCBP3Q53F19 AC092490.3-201ENST00000545370 572 ntBASIC6.93□□□□□ -1.3
NCBP3Q53F19 AL110118.1-201ENST00000553543 400 ntBASIC6.93□□□□□ -1.3
NCBP3Q53F19 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
NCBP3Q53F19 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
NCBP3Q53F19 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.93□□□□□ -1.3
NCBP3Q53F19 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
NCBP3Q53F19 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NCBP3Q53F19 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NCBP3Q53F19 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC6.92□□□□□ -1.3
NCBP3Q53F19 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
NCBP3Q53F19 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
NCBP3Q53F19 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NCBP3Q53F19 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NCBP3Q53F19 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
NCBP3Q53F19 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
NCBP3Q53F19 FAM35DP-201ENST00000323387 2712 ntBASIC6.92□□□□□ -1.3
NCBP3Q53F19 RNU6-1189P-201ENST00000383958 107 ntBASIC6.92□□□□□ -1.3
NCBP3Q53F19 SNORA67-201ENST00000384423 137 ntBASIC6.92□□□□□ -1.3
NCBP3Q53F19 Y_RNA.507-201ENST00000384500 99 ntBASIC6.92□□□□□ -1.3
NCBP3Q53F19 AC023424.1-201ENST00000496058 459 ntBASIC6.92□□□□□ -1.3
NCBP3Q53F19 AC113410.1-201ENST00000505029 247 ntBASIC6.92□□□□□ -1.3
NCBP3Q53F19 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC6.92□□□□□ -1.3
NCBP3Q53F19 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.92□□□□□ -1.3
NCBP3Q53F19 MIR4305-201ENST00000583252 102 ntBASIC6.92□□□□□ -1.3
NCBP3Q53F19 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.92□□□□□ -1.3
NCBP3Q53F19 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NCBP3Q53F19 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC6.92□□□□□ -1.3
NCBP3Q53F19 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.92□□□□□ -1.3
NCBP3Q53F19 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.92□□□□□ -1.3
NCBP3Q53F19 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.91□□□□□ -1.3
NCBP3Q53F19 Y_RNA.253-201ENST00000364562 112 ntBASIC6.91□□□□□ -1.3
NCBP3Q53F19 Y_RNA.410-201ENST00000383992 113 ntBASIC6.91□□□□□ -1.3
NCBP3Q53F19 MIR520G-201ENST00000385064 90 ntBASIC6.91□□□□□ -1.3
NCBP3Q53F19 RN7SKP156-201ENST00000410308 342 ntBASIC6.91□□□□□ -1.3
NCBP3Q53F19 AC233266.1-201ENST00000454518 96 ntBASIC6.91□□□□□ -1.3
NCBP3Q53F19 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.91□□□□□ -1.3
NCBP3Q53F19 RN7SL708P-201ENST00000580952 299 ntBASIC6.91□□□□□ -1.3
NCBP3Q53F19 AC242852.1-201ENST00000612151 96 ntBASIC6.91□□□□□ -1.3
NCBP3Q53F19 AC244015.1-201ENST00000622301 99 ntBASIC6.91□□□□□ -1.3
NCBP3Q53F19 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
NCBP3Q53F19 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC6.91□□□□□ -1.3
NCBP3Q53F19 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC6.91□□□□□ -1.3
NCBP3Q53F19 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC6.91□□□□□ -1.3
NCBP3Q53F19 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NCBP3Q53F19 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
NCBP3Q53F19 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.91□□□□□ -1.3
NCBP3Q53F19 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NCBP3Q53F19 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NCBP3Q53F19 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
NCBP3Q53F19 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NCBP3Q53F19 RNA5SP90-201ENST00000364801 99 ntBASIC6.9□□□□□ -1.3
NCBP3Q53F19 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC6.9□□□□□ -1.3
NCBP3Q53F19 RNU1-77P-201ENST00000390868 162 ntBASIC6.9□□□□□ -1.3
NCBP3Q53F19 MIR1286-201ENST00000408112 78 ntBASIC6.9□□□□□ -1.3
NCBP3Q53F19 MIR1178-201ENST00000408396 91 ntBASIC6.9□□□□□ -1.3
NCBP3Q53F19 AC096949.1-201ENST00000412047 152 ntBASIC6.9□□□□□ -1.3
NCBP3Q53F19 BTF3P4-201ENST00000418852 495 ntBASIC6.9□□□□□ -1.3
NCBP3Q53F19 BX510359.3-201ENST00000422168 306 ntBASIC6.9□□□□□ -1.3
NCBP3Q53F19 HMGN2P27-201ENST00000427352 270 ntBASIC6.9□□□□□ -1.3
NCBP3Q53F19 RNU1-131P-201ENST00000458943 161 ntBASIC6.9□□□□□ -1.3
NCBP3Q53F19 MIR548Z-201ENST00000584743 97 ntBASIC6.9□□□□□ -1.3
NCBP3Q53F19 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.9□□□□□ -1.3
NCBP3Q53F19 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
NCBP3Q53F19 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NCBP3Q53F19 AC118658.2-201ENST00000618697 459 ntBASIC6.9□□□□□ -1.3
NCBP3Q53F19 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
NCBP3Q53F19 AC239868.2-201ENST00000564237 4527 ntBASIC6.9□□□□□ -1.31
NCBP3Q53F19 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NCBP3Q53F19 AC010733.2-201ENST00000589496 5702 ntBASIC6.89□□□□□ -1.31
NCBP3Q53F19 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NCBP3Q53F19 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC6.89□□□□□ -1.31
NCBP3Q53F19 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
NCBP3Q53F19 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
NCBP3Q53F19 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
NCBP3Q53F19 Y_RNA.190-201ENST00000363964 101 ntBASIC6.89□□□□□ -1.31
NCBP3Q53F19 RNU1-133P-201ENST00000364867 167 ntBASIC6.89□□□□□ -1.31
NCBP3Q53F19 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NCBP3Q53F19 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
NCBP3Q53F19 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC6.89□□□□□ -1.31
NCBP3Q53F19 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
NCBP3Q53F19 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
NCBP3Q53F19 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC6.89□□□□□ -1.31
NCBP3Q53F19 AP000542.2-201ENST00000623199 6179 ntBASIC6.88□□□□□ -1.31
NCBP3Q53F19 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NCBP3Q53F19 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
NCBP3Q53F19 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NCBP3Q53F19 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
NCBP3Q53F19 SNORD115-13-201ENST00000363358 82 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 151.5 ms