Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SNORA27.3-201ENST00000364937 134 ntBASIC-0.04□□□□□ -2.42
UBA52P62987 SNORA4.2-201ENST00000365313 147 ntBASIC-0.04□□□□□ -2.42
UBA52P62987 RNU4-45P-201ENST00000365469 141 ntBASIC-0.04□□□□□ -2.42
UBA52P62987 SNORA4.3-201ENST00000365564 137 ntBASIC-0.04□□□□□ -2.42
UBA52P62987 SNORA80D-201ENST00000384488 135 ntBASIC-0.04□□□□□ -2.42
UBA52P62987 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-0.04□□□□□ -2.42
UBA52P62987 USP9YP14-201ENST00000430663 563 ntBASIC-0.04□□□□□ -2.42
UBA52P62987 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC-0.04□□□□□ -2.42
UBA52P62987 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC-0.04□□□□□ -2.42
UBA52P62987 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-0.04□□□□□ -2.42
UBA52P62987 RPL39P6-201ENST00000448289 150 ntBASIC-0.04□□□□□ -2.42
UBA52P62987 MTCYBP1-201ENST00000454315 1119 ntBASIC-0.04□□□□□ -2.42
UBA52P62987 OFD1P7Y-201ENST00000454643 1155 ntBASIC-0.04□□□□□ -2.42
UBA52P62987 AC104982.1-201ENST00000478775 574 ntBASIC-0.04□□□□□ -2.42
UBA52P62987 WDR78-207ENST00000488333 613 ntTSL 3 BASIC-0.04□□□□□ -2.42
UBA52P62987 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC-0.04□□□□□ -2.42
UBA52P62987 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.04□□□□□ -2.42
UBA52P62987 RNU6-714P-201ENST00000516963 103 ntBASIC-0.04□□□□□ -2.42
UBA52P62987 RN7SKP258-201ENST00000517151 304 ntBASIC-0.04□□□□□ -2.42
UBA52P62987 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.04□□□□□ -2.42
UBA52P62987 MIR5589-201ENST00000579442 60 ntBASIC-0.04□□□□□ -2.42
UBA52P62987 VN1R83P-201ENST00000595685 445 ntBASIC-0.04□□□□□ -2.42
UBA52P62987 BNIP3P30-201ENST00000601184 574 ntBASIC-0.04□□□□□ -2.42
UBA52P62987 AC098483.2-201ENST00000603158 454 ntBASIC-0.04□□□□□ -2.42
UBA52P62987 AL358072.1-201ENST00000604156 575 ntBASIC-0.04□□□□□ -2.42
UBA52P62987 AC009268.2-201ENST00000621925 457 ntBASIC-0.04□□□□□ -2.42
UBA52P62987 RNU6-1123P-201ENST00000362347 106 ntBASIC-0.05□□□□□ -2.42
UBA52P62987 SNORD3E-201ENST00000362899 217 ntBASIC-0.05□□□□□ -2.42
UBA52P62987 SNORD44.1-201ENST00000363202 61 ntBASIC-0.05□□□□□ -2.42
UBA52P62987 RNU6-950P-201ENST00000384651 107 ntBASIC-0.05□□□□□ -2.42
UBA52P62987 RNU6-700P-201ENST00000391043 107 ntBASIC-0.05□□□□□ -2.42
UBA52P62987 AL357139.1-201ENST00000407792 426 ntBASIC-0.05□□□□□ -2.42
UBA52P62987 FABP5P4-201ENST00000437203 171 ntBASIC-0.05□□□□□ -2.42
UBA52P62987 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-0.05□□□□□ -2.42
UBA52P62987 AL031313.1-201ENST00000448435 256 ntBASIC-0.05□□□□□ -2.42
UBA52P62987 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.05□□□□□ -2.42
UBA52P62987 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC-0.05□□□□□ -2.42
UBA52P62987 RPL23AP54-201ENST00000495129 419 ntBASIC-0.05□□□□□ -2.42
UBA52P62987 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC-0.05□□□□□ -2.42
UBA52P62987 AC121161.1-201ENST00000510606 652 ntBASIC-0.05□□□□□ -2.42
UBA52P62987 AC011406.1-201ENST00000512440 370 ntBASIC-0.05□□□□□ -2.42
UBA52P62987 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC-0.05□□□□□ -2.42
UBA52P62987 RNU6-572P-201ENST00000516724 80 ntBASIC-0.05□□□□□ -2.42
UBA52P62987 AC022861.1-201ENST00000522981 663 ntBASIC-0.05□□□□□ -2.42
UBA52P62987 AL132657.2-201ENST00000564417 358 ntBASIC-0.05□□□□□ -2.42
UBA52P62987 MIR5695-201ENST00000579717 85 ntBASIC-0.05□□□□□ -2.42
UBA52P62987 MIR4802-201ENST00000581881 80 ntBASIC-0.05□□□□□ -2.42
UBA52P62987 AL391001.1-201ENST00000602747 715 ntBASIC-0.05□□□□□ -2.42
UBA52P62987 AC063943.3-201ENST00000615562 356 ntBASIC-0.05□□□□□ -2.42
UBA52P62987 SNORD3E-202ENST00000627253 216 ntBASIC-0.05□□□□□ -2.42
UBA52P62987 ANKRD36BP1-202ENST00000604892 1417 ntBASIC-0.05□□□□□ -2.42
UBA52P62987 AL159152.1-201ENST00000635019 2587 ntBASIC-0.06□□□□□ -2.42
UBA52P62987 RNU6-28P-201ENST00000362378 107 ntBASIC-0.06□□□□□ -2.42
UBA52P62987 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.06□□□□□ -2.42
UBA52P62987 RNU6-343P-201ENST00000364709 104 ntBASIC-0.06□□□□□ -2.42
UBA52P62987 RNY1P8-201ENST00000383970 114 ntBASIC-0.06□□□□□ -2.42
UBA52P62987 MIR329-1-201ENST00000385028 80 ntBASIC-0.06□□□□□ -2.42
UBA52P62987 RNU2-23P-201ENST00000410545 195 ntBASIC-0.06□□□□□ -2.42
UBA52P62987 AC123900.1-201ENST00000420390 96 ntBASIC-0.06□□□□□ -2.42
UBA52P62987 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC-0.06□□□□□ -2.42
UBA52P62987 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC-0.06□□□□□ -2.42
UBA52P62987 RNU7-21P-201ENST00000459430 62 ntBASIC-0.06□□□□□ -2.42
UBA52P62987 MTND1P3-201ENST00000484956 952 ntBASIC-0.06□□□□□ -2.42
UBA52P62987 SNORA31.3-201ENST00000516029 96 ntBASIC-0.06□□□□□ -2.42
UBA52P62987 AC011979.2-201ENST00000527568 352 ntBASIC-0.06□□□□□ -2.42
UBA52P62987 MIR4742-201ENST00000581069 85 ntBASIC-0.06□□□□□ -2.42
UBA52P62987 MIR4637-201ENST00000582405 84 ntBASIC-0.06□□□□□ -2.42
UBA52P62987 AL031281.1-201ENST00000604049 488 ntBASIC-0.06□□□□□ -2.42
UBA52P62987 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC-0.06□□□□□ -2.42
UBA52P62987 AL360219.1-201ENST00000610230 366 ntBASIC-0.06□□□□□ -2.42
UBA52P62987 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC-0.06□□□□□ -2.42
UBA52P62987 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.07□□□□□ -2.42
UBA52P62987 MIR411-201ENST00000362239 96 ntBASIC-0.07□□□□□ -2.42
UBA52P62987 RNU6-862P-201ENST00000362804 105 ntBASIC-0.07□□□□□ -2.42
UBA52P62987 RNU6-796P-201ENST00000391086 107 ntBASIC-0.07□□□□□ -2.42
UBA52P62987 MIR1265-201ENST00000408444 86 ntBASIC-0.07□□□□□ -2.42
UBA52P62987 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC-0.07□□□□□ -2.42
UBA52P62987 RNU6-575P-201ENST00000411326 105 ntBASIC-0.07□□□□□ -2.42
UBA52P62987 UBE2V1P10-201ENST00000414685 269 ntBASIC-0.07□□□□□ -2.42
UBA52P62987 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC-0.07□□□□□ -2.42
UBA52P62987 MTCO2P5-201ENST00000422621 426 ntBASIC-0.07□□□□□ -2.42
UBA52P62987 AL591704.1-201ENST00000432574 275 ntBASIC-0.07□□□□□ -2.42
UBA52P62987 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.07□□□□□ -2.42
UBA52P62987 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC-0.07□□□□□ -2.42
UBA52P62987 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.07□□□□□ -2.42
UBA52P62987 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC-0.07□□□□□ -2.42
UBA52P62987 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.07□□□□□ -2.42
UBA52P62987 MTCYBP33-201ENST00000575007 1130 ntBASIC-0.07□□□□□ -2.42
UBA52P62987 Z98751.3-201ENST00000604447 521 ntBASIC-0.07□□□□□ -2.42
UBA52P62987 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-0.07□□□□□ -2.42
UBA52P62987 AC087588.2-201ENST00000617667 426 ntBASIC-0.07□□□□□ -2.42
UBA52P62987 PCMTD1P7-201ENST00000634506 357 ntBASIC-0.07□□□□□ -2.42
UBA52P62987 MIR3529-201ENST00000637713 78 ntBASIC-0.07□□□□□ -2.42
UBA52P62987 AC245060.5-201ENST00000610778 3293 ntBASIC-0.07□□□□□ -2.42
UBA52P62987 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.08□□□□□ -2.42
UBA52P62987 RNU6-923P-201ENST00000364753 107 ntBASIC-0.08□□□□□ -2.42
UBA52P62987 SUGT1P1-201ENST00000379514 476 ntBASIC-0.08□□□□□ -2.42
UBA52P62987 RNU6-163P-201ENST00000384396 106 ntBASIC-0.08□□□□□ -2.42
UBA52P62987 MTND1P21-201ENST00000412991 285 ntBASIC-0.08□□□□□ -2.42
UBA52P62987 RPL21P24-201ENST00000413752 448 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms