Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC090515.1-201ENST00000465295 476 ntBASIC2.15□□□□□ -2.07
PEX3P56589 MTCYBP18-201ENST00000501056 747 ntBASIC2.15□□□□□ -2.07
PEX3P56589 YWHAEP4-201ENST00000505390 198 ntBASIC2.15□□□□□ -2.07
PEX3P56589 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.15□□□□□ -2.07
PEX3P56589 RNU6-718P-201ENST00000516166 105 ntBASIC2.15□□□□□ -2.07
PEX3P56589 AC069113.1-201ENST00000517763 267 ntBASIC2.15□□□□□ -2.07
PEX3P56589 AC109329.1-201ENST00000518744 317 ntBASIC2.15□□□□□ -2.07
PEX3P56589 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.15□□□□□ -2.07
PEX3P56589 RPS3AP23-202ENST00000574601 686 ntBASIC2.15□□□□□ -2.07
PEX3P56589 AC105245.1-201ENST00000581934 244 ntBASIC2.15□□□□□ -2.07
PEX3P56589 VN1R107P-201ENST00000601784 209 ntBASIC2.15□□□□□ -2.07
PEX3P56589 Z82243.1-201ENST00000609432 473 ntBASIC2.15□□□□□ -2.07
PEX3P56589 AC009318.2-201ENST00000610917 651 ntBASIC2.15□□□□□ -2.07
PEX3P56589 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.15□□□□□ -2.07
PEX3P56589 AC007014.2-201ENST00000615581 479 ntBASIC2.15□□□□□ -2.07
PEX3P56589 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
PEX3P56589 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
PEX3P56589 KPNA2P1-201ENST00000458289 1591 ntBASIC2.15□□□□□ -2.07
PEX3P56589 AC027514.1-201ENST00000588561 1603 ntBASIC2.14□□□□□ -2.07
PEX3P56589 AC138393.1-203ENST00000327086 343 ntBASIC2.14□□□□□ -2.07
PEX3P56589 RNA5SP37-201ENST00000365420 130 ntBASIC2.14□□□□□ -2.07
PEX3P56589 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
PEX3P56589 EIF4E2P1-201ENST00000393781 255 ntBASIC2.14□□□□□ -2.07
PEX3P56589 RNU2-23P-201ENST00000410545 195 ntBASIC2.14□□□□□ -2.07
PEX3P56589 RNU6-1148P-201ENST00000410992 104 ntBASIC2.14□□□□□ -2.07
PEX3P56589 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.14□□□□□ -2.07
PEX3P56589 AC097463.2-201ENST00000421074 142 ntBASIC2.14□□□□□ -2.07
PEX3P56589 EIF4EP4-201ENST00000424916 578 ntBASIC2.14□□□□□ -2.07
PEX3P56589 AC008267.5-201ENST00000424928 265 ntBASIC2.14□□□□□ -2.07
PEX3P56589 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.14□□□□□ -2.07
PEX3P56589 snoU13.26-201ENST00000459452 105 ntBASIC2.14□□□□□ -2.07
PEX3P56589 AC112771.1-201ENST00000463581 102 ntBASIC2.14□□□□□ -2.07
PEX3P56589 RPL36AP48-201ENST00000485521 314 ntBASIC2.14□□□□□ -2.07
PEX3P56589 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.14□□□□□ -2.07
PEX3P56589 AC023141.11-201ENST00000508864 202 ntBASIC2.14□□□□□ -2.07
PEX3P56589 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.14□□□□□ -2.07
PEX3P56589 SMURF2P1-201ENST00000514992 481 ntBASIC2.14□□□□□ -2.07
PEX3P56589 SNORA19.2-201ENST00000516013 114 ntBASIC2.14□□□□□ -2.07
PEX3P56589 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.14□□□□□ -2.07
PEX3P56589 AC010186.2-204ENST00000537668 439 ntBASIC2.14□□□□□ -2.07
PEX3P56589 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.14□□□□□ -2.07
PEX3P56589 CTHRC1P1-201ENST00000605383 469 ntBASIC2.14□□□□□ -2.07
PEX3P56589 RNU6-85P-201ENST00000605989 107 ntBASIC2.14□□□□□ -2.07
PEX3P56589 AL121757.2-201ENST00000611223 313 ntBASIC2.14□□□□□ -2.07
PEX3P56589 AC092794.1-201ENST00000612734 582 ntBASIC2.14□□□□□ -2.07
PEX3P56589 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
PEX3P56589 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.14□□□□□ -2.07
PEX3P56589 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
PEX3P56589 SNORD56.1-201ENST00000362913 68 ntBASIC2.13□□□□□ -2.07
PEX3P56589 Y_RNA.295-201ENST00000364918 102 ntBASIC2.13□□□□□ -2.07
PEX3P56589 RNA5SP118-201ENST00000410385 109 ntBASIC2.13□□□□□ -2.07
PEX3P56589 RNU2-20P-201ENST00000410425 191 ntBASIC2.13□□□□□ -2.07
PEX3P56589 RN7SKP284-201ENST00000411002 343 ntBASIC2.13□□□□□ -2.07
PEX3P56589 CYCSP48-201ENST00000417124 323 ntBASIC2.13□□□□□ -2.07
PEX3P56589 AC003685.2-201ENST00000422795 395 ntBASIC2.13□□□□□ -2.07
PEX3P56589 AIMP1P2-201ENST00000425294 312 ntBASIC2.13□□□□□ -2.07
PEX3P56589 SNAP23P1-201ENST00000433229 246 ntBASIC2.13□□□□□ -2.07
PEX3P56589 HMGN2P3-201ENST00000433603 273 ntBASIC2.13□□□□□ -2.07
PEX3P56589 HMGN2P5-201ENST00000436882 273 ntBASIC2.13□□□□□ -2.07
PEX3P56589 AC243964.1-201ENST00000441814 261 ntBASIC2.13□□□□□ -2.07
PEX3P56589 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.13□□□□□ -2.07
PEX3P56589 AC083904.1-201ENST00000487828 231 ntBASIC2.13□□□□□ -2.07
PEX3P56589 FAM206BP-201ENST00000510179 541 ntBASIC2.13□□□□□ -2.07
PEX3P56589 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.13□□□□□ -2.07
PEX3P56589 SNORA31.18-201ENST00000517043 134 ntBASIC2.13□□□□□ -2.07
PEX3P56589 MTND4LP26-201ENST00000518144 282 ntBASIC2.13□□□□□ -2.07
PEX3P56589 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.13□□□□□ -2.07
PEX3P56589 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.13□□□□□ -2.07
PEX3P56589 BNIP3P16-201ENST00000589779 534 ntBASIC2.13□□□□□ -2.07
PEX3P56589 AC009233.1-201ENST00000616477 371 ntBASIC2.13□□□□□ -2.07
PEX3P56589 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
PEX3P56589 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.13□□□□□ -2.07
PEX3P56589 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.12□□□□□ -2.07
PEX3P56589 RNU6-827P-201ENST00000365553 106 ntBASIC2.12□□□□□ -2.07
PEX3P56589 Y_RNA.453-201ENST00000384223 109 ntBASIC2.12□□□□□ -2.07
PEX3P56589 MIR186-201ENST00000384988 86 ntBASIC2.12□□□□□ -2.07
PEX3P56589 MIR218-1-201ENST00000384999 110 ntBASIC2.12□□□□□ -2.07
PEX3P56589 SNORD73A-201ENST00000386062 65 ntBASIC2.12□□□□□ -2.07
PEX3P56589 RNU6-332P-201ENST00000391193 108 ntBASIC2.12□□□□□ -2.07
PEX3P56589 U3.40-201ENST00000408706 208 ntBASIC2.12□□□□□ -2.07
PEX3P56589 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.12□□□□□ -2.07
PEX3P56589 EIF1AXP1-201ENST00000419267 435 ntBASIC2.12□□□□□ -2.07
PEX3P56589 ZNF885P-201ENST00000420174 1098 ntBASIC2.12□□□□□ -2.07
PEX3P56589 RPS3AP44-201ENST00000425466 790 ntBASIC2.12□□□□□ -2.07
PEX3P56589 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.12□□□□□ -2.07
PEX3P56589 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.12□□□□□ -2.07
PEX3P56589 RPS27P21-201ENST00000486977 252 ntBASIC2.12□□□□□ -2.07
PEX3P56589 RPL22P13-201ENST00000493291 347 ntBASIC2.12□□□□□ -2.07
PEX3P56589 AC069439.1-201ENST00000494739 167 ntBASIC2.12□□□□□ -2.07
PEX3P56589 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.12□□□□□ -2.07
PEX3P56589 SNORA25.11-201ENST00000515935 105 ntBASIC2.12□□□□□ -2.07
PEX3P56589 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.12□□□□□ -2.07
PEX3P56589 SNORA59B-202ENST00000578183 701 ntBASIC2.12□□□□□ -2.07
PEX3P56589 MIR4658-201ENST00000584344 65 ntBASIC2.12□□□□□ -2.07
PEX3P56589 AL713866.2-201ENST00000603579 219 ntBASIC2.12□□□□□ -2.07
PEX3P56589 AC069294.1-201ENST00000608397 350 ntBASIC2.12□□□□□ -2.07
PEX3P56589 AC096772.1-201ENST00000609146 564 ntBASIC2.12□□□□□ -2.07
PEX3P56589 AC097372.5-201ENST00000623665 376 ntBASIC2.12□□□□□ -2.07
PEX3P56589 AC090617.10-201ENST00000624308 134 ntBASIC2.12□□□□□ -2.07
PEX3P56589 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms