Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 RNU6-961P-201ENST00000363893 105 ntBASIC3.77□□□□□ -1.81
CCNFP41002 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCNFP41002 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.77□□□□□ -1.81
CCNFP41002 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.77□□□□□ -1.81
CCNFP41002 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.77□□□□□ -1.81
CCNFP41002 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.77□□□□□ -1.81
CCNFP41002 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.77□□□□□ -1.81
CCNFP41002 AL031183.1-201ENST00000457667 207 ntBASIC3.77□□□□□ -1.81
CCNFP41002 AC073901.1-201ENST00000462471 408 ntBASIC3.77□□□□□ -1.81
CCNFP41002 AC117440.1-201ENST00000474107 571 ntBASIC3.77□□□□□ -1.81
CCNFP41002 SNORA40.9-201ENST00000515895 93 ntBASIC3.77□□□□□ -1.81
CCNFP41002 SNORA25.14-201ENST00000516481 132 ntBASIC3.77□□□□□ -1.81
CCNFP41002 RNU6-567P-201ENST00000516746 107 ntBASIC3.77□□□□□ -1.81
CCNFP41002 AL078605.1-201ENST00000603529 500 ntBASIC3.77□□□□□ -1.81
CCNFP41002 AC010999.1-201ENST00000611856 324 ntBASIC3.77□□□□□ -1.81
CCNFP41002 MIR6875-201ENST00000617506 72 ntBASIC3.77□□□□□ -1.81
CCNFP41002 SNORD98-201ENST00000636377 67 ntBASIC3.77□□□□□ -1.81
CCNFP41002 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.77□□□□□ -1.81
CCNFP41002 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCNFP41002 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.77□□□□□ -1.81
CCNFP41002 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCNFP41002 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCNFP41002 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.77□□□□□ -1.81
CCNFP41002 AC002543.1-201ENST00000299783 1954 ntBASIC3.76□□□□□ -1.81
CCNFP41002 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.76□□□□□ -1.81
CCNFP41002 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCNFP41002 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCNFP41002 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCNFP41002 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CCNFP41002 RNU6-137P-201ENST00000363680 108 ntBASIC3.76□□□□□ -1.81
CCNFP41002 Y_RNA.200-201ENST00000364018 102 ntBASIC3.76□□□□□ -1.81
CCNFP41002 Y_RNA.569-201ENST00000384749 103 ntBASIC3.76□□□□□ -1.81
CCNFP41002 MIR147B-201ENST00000390185 80 ntBASIC3.76□□□□□ -1.81
CCNFP41002 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CCNFP41002 SNORA3.3-201ENST00000408712 125 ntBASIC3.76□□□□□ -1.81
CCNFP41002 Y_RNA.595-201ENST00000410403 105 ntBASIC3.76□□□□□ -1.81
CCNFP41002 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.76□□□□□ -1.81
CCNFP41002 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.76□□□□□ -1.81
CCNFP41002 NDUFB1P1-201ENST00000435191 180 ntBASIC3.76□□□□□ -1.81
CCNFP41002 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.76□□□□□ -1.81
CCNFP41002 RNA5SP54-201ENST00000516951 92 ntBASIC3.76□□□□□ -1.81
CCNFP41002 AC022080.3-201ENST00000544433 482 ntBASIC3.76□□□□□ -1.81
CCNFP41002 MIR4643-201ENST00000577473 78 ntBASIC3.76□□□□□ -1.81
CCNFP41002 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.76□□□□□ -1.81
CCNFP41002 AL162713.1-201ENST00000604480 262 ntBASIC3.76□□□□□ -1.81
CCNFP41002 SNORA62.6-201ENST00000606322 83 ntBASIC3.76□□□□□ -1.81
CCNFP41002 RMST_8.1-201ENST00000610287 165 ntBASIC3.76□□□□□ -1.81
CCNFP41002 RNVU1-4-201ENST00000612985 164 ntBASIC3.76□□□□□ -1.81
CCNFP41002 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCNFP41002 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CCNFP41002 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
CCNFP41002 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCNFP41002 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCNFP41002 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.75□□□□□ -1.81
CCNFP41002 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.75□□□□□ -1.81
CCNFP41002 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCNFP41002 Y_RNA.29-201ENST00000362570 113 ntBASIC3.75□□□□□ -1.81
CCNFP41002 Y_RNA.44-201ENST00000362676 108 ntBASIC3.75□□□□□ -1.81
CCNFP41002 RNU4-56P-201ENST00000364700 142 ntBASIC3.75□□□□□ -1.81
CCNFP41002 RNU6-487P-201ENST00000365430 104 ntBASIC3.75□□□□□ -1.81
CCNFP41002 RNU6-1145P-201ENST00000384246 107 ntBASIC3.75□□□□□ -1.81
CCNFP41002 MIR208B-201ENST00000401172 77 ntBASIC3.75□□□□□ -1.81
CCNFP41002 MIR1298-201ENST00000408783 112 ntBASIC3.75□□□□□ -1.81
CCNFP41002 AC017079.2-201ENST00000416102 485 ntBASIC3.75□□□□□ -1.81
CCNFP41002 AC096649.2-201ENST00000416186 393 ntBASIC3.75□□□□□ -1.81
CCNFP41002 AL591419.1-201ENST00000427423 339 ntBASIC3.75□□□□□ -1.81
CCNFP41002 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.75□□□□□ -1.81
CCNFP41002 AL441985.1-201ENST00000457727 251 ntBASIC3.75□□□□□ -1.81
CCNFP41002 RPL26P26-201ENST00000480251 434 ntBASIC3.75□□□□□ -1.81
CCNFP41002 RN7SL323P-201ENST00000494712 295 ntBASIC3.75□□□□□ -1.81
CCNFP41002 RNU2-31P-201ENST00000516954 155 ntBASIC3.75□□□□□ -1.81
CCNFP41002 RNU6-711P-201ENST00000517255 106 ntBASIC3.75□□□□□ -1.81
CCNFP41002 AC115990.1-201ENST00000526957 301 ntBASIC3.75□□□□□ -1.81
CCNFP41002 AC106785.1-201ENST00000565935 262 ntBASIC3.75□□□□□ -1.81
CCNFP41002 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.75□□□□□ -1.81
CCNFP41002 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.75□□□□□ -1.81
CCNFP41002 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.75□□□□□ -1.81
CCNFP41002 AC091152.3-201ENST00000604227 325 ntBASIC3.75□□□□□ -1.81
CCNFP41002 AC006001.4-201ENST00000622243 395 ntBASIC3.75□□□□□ -1.81
CCNFP41002 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CCNFP41002 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCNFP41002 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCNFP41002 SNORA25.1-201ENST00000362326 128 ntBASIC3.74□□□□□ -1.81
CCNFP41002 RNU6-1175P-201ENST00000365200 107 ntBASIC3.74□□□□□ -1.81
CCNFP41002 MIR134-201ENST00000385258 73 ntBASIC3.74□□□□□ -1.81
CCNFP41002 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.74□□□□□ -1.81
CCNFP41002 NDUFB4P10-201ENST00000452541 359 ntBASIC3.74□□□□□ -1.81
CCNFP41002 RPL23AP3-201ENST00000453844 468 ntBASIC3.74□□□□□ -1.81
CCNFP41002 RN7SL330P-201ENST00000469709 307 ntBASIC3.74□□□□□ -1.81
CCNFP41002 AC025281.1-201ENST00000567026 265 ntBASIC3.74□□□□□ -1.81
CCNFP41002 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.74□□□□□ -1.81
CCNFP41002 AL357075.2-201ENST00000614906 189 ntBASIC3.74□□□□□ -1.81
CCNFP41002 AL354798.1-201ENST00000622505 329 ntBASIC3.74□□□□□ -1.81
CCNFP41002 IGHVIII-44-202ENST00000636235 289 ntBASIC3.74□□□□□ -1.81
CCNFP41002 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CCNFP41002 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCNFP41002 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
CCNFP41002 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
CCNFP41002 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCNFP41002 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms