Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC009093.8-201ENST00000641769 292 ntBASIC3.21□□□□□ -1.9
CD40P25942 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CD40P25942 AC018555.1-201ENST00000567548 1980 ntBASIC3.21□□□□□ -1.9
CD40P25942 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.21□□□□□ -1.9
CD40P25942 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CD40P25942 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CD40P25942 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CD40P25942 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.2□□□□□ -1.9
CD40P25942 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.2□□□□□ -1.9
CD40P25942 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CD40P25942 Y_RNA.188-201ENST00000363952 111 ntBASIC3.2□□□□□ -1.9
CD40P25942 MRPL35P1-201ENST00000404272 572 ntBASIC3.2□□□□□ -1.9
CD40P25942 EIF4EP4-201ENST00000424916 578 ntBASIC3.2□□□□□ -1.9
CD40P25942 CBX3P6-201ENST00000430257 527 ntBASIC3.2□□□□□ -1.9
CD40P25942 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.2□□□□□ -1.9
CD40P25942 AC010095.1-201ENST00000443543 144 ntBASIC3.2□□□□□ -1.9
CD40P25942 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.2□□□□□ -1.9
CD40P25942 AC106707.2-201ENST00000484182 374 ntBASIC3.2□□□□□ -1.9
CD40P25942 TRBV12-2-201ENST00000489763 344 ntBASIC3.2□□□□□ -1.9
CD40P25942 RNA5SP112-201ENST00000515937 99 ntBASIC3.2□□□□□ -1.9
CD40P25942 RNU6-1271P-201ENST00000517049 105 ntBASIC3.2□□□□□ -1.9
CD40P25942 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.2□□□□□ -1.9
CD40P25942 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.2□□□□□ -1.9
CD40P25942 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.2□□□□□ -1.9
CD40P25942 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.2□□□□□ -1.9
CD40P25942 MIR4300-201ENST00000581016 96 ntBASIC3.2□□□□□ -1.9
CD40P25942 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.2□□□□□ -1.9
CD40P25942 AC010999.1-201ENST00000611856 324 ntBASIC3.2□□□□□ -1.9
CD40P25942 AP000553.6-201ENST00000641242 118 ntBASIC3.2□□□□□ -1.9
CD40P25942 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.2□□□□□ -1.9
CD40P25942 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
CD40P25942 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.2□□□□□ -1.9
CD40P25942 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.2□□□□□ -1.9
CD40P25942 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.19□□□□□ -1.9
CD40P25942 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CD40P25942 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CD40P25942 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CD40P25942 BX322639.1-202ENST00000423987 2213 ntBASIC3.19□□□□□ -1.9
CD40P25942 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CD40P25942 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CD40P25942 RNU6-937P-201ENST00000384325 106 ntBASIC3.19□□□□□ -1.9
CD40P25942 MIR7-3-201ENST00000384898 110 ntBASIC3.19□□□□□ -1.9
CD40P25942 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CD40P25942 RPS29P4-201ENST00000414733 161 ntBASIC3.19□□□□□ -1.9
CD40P25942 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.19□□□□□ -1.9
CD40P25942 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.19□□□□□ -1.9
CD40P25942 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.19□□□□□ -1.9
CD40P25942 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.19□□□□□ -1.9
CD40P25942 SNORD105B-201ENST00000458770 79 ntBASIC3.19□□□□□ -1.9
CD40P25942 RPS29P12-201ENST00000460178 152 ntBASIC3.19□□□□□ -1.9
CD40P25942 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.19□□□□□ -1.9
CD40P25942 IGKV2-23-201ENST00000518729 323 ntBASIC3.19□□□□□ -1.9
CD40P25942 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.19□□□□□ -1.9
CD40P25942 RPL30P11-203ENST00000598995 310 ntBASIC3.19□□□□□ -1.9
CD40P25942 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.19□□□□□ -1.9
CD40P25942 AC107294.3-201ENST00000609211 526 ntBASIC3.19□□□□□ -1.9
CD40P25942 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.19□□□□□ -1.9
CD40P25942 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CD40P25942 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.19□□□□□ -1.9
CD40P25942 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CD40P25942 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CD40P25942 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CD40P25942 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.19□□□□□ -1.9
CD40P25942 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CD40P25942 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CD40P25942 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CD40P25942 LINC02555-201ENST00000563933 1951 ntBASIC3.18□□□□□ -1.9
CD40P25942 RNA5SP119-201ENST00000362715 117 ntBASIC3.18□□□□□ -1.9
CD40P25942 Y_RNA.307-201ENST00000365022 117 ntBASIC3.18□□□□□ -1.9
CD40P25942 RNU6-1145P-201ENST00000384246 107 ntBASIC3.18□□□□□ -1.9
CD40P25942 SNORA46.1-201ENST00000391069 153 ntBASIC3.18□□□□□ -1.9
CD40P25942 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.18□□□□□ -1.9
CD40P25942 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.18□□□□□ -1.9
CD40P25942 YME1L1P1-201ENST00000429435 297 ntBASIC3.18□□□□□ -1.9
CD40P25942 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.18□□□□□ -1.9
CD40P25942 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.18□□□□□ -1.9
CD40P25942 AC146507.2-201ENST00000460608 476 ntBASIC3.18□□□□□ -1.9
CD40P25942 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.18□□□□□ -1.9
CD40P25942 TRBVB-201ENST00000477100 408 ntBASIC3.18□□□□□ -1.9
CD40P25942 RN7SL283P-201ENST00000489055 303 ntBASIC3.18□□□□□ -1.9
CD40P25942 RNU6-408P-201ENST00000515910 100 ntBASIC3.18□□□□□ -1.9
CD40P25942 SCARNA11.3-201ENST00000517276 130 ntBASIC3.18□□□□□ -1.9
CD40P25942 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.18□□□□□ -1.9
CD40P25942 AL670379.2-201ENST00000604983 252 ntBASIC3.18□□□□□ -1.9
CD40P25942 BRDTP1-201ENST00000605735 677 ntBASIC3.18□□□□□ -1.9
CD40P25942 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CD40P25942 U6.104-201ENST00000637979 90 ntBASIC3.18□□□□□ -1.9
CD40P25942 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.18□□□□□ -1.9
CD40P25942 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CD40P25942 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CD40P25942 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CD40P25942 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
CD40P25942 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CD40P25942 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CD40P25942 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.17□□□□□ -1.9
CD40P25942 RNU6-486P-201ENST00000363116 107 ntBASIC3.17□□□□□ -1.9
CD40P25942 RNU5F-3P-201ENST00000363767 117 ntBASIC3.17□□□□□ -1.9
CD40P25942 U3.9-201ENST00000363823 204 ntBASIC3.17□□□□□ -1.9
CD40P25942 RNU6-245P-201ENST00000384020 107 ntBASIC3.17□□□□□ -1.9
CD40P25942 MIR215-201ENST00000384858 110 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms