Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.45□□□□□ -1.54
CD44P16070 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CD44P16070 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.44□□□□□ -1.54
CD44P16070 AC018630.2-201ENST00000534866 2403 ntBASIC5.44□□□□□ -1.54
CD44P16070 RNU6-1010P-201ENST00000362757 107 ntBASIC5.44□□□□□ -1.54
CD44P16070 Y_RNA.242-201ENST00000364473 110 ntBASIC5.44□□□□□ -1.54
CD44P16070 RNA5SP455-201ENST00000365190 119 ntBASIC5.44□□□□□ -1.54
CD44P16070 RNU6-1197P-201ENST00000391183 107 ntBASIC5.44□□□□□ -1.54
CD44P16070 AL133475.1-201ENST00000404414 305 ntBASIC5.44□□□□□ -1.54
CD44P16070 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.44□□□□□ -1.54
CD44P16070 HMGN1P7-201ENST00000491722 313 ntBASIC5.44□□□□□ -1.54
CD44P16070 RNU6-1098P-201ENST00000516772 96 ntBASIC5.44□□□□□ -1.54
CD44P16070 AC034105.4-201ENST00000568304 277 ntBASIC5.44□□□□□ -1.54
CD44P16070 MIR3134-201ENST00000579433 74 ntBASIC5.44□□□□□ -1.54
CD44P16070 AC011445.2-201ENST00000599274 173 ntBASIC5.44□□□□□ -1.54
CD44P16070 AL672167.1-203ENST00000641299 2975 ntBASIC5.44□□□□□ -1.54
CD44P16070 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CD44P16070 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CD44P16070 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CD44P16070 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CD44P16070 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CD44P16070 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
CD44P16070 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
CD44P16070 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CD44P16070 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CD44P16070 RNU4-16P-201ENST00000364737 141 ntBASIC5.43□□□□□ -1.54
CD44P16070 RNA5SP428-201ENST00000365129 132 ntBASIC5.43□□□□□ -1.54
CD44P16070 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CD44P16070 RNU6-129P-201ENST00000391022 107 ntBASIC5.43□□□□□ -1.54
CD44P16070 AC079355.1-201ENST00000421770 223 ntBASIC5.43□□□□□ -1.54
CD44P16070 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.43□□□□□ -1.54
CD44P16070 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.43□□□□□ -1.54
CD44P16070 DCLRE1CP1-201ENST00000454630 470 ntBASIC5.43□□□□□ -1.54
CD44P16070 RNU5F-4P-201ENST00000516581 114 ntBASIC5.43□□□□□ -1.54
CD44P16070 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CD44P16070 AL161713.1-201ENST00000555538 145 ntBASIC5.43□□□□□ -1.54
CD44P16070 MIR4778-201ENST00000577635 80 ntBASIC5.43□□□□□ -1.54
CD44P16070 MIR4489-201ENST00000578869 62 ntBASIC5.43□□□□□ -1.54
CD44P16070 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.43□□□□□ -1.54
CD44P16070 AC011447.4-201ENST00000587562 111 ntBASIC5.43□□□□□ -1.54
CD44P16070 HNRNPDLP4-201ENST00000605144 301 ntBASIC5.43□□□□□ -1.54
CD44P16070 AC069200.1-201ENST00000609511 323 ntBASIC5.43□□□□□ -1.54
CD44P16070 AC096577.2-201ENST00000611455 153 ntBASIC5.43□□□□□ -1.54
CD44P16070 MIR8069-1-201ENST00000616627 86 ntBASIC5.43□□□□□ -1.54
CD44P16070 MIR8069-2-201ENST00000621412 86 ntBASIC5.43□□□□□ -1.54
CD44P16070 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.43□□□□□ -1.54
CD44P16070 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.43□□□□□ -1.54
CD44P16070 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC5.43□□□□□ -1.54
CD44P16070 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.42□□□□□ -1.54
CD44P16070 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CD44P16070 AC026241.1-201ENST00000517873 2142 ntBASIC5.42□□□□□ -1.54
CD44P16070 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.42□□□□□ -1.54
CD44P16070 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CD44P16070 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CD44P16070 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.42□□□□□ -1.54
CD44P16070 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.42□□□□□ -1.54
CD44P16070 Y_RNA.57-201ENST00000362806 113 ntBASIC5.42□□□□□ -1.54
CD44P16070 RNU1-106P-201ENST00000384382 164 ntBASIC5.42□□□□□ -1.54
CD44P16070 MIR195-201ENST00000385194 87 ntBASIC5.42□□□□□ -1.54
CD44P16070 MIR300-201ENST00000401138 83 ntBASIC5.42□□□□□ -1.54
CD44P16070 MIR1271-201ENST00000408537 86 ntBASIC5.42□□□□□ -1.54
CD44P16070 RN7SKP206-201ENST00000410823 293 ntBASIC5.42□□□□□ -1.54
CD44P16070 AL645608.4-201ENST00000423619 154 ntBASIC5.42□□□□□ -1.54
CD44P16070 AL161932.1-201ENST00000437408 146 ntBASIC5.42□□□□□ -1.54
CD44P16070 RN7SL172P-201ENST00000460535 303 ntBASIC5.42□□□□□ -1.54
CD44P16070 AC008953.1-201ENST00000497334 318 ntBASIC5.42□□□□□ -1.54
CD44P16070 RNU6-513P-201ENST00000516104 104 ntBASIC5.42□□□□□ -1.54
CD44P16070 AC004812.1-201ENST00000540773 146 ntBASIC5.42□□□□□ -1.54
CD44P16070 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC5.42□□□□□ -1.54
CD44P16070 RPL23AP97-201ENST00000568955 471 ntBASIC5.42□□□□□ -1.54
CD44P16070 RN7SL703P-201ENST00000578485 302 ntBASIC5.42□□□□□ -1.54
CD44P16070 MIR3176-201ENST00000582210 90 ntBASIC5.42□□□□□ -1.54
CD44P16070 MIR4753-201ENST00000585119 83 ntBASIC5.42□□□□□ -1.54
CD44P16070 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.42□□□□□ -1.54
CD44P16070 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CD44P16070 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.42□□□□□ -1.54
CD44P16070 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CD44P16070 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CD44P16070 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
CD44P16070 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CD44P16070 AC008163.1-202ENST00000636004 2889 ntBASIC5.41□□□□□ -1.54
CD44P16070 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC5.41□□□□□ -1.54
CD44P16070 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC5.41□□□□□ -1.54
CD44P16070 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CD44P16070 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CD44P16070 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.41□□□□□ -1.54
CD44P16070 AC000403.1-201ENST00000613696 3585 ntBASIC5.41□□□□□ -1.54
CD44P16070 SNORD115-37-201ENST00000363768 82 ntBASIC5.41□□□□□ -1.54
CD44P16070 Y_RNA.440-201ENST00000384120 114 ntBASIC5.41□□□□□ -1.54
CD44P16070 RNU6-975P-201ENST00000384296 105 ntBASIC5.41□□□□□ -1.54
CD44P16070 RNU6-411P-201ENST00000384451 107 ntBASIC5.41□□□□□ -1.54
CD44P16070 AL356535.1-201ENST00000440335 398 ntBASIC5.41□□□□□ -1.54
CD44P16070 RPS26P39-201ENST00000469206 341 ntBASIC5.41□□□□□ -1.54
CD44P16070 RN7SKP260-201ENST00000516907 149 ntBASIC5.41□□□□□ -1.54
CD44P16070 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CD44P16070 MIR1269B-201ENST00000580405 75 ntBASIC5.41□□□□□ -1.54
CD44P16070 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
CD44P16070 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC5.41□□□□□ -1.54
CD44P16070 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CD44P16070 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms