Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 AL356292.1-201ENST00000283110 373 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 RNA5SP125-201ENST00000364843 120 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 RNU6-534P-201ENST00000364877 106 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 RNU6-827P-201ENST00000365553 106 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 MIR186-201ENST00000384988 86 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 SNORD115-47-201ENST00000391226 86 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 RNU2-2P-201ENST00000410396 191 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 Y_RNA.615-201ENST00000410769 117 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 AC138623.1-201ENST00000418060 216 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 AIMP1P2-201ENST00000425294 312 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 AL591043.1-201ENST00000432461 424 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 IFNA11P-201ENST00000446352 526 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 AC012308.1-201ENST00000451232 178 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 snoU13.14-201ENST00000459372 104 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 HMGN2P26-201ENST00000463169 339 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 RPL30P12-201ENST00000474666 353 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 AC083904.1-201ENST00000487828 231 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 Y_RNA.665-201ENST00000516177 98 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 AC103996.1-201ENST00000555468 102 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 DEFB122-202ENST00000569013 197 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 VN1R107P-201ENST00000601784 209 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 AL713866.2-201ENST00000603579 219 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 U2.15-201ENST00000611544 191 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 U2.16-201ENST00000613119 191 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 U2.12-201ENST00000613778 191 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 U2.20-201ENST00000613956 192 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 U2.9-201ENST00000615427 191 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 uc_338.15-201ENST00000615470 191 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 HMGB1P24-202ENST00000615653 685 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 U2.11-201ENST00000616345 191 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 U2.2-201ENST00000616535 191 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 U2.3-201ENST00000617785 191 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 U2.19-201ENST00000618602 191 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 RNU2-1-201ENST00000618664 191 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 U2.6-201ENST00000619225 191 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 U2.5-201ENST00000619465 191 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 U2.10-201ENST00000620268 191 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
NEDD8-MDP1E9PL57 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.09□□□□□ -2.07
NEDD8-MDP1E9PL57 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.09□□□□□ -2.07
NEDD8-MDP1E9PL57 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
NEDD8-MDP1E9PL57 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
NEDD8-MDP1E9PL57 SNORA51.11-201ENST00000384442 131 ntBASIC2.09□□□□□ -2.07
NEDD8-MDP1E9PL57 SNORD73A-201ENST00000386062 65 ntBASIC2.09□□□□□ -2.07
NEDD8-MDP1E9PL57 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
NEDD8-MDP1E9PL57 SNRPEP10-201ENST00000420249 274 ntBASIC2.09□□□□□ -2.07
NEDD8-MDP1E9PL57 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.09□□□□□ -2.07
NEDD8-MDP1E9PL57 WARS2P1-201ENST00000429678 537 ntBASIC2.09□□□□□ -2.07
NEDD8-MDP1E9PL57 MRPS10P2-201ENST00000431226 381 ntBASIC2.09□□□□□ -2.07
NEDD8-MDP1E9PL57 USP9YP8-201ENST00000441913 500 ntBASIC2.09□□□□□ -2.07
NEDD8-MDP1E9PL57 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.09□□□□□ -2.07
NEDD8-MDP1E9PL57 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.09□□□□□ -2.07
NEDD8-MDP1E9PL57 AC108210.2-201ENST00000503681 201 ntBASIC2.09□□□□□ -2.07
NEDD8-MDP1E9PL57 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.09□□□□□ -2.07
NEDD8-MDP1E9PL57 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.09□□□□□ -2.07
NEDD8-MDP1E9PL57 AP005597.4-201ENST00000526762 229 ntBASIC2.09□□□□□ -2.07
NEDD8-MDP1E9PL57 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.09□□□□□ -2.07
NEDD8-MDP1E9PL57 MIR4769-201ENST00000584126 77 ntBASIC2.09□□□□□ -2.07
NEDD8-MDP1E9PL57 MIR4658-201ENST00000584344 65 ntBASIC2.09□□□□□ -2.07
NEDD8-MDP1E9PL57 BNIP3P16-201ENST00000589779 534 ntBASIC2.09□□□□□ -2.07
NEDD8-MDP1E9PL57 AC073410.2-201ENST00000603240 332 ntBASIC2.09□□□□□ -2.07
NEDD8-MDP1E9PL57 AC025754.2-201ENST00000606491 432 ntBASIC2.09□□□□□ -2.07
NEDD8-MDP1E9PL57 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
NEDD8-MDP1E9PL57 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.09□□□□□ -2.07
NEDD8-MDP1E9PL57 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.09□□□□□ -2.07
NEDD8-MDP1E9PL57 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
NEDD8-MDP1E9PL57 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
NEDD8-MDP1E9PL57 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
NEDD8-MDP1E9PL57 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.08□□□□□ -2.08
NEDD8-MDP1E9PL57 RNU6-1285P-201ENST00000363480 105 ntBASIC2.08□□□□□ -2.08
NEDD8-MDP1E9PL57 RNU6-692P-201ENST00000384496 107 ntBASIC2.08□□□□□ -2.08
NEDD8-MDP1E9PL57 MIR544A-201ENST00000384855 91 ntBASIC2.08□□□□□ -2.08
NEDD8-MDP1E9PL57 MIR95-201ENST00000385072 81 ntBASIC2.08□□□□□ -2.08
NEDD8-MDP1E9PL57 RNU6-332P-201ENST00000391193 108 ntBASIC2.08□□□□□ -2.08
NEDD8-MDP1E9PL57 EIF4E2P1-201ENST00000393781 255 ntBASIC2.08□□□□□ -2.08
NEDD8-MDP1E9PL57 RNU6-293P-201ENST00000411259 106 ntBASIC2.08□□□□□ -2.08
NEDD8-MDP1E9PL57 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.08□□□□□ -2.08
NEDD8-MDP1E9PL57 FCF1P9-201ENST00000412546 282 ntBASIC2.08□□□□□ -2.08
NEDD8-MDP1E9PL57 CYCSP48-201ENST00000417124 323 ntBASIC2.08□□□□□ -2.08
NEDD8-MDP1E9PL57 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.08□□□□□ -2.08
NEDD8-MDP1E9PL57 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.08□□□□□ -2.08
NEDD8-MDP1E9PL57 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.08□□□□□ -2.08
NEDD8-MDP1E9PL57 RPL39P29-201ENST00000447779 157 ntBASIC2.08□□□□□ -2.08
NEDD8-MDP1E9PL57 AL031274.1-201ENST00000450334 232 ntBASIC2.08□□□□□ -2.08
NEDD8-MDP1E9PL57 RNU7-26P-201ENST00000458980 63 ntBASIC2.08□□□□□ -2.08
NEDD8-MDP1E9PL57 RPL23AP42-201ENST00000471152 471 ntBASIC2.08□□□□□ -2.08
NEDD8-MDP1E9PL57 AL121594.1-201ENST00000475906 575 ntBASIC2.08□□□□□ -2.08
NEDD8-MDP1E9PL57 AC140059.1-201ENST00000489238 361 ntBASIC2.08□□□□□ -2.08
NEDD8-MDP1E9PL57 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.08□□□□□ -2.08
NEDD8-MDP1E9PL57 RNU2-53P-201ENST00000516257 147 ntBASIC2.08□□□□□ -2.08
NEDD8-MDP1E9PL57 AC087854.1-201ENST00000519706 414 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms