Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.01□□□□□ -1.77
DDX41Q9UJV9 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.01□□□□□ -1.77
DDX41Q9UJV9 RNU1-75P-201ENST00000347264 129 ntBASIC4.01□□□□□ -1.77
DDX41Q9UJV9 Y_RNA.27-201ENST00000362540 103 ntBASIC4.01□□□□□ -1.77
DDX41Q9UJV9 RNU1-76P-201ENST00000362903 159 ntBASIC4.01□□□□□ -1.77
DDX41Q9UJV9 RNU5B-2P-201ENST00000363036 113 ntBASIC4.01□□□□□ -1.77
DDX41Q9UJV9 SNORD114-19-201ENST00000363072 75 ntBASIC4.01□□□□□ -1.77
DDX41Q9UJV9 RNU6-238P-201ENST00000363313 106 ntBASIC4.01□□□□□ -1.77
DDX41Q9UJV9 Y_RNA.210-201ENST00000364161 110 ntBASIC4.01□□□□□ -1.77
DDX41Q9UJV9 Y_RNA.401-201ENST00000383965 117 ntBASIC4.01□□□□□ -1.77
DDX41Q9UJV9 AC017079.2-201ENST00000416102 485 ntBASIC4.01□□□□□ -1.77
DDX41Q9UJV9 AL365496.1-201ENST00000426885 215 ntBASIC4.01□□□□□ -1.77
DDX41Q9UJV9 USP9YP16-201ENST00000430287 407 ntBASIC4.01□□□□□ -1.77
DDX41Q9UJV9 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.01□□□□□ -1.77
DDX41Q9UJV9 AC073910.1-201ENST00000445047 438 ntBASIC4.01□□□□□ -1.77
DDX41Q9UJV9 USP9YP23-201ENST00000455085 407 ntBASIC4.01□□□□□ -1.77
DDX41Q9UJV9 AF186996.7-201ENST00000492781 209 ntBASIC4.01□□□□□ -1.77
DDX41Q9UJV9 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.01□□□□□ -1.77
DDX41Q9UJV9 AL442163.3-201ENST00000554110 156 ntBASIC4.01□□□□□ -1.77
DDX41Q9UJV9 AL161670.1-201ENST00000554348 137 ntBASIC4.01□□□□□ -1.77
DDX41Q9UJV9 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.01□□□□□ -1.77
DDX41Q9UJV9 MIR4503-201ENST00000582187 83 ntBASIC4.01□□□□□ -1.77
DDX41Q9UJV9 U4.6-201ENST00000621618 127 ntBASIC4.01□□□□□ -1.77
DDX41Q9UJV9 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
DDX41Q9UJV9 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
DDX41Q9UJV9 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4□□□□□ -1.77
DDX41Q9UJV9 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
DDX41Q9UJV9 RNU4-35P-201ENST00000362588 141 ntBASIC4□□□□□ -1.77
DDX41Q9UJV9 Y_RNA.452-201ENST00000384202 108 ntBASIC4□□□□□ -1.77
DDX41Q9UJV9 Y_RNA.556-201ENST00000384677 113 ntBASIC4□□□□□ -1.77
DDX41Q9UJV9 SNORD17-201ENST00000390930 237 ntBASIC4□□□□□ -1.77
DDX41Q9UJV9 RNU6-1109P-201ENST00000391187 107 ntBASIC4□□□□□ -1.77
DDX41Q9UJV9 RPL21P75-201ENST00000396599 483 ntBASIC4□□□□□ -1.77
DDX41Q9UJV9 UBA52P6-201ENST00000399822 382 ntBASIC4□□□□□ -1.77
DDX41Q9UJV9 RPL21P28-201ENST00000401418 483 ntBASIC4□□□□□ -1.77
DDX41Q9UJV9 UBE2Q2P12-201ENST00000414573 204 ntBASIC4□□□□□ -1.77
DDX41Q9UJV9 AL590556.1-201ENST00000423231 483 ntBASIC4□□□□□ -1.77
DDX41Q9UJV9 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4□□□□□ -1.77
DDX41Q9UJV9 OSTCP8-201ENST00000445117 448 ntBASIC4□□□□□ -1.77
DDX41Q9UJV9 RPL21P39-201ENST00000463605 483 ntBASIC4□□□□□ -1.77
DDX41Q9UJV9 AC010655.3-201ENST00000478818 450 ntBASIC4□□□□□ -1.77
DDX41Q9UJV9 AC087190.1-201ENST00000484462 480 ntBASIC4□□□□□ -1.77
DDX41Q9UJV9 AC107032.1-201ENST00000485945 480 ntBASIC4□□□□□ -1.77
DDX41Q9UJV9 AC132942.1-201ENST00000486753 483 ntBASIC4□□□□□ -1.77
DDX41Q9UJV9 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4□□□□□ -1.77
DDX41Q9UJV9 AC093591.1-201ENST00000491435 481 ntBASIC4□□□□□ -1.77
DDX41Q9UJV9 RPL21P16-201ENST00000495531 483 ntBASIC4□□□□□ -1.77
DDX41Q9UJV9 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4□□□□□ -1.77
DDX41Q9UJV9 MIR5195-201ENST00000583555 115 ntBASIC4□□□□□ -1.77
DDX41Q9UJV9 MIR3149-201ENST00000584629 83 ntBASIC4□□□□□ -1.77
DDX41Q9UJV9 AC012493.2-201ENST00000595083 291 ntBASIC4□□□□□ -1.77
DDX41Q9UJV9 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4□□□□□ -1.77
DDX41Q9UJV9 DLEU2_2.2-201ENST00000615474 90 ntBASIC4□□□□□ -1.77
DDX41Q9UJV9 AL159153.1-201ENST00000619688 317 ntBASIC4□□□□□ -1.77
DDX41Q9UJV9 U4.1-201ENST00000620349 87 ntBASIC4□□□□□ -1.77
DDX41Q9UJV9 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
DDX41Q9UJV9 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
DDX41Q9UJV9 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
DDX41Q9UJV9 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
DDX41Q9UJV9 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
DDX41Q9UJV9 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
DDX41Q9UJV9 RNU6-212P-201ENST00000362642 104 ntBASIC3.99□□□□□ -1.77
DDX41Q9UJV9 RNU6-1010P-201ENST00000362757 107 ntBASIC3.99□□□□□ -1.77
DDX41Q9UJV9 RNU6-1285P-201ENST00000363480 105 ntBASIC3.99□□□□□ -1.77
DDX41Q9UJV9 AL356968.1-201ENST00000416622 474 ntBASIC3.99□□□□□ -1.77
DDX41Q9UJV9 CYCSP48-201ENST00000417124 323 ntBASIC3.99□□□□□ -1.77
DDX41Q9UJV9 AL590135.1-201ENST00000422215 156 ntBASIC3.99□□□□□ -1.77
DDX41Q9UJV9 AC019205.3-201ENST00000424573 156 ntBASIC3.99□□□□□ -1.77
DDX41Q9UJV9 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.99□□□□□ -1.77
DDX41Q9UJV9 IPO7P1-201ENST00000442031 636 ntBASIC3.99□□□□□ -1.77
DDX41Q9UJV9 AC016700.2-201ENST00000446011 156 ntBASIC3.99□□□□□ -1.77
DDX41Q9UJV9 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.99□□□□□ -1.77
DDX41Q9UJV9 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.99□□□□□ -1.77
DDX41Q9UJV9 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.99□□□□□ -1.77
DDX41Q9UJV9 RNU6-1143P-201ENST00000516125 104 ntBASIC3.99□□□□□ -1.77
DDX41Q9UJV9 RNU6-579P-201ENST00000516879 102 ntBASIC3.99□□□□□ -1.77
DDX41Q9UJV9 SNORA40.15-201ENST00000516884 107 ntBASIC3.99□□□□□ -1.77
DDX41Q9UJV9 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.99□□□□□ -1.77
DDX41Q9UJV9 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.99□□□□□ -1.77
DDX41Q9UJV9 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.99□□□□□ -1.77
DDX41Q9UJV9 MIR3136-201ENST00000583498 78 ntBASIC3.99□□□□□ -1.77
DDX41Q9UJV9 uc_338.14-201ENST00000613162 166 ntBASIC3.99□□□□□ -1.77
DDX41Q9UJV9 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.99□□□□□ -1.77
DDX41Q9UJV9 AP003355.3-201ENST00000623465 114 ntBASIC3.99□□□□□ -1.77
DDX41Q9UJV9 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.99□□□□□ -1.77
DDX41Q9UJV9 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.99□□□□□ -1.77
DDX41Q9UJV9 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
DDX41Q9UJV9 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
DDX41Q9UJV9 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.99□□□□□ -1.77
DDX41Q9UJV9 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
DDX41Q9UJV9 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.99□□□□□ -1.77
DDX41Q9UJV9 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.98□□□□□ -1.77
DDX41Q9UJV9 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
DDX41Q9UJV9 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
DDX41Q9UJV9 RNU6-137P-201ENST00000363680 108 ntBASIC3.98□□□□□ -1.77
DDX41Q9UJV9 Y_RNA.471-201ENST00000384312 102 ntBASIC3.98□□□□□ -1.77
DDX41Q9UJV9 RNU6-713P-201ENST00000384761 107 ntBASIC3.98□□□□□ -1.77
DDX41Q9UJV9 MIR568-201ENST00000385036 95 ntBASIC3.98□□□□□ -1.77
DDX41Q9UJV9 AL133475.1-201ENST00000404414 305 ntBASIC3.98□□□□□ -1.77
DDX41Q9UJV9 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms