Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 RNU6-1222P-201ENST00000384615 107 ntBASIC0.89□□□□□ -2.27
CCDC88CQ9P219 RNU6-293P-201ENST00000411259 106 ntBASIC0.89□□□□□ -2.27
CCDC88CQ9P219 RNU6-387P-201ENST00000411331 105 ntBASIC0.89□□□□□ -2.27
CCDC88CQ9P219 EEF1A1P40-201ENST00000412883 573 ntBASIC0.89□□□□□ -2.27
CCDC88CQ9P219 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.89□□□□□ -2.27
CCDC88CQ9P219 AL353752.1-201ENST00000454946 260 ntBASIC0.89□□□□□ -2.27
CCDC88CQ9P219 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.89□□□□□ -2.27
CCDC88CQ9P219 AC112206.3-201ENST00000514578 389 ntBASIC0.89□□□□□ -2.27
CCDC88CQ9P219 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.89□□□□□ -2.27
CCDC88CQ9P219 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.89□□□□□ -2.27
CCDC88CQ9P219 SUB1P4-201ENST00000566062 339 ntBASIC0.89□□□□□ -2.27
CCDC88CQ9P219 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.89□□□□□ -2.27
CCDC88CQ9P219 MIR5692A1-201ENST00000580523 69 ntBASIC0.89□□□□□ -2.27
CCDC88CQ9P219 AC007363.1-201ENST00000604736 620 ntBASIC0.89□□□□□ -2.27
CCDC88CQ9P219 AC008945.2-201ENST00000606056 604 ntBASIC0.89□□□□□ -2.27
CCDC88CQ9P219 Z82243.1-201ENST00000609432 473 ntBASIC0.89□□□□□ -2.27
CCDC88CQ9P219 AC022709.1-201ENST00000615967 87 ntBASIC0.89□□□□□ -2.27
CCDC88CQ9P219 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.89□□□□□ -2.27
CCDC88CQ9P219 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
CCDC88CQ9P219 SNORD3E-201ENST00000362899 217 ntBASIC0.89□□□□□ -2.27
CCDC88CQ9P219 RNU6-433P-201ENST00000363216 104 ntBASIC0.89□□□□□ -2.27
CCDC88CQ9P219 RNU6-769P-201ENST00000384407 104 ntBASIC0.89□□□□□ -2.27
CCDC88CQ9P219 Y_RNA.560-201ENST00000384689 102 ntBASIC0.89□□□□□ -2.27
CCDC88CQ9P219 RNU6-757P-201ENST00000410334 100 ntBASIC0.89□□□□□ -2.27
CCDC88CQ9P219 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.89□□□□□ -2.27
CCDC88CQ9P219 AL008987.1-201ENST00000415528 237 ntBASIC0.89□□□□□ -2.27
CCDC88CQ9P219 MTND5P2-201ENST00000442927 1142 ntBASIC0.89□□□□□ -2.27
CCDC88CQ9P219 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.89□□□□□ -2.27
CCDC88CQ9P219 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.89□□□□□ -2.27
CCDC88CQ9P219 AC018868.1-201ENST00000491307 315 ntBASIC0.89□□□□□ -2.27
CCDC88CQ9P219 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.89□□□□□ -2.27
CCDC88CQ9P219 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.89□□□□□ -2.27
CCDC88CQ9P219 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.89□□□□□ -2.27
CCDC88CQ9P219 AP006587.4-201ENST00000526053 529 ntBASIC0.89□□□□□ -2.27
CCDC88CQ9P219 AP003392.2-201ENST00000527269 208 ntBASIC0.89□□□□□ -2.27
CCDC88CQ9P219 MIR4698-201ENST00000577795 80 ntBASIC0.89□□□□□ -2.27
CCDC88CQ9P219 HMGN1P30-201ENST00000589286 268 ntBASIC0.89□□□□□ -2.27
CCDC88CQ9P219 AL355802.3-201ENST00000607571 545 ntBASIC0.89□□□□□ -2.27
CCDC88CQ9P219 AC108706.1-201ENST00000611053 297 ntBASIC0.89□□□□□ -2.27
CCDC88CQ9P219 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
CCDC88CQ9P219 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.88□□□□□ -2.27
CCDC88CQ9P219 RNU6-438P-201ENST00000365561 103 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 RNU6-1-201ENST00000383898 107 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 RNU6-42P-201ENST00000384165 107 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 RNU6-36P-201ENST00000384172 107 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 RNU6-4P-201ENST00000384205 107 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 RNU6-5P-201ENST00000384238 107 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 RNU6-3P-201ENST00000384314 107 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 RNU6-636P-201ENST00000384598 107 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 RNU6-2-201ENST00000384627 107 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 RNU6-9-201ENST00000384776 107 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 RNU6-33P-201ENST00000384793 107 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 MIR532-201ENST00000385025 91 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 CBX3P9-201ENST00000402326 552 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 BTF3L4P1-201ENST00000413813 468 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.88□□□□□ -2.27
CCDC88CQ9P219 AL022238.1-201ENST00000442557 355 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.88□□□□□ -2.27
CCDC88CQ9P219 MED28P2-201ENST00000475771 317 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.88□□□□□ -2.27
CCDC88CQ9P219 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.88□□□□□ -2.27
CCDC88CQ9P219 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.88□□□□□ -2.27
CCDC88CQ9P219 Y_RNA.687-201ENST00000516558 91 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 SNORA31.17-201ENST00000516953 127 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 RNU6-667P-201ENST00000517186 102 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 AC090888.2-201ENST00000559765 1144 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.88□□□□□ -2.27
CCDC88CQ9P219 CLIC4P2-201ENST00000601934 717 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 AC073410.2-201ENST00000603240 332 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 RNU6-6P-201ENST00000606623 107 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 AC024933.1-201ENST00000608472 348 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 AC130454.1-201ENST00000622948 401 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 AC090517.3-201ENST00000625170 141 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
CCDC88CQ9P219 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.88□□□□□ -2.27
CCDC88CQ9P219 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
CCDC88CQ9P219 RNU6-61P-201ENST00000365528 109 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 RNU6-26P-201ENST00000383985 107 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 Y_RNA.540-201ENST00000384638 111 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
CCDC88CQ9P219 SNORA12-201ENST00000391162 147 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 AL133475.1-201ENST00000404414 305 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 Y_RNA.597-201ENST00000410463 100 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 RNU2-8P-201ENST00000410727 190 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 MTND4P20-201ENST00000424125 869 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 RPL22P17-201ENST00000438729 315 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 DUXAP8-207ENST00000456786 622 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.88□□□□□ -2.27
CCDC88CQ9P219 MTCYBP40-201ENST00000509390 1135 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 RNU6-567P-201ENST00000516746 107 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 AP001372.4-201ENST00000524889 472 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 AC021231.3-201ENST00000558497 370 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 AC092325.1-201ENST00000566449 554 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.88□□□□□ -2.27
CCDC88CQ9P219 AC022022.2-201ENST00000602989 360 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 AL136363.2-201ENST00000604173 851 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 AC016597.2-201ENST00000613256 341 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.88□□□□□ -2.27
CCDC88CQ9P219 AL607023.1-201ENST00000620045 248 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms