Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 AC004908.3-201ENST00000610248 625 ntBASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 AL132822.1-201ENST00000617063 513 ntBASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 AC124864.2-201ENST00000624736 186 ntBASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 SNORD98-201ENST00000636377 67 ntBASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CCL28Q9NRJ3 Y_RNA.194-201ENST00000363985 102 ntBASIC1.59□□□□□ -2.15
CCL28Q9NRJ3 RNU4-24P-201ENST00000364565 139 ntBASIC1.59□□□□□ -2.15
CCL28Q9NRJ3 SNORD32A-201ENST00000364805 84 ntBASIC1.59□□□□□ -2.15
CCL28Q9NRJ3 SNORA40.19-201ENST00000390846 128 ntBASIC1.59□□□□□ -2.15
CCL28Q9NRJ3 RPL17P50-201ENST00000396131 546 ntBASIC1.59□□□□□ -2.15
CCL28Q9NRJ3 RN7SKP61-201ENST00000410642 295 ntBASIC1.59□□□□□ -2.15
CCL28Q9NRJ3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.59□□□□□ -2.15
CCL28Q9NRJ3 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.59□□□□□ -2.15
CCL28Q9NRJ3 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.59□□□□□ -2.15
CCL28Q9NRJ3 CBX3P6-201ENST00000430257 527 ntBASIC1.59□□□□□ -2.15
CCL28Q9NRJ3 IFNA20P-201ENST00000436840 528 ntBASIC1.59□□□□□ -2.15
CCL28Q9NRJ3 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.59□□□□□ -2.15
CCL28Q9NRJ3 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.59□□□□□ -2.15
CCL28Q9NRJ3 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.59□□□□□ -2.15
CCL28Q9NRJ3 TPTE2P5-203ENST00000458118 728 ntBASIC1.59□□□□□ -2.15
CCL28Q9NRJ3 SNRPGP7-201ENST00000469016 106 ntBASIC1.59□□□□□ -2.15
CCL28Q9NRJ3 AL049873.1-201ENST00000480540 376 ntBASIC1.59□□□□□ -2.15
CCL28Q9NRJ3 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CCL28Q9NRJ3 AC105313.1-201ENST00000509121 353 ntBASIC1.59□□□□□ -2.15
CCL28Q9NRJ3 AC008413.1-201ENST00000511864 177 ntBASIC1.59□□□□□ -2.15
CCL28Q9NRJ3 RNU6-835P-201ENST00000516974 104 ntBASIC1.59□□□□□ -2.15
CCL28Q9NRJ3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.59□□□□□ -2.15
CCL28Q9NRJ3 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.59□□□□□ -2.15
CCL28Q9NRJ3 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.59□□□□□ -2.15
CCL28Q9NRJ3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.59□□□□□ -2.15
CCL28Q9NRJ3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.59□□□□□ -2.15
CCL28Q9NRJ3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.59□□□□□ -2.15
CCL28Q9NRJ3 MIR5694-201ENST00000581190 76 ntBASIC1.59□□□□□ -2.15
CCL28Q9NRJ3 AC080013.6-201ENST00000606185 215 ntBASIC1.59□□□□□ -2.15
CCL28Q9NRJ3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.59□□□□□ -2.15
CCL28Q9NRJ3 AC103705.1-201ENST00000619013 241 ntBASIC1.59□□□□□ -2.15
CCL28Q9NRJ3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
CCL28Q9NRJ3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 AL596028.1-201ENST00000326971 197 ntBASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 RNU4-66P-201ENST00000365199 138 ntBASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 RNU4-20P-201ENST00000365601 151 ntBASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 SNORA6-201ENST00000384033 151 ntBASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 RNU6-38P-201ENST00000384085 107 ntBASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 CALM2P3-201ENST00000400429 449 ntBASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 RNU6-648P-201ENST00000410190 107 ntBASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 POLHP1-201ENST00000411806 470 ntBASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 HMGN2P19-201ENST00000425149 265 ntBASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 RPL23AP95-201ENST00000426806 265 ntBASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 TIMM9P3-201ENST00000428659 274 ntBASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 AC244670.1-201ENST00000436879 112 ntBASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 IPO7P1-201ENST00000442031 636 ntBASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 PSPHP1-201ENST00000450062 261 ntBASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 RNU6-333P-201ENST00000459117 107 ntBASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 AC091885.1-201ENST00000506658 268 ntBASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 Y_RNA.693-201ENST00000516641 110 ntBASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 RNU6-965P-201ENST00000516721 96 ntBASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 AL118558.2-201ENST00000556294 238 ntBASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 AC092747.3-201ENST00000603769 301 ntBASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 AC103591.3-201ENST00000608684 209 ntBASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 AC063943.3-201ENST00000615562 356 ntBASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
CCL28Q9NRJ3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.57□□□□□ -2.16
CCL28Q9NRJ3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CCL28Q9NRJ3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
CCL28Q9NRJ3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.57□□□□□ -2.16
CCL28Q9NRJ3 AC092268.1-201ENST00000342691 405 ntBASIC1.57□□□□□ -2.16
CCL28Q9NRJ3 RNU4-15P-201ENST00000362613 141 ntBASIC1.57□□□□□ -2.16
CCL28Q9NRJ3 XGY1-201ENST00000381172 446 ntBASIC1.57□□□□□ -2.16
CCL28Q9NRJ3 RNU6-142P-201ENST00000384019 107 ntBASIC1.57□□□□□ -2.16
CCL28Q9NRJ3 MIR518A2-201ENST00000384966 87 ntBASIC1.57□□□□□ -2.16
CCL28Q9NRJ3 SNORA26.3-201ENST00000391119 136 ntBASIC1.57□□□□□ -2.16
CCL28Q9NRJ3 AL590135.1-201ENST00000422215 156 ntBASIC1.57□□□□□ -2.16
CCL28Q9NRJ3 AC019205.3-201ENST00000424573 156 ntBASIC1.57□□□□□ -2.16
CCL28Q9NRJ3 AL356320.1-201ENST00000429616 163 ntBASIC1.57□□□□□ -2.16
CCL28Q9NRJ3 MTCO2P3-201ENST00000442543 421 ntBASIC1.57□□□□□ -2.16
CCL28Q9NRJ3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.57□□□□□ -2.16
CCL28Q9NRJ3 AC016700.2-201ENST00000446011 156 ntBASIC1.57□□□□□ -2.16
CCL28Q9NRJ3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.57□□□□□ -2.16
CCL28Q9NRJ3 PRELID3BP1-201ENST00000457142 540 ntBASIC1.57□□□□□ -2.16
CCL28Q9NRJ3 RPL21P99-201ENST00000480369 423 ntBASIC1.57□□□□□ -2.16
CCL28Q9NRJ3 AC015911.1-201ENST00000495111 156 ntBASIC1.57□□□□□ -2.16
CCL28Q9NRJ3 AC145146.1-201ENST00000496370 254 ntBASIC1.57□□□□□ -2.16
CCL28Q9NRJ3 Y_RNA.654-201ENST00000497848 106 ntBASIC1.57□□□□□ -2.16
CCL28Q9NRJ3 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.57□□□□□ -2.16
CCL28Q9NRJ3 AC009646.1-201ENST00000510455 318 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms