Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SSBP4Q9BWG4 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SSBP4Q9BWG4 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
SSBP4Q9BWG4 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SSBP4Q9BWG4 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SSBP4Q9BWG4 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
SSBP4Q9BWG4 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC3.62□□□□□ -1.83
SSBP4Q9BWG4 RNU6-820P-201ENST00000384273 107 ntBASIC3.62□□□□□ -1.83
SSBP4Q9BWG4 SNORA67-201ENST00000384423 137 ntBASIC3.62□□□□□ -1.83
SSBP4Q9BWG4 MIR570-201ENST00000384917 97 ntBASIC3.62□□□□□ -1.83
SSBP4Q9BWG4 MIR93-201ENST00000385024 80 ntBASIC3.62□□□□□ -1.83
SSBP4Q9BWG4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SSBP4Q9BWG4 RNU6-440P-201ENST00000390882 105 ntBASIC3.62□□□□□ -1.83
SSBP4Q9BWG4 RN7SKP100-201ENST00000411258 284 ntBASIC3.62□□□□□ -1.83
SSBP4Q9BWG4 AC023449.1-201ENST00000454464 154 ntBASIC3.62□□□□□ -1.83
SSBP4Q9BWG4 RN7SL41P-201ENST00000476144 297 ntBASIC3.62□□□□□ -1.83
SSBP4Q9BWG4 AC083982.1-201ENST00000485679 344 ntBASIC3.62□□□□□ -1.83
SSBP4Q9BWG4 RPL36AP21-201ENST00000490372 323 ntBASIC3.62□□□□□ -1.83
SSBP4Q9BWG4 RN7SL558P-201ENST00000497468 299 ntBASIC3.62□□□□□ -1.83
SSBP4Q9BWG4 RNU6-1073P-201ENST00000517182 106 ntBASIC3.62□□□□□ -1.83
SSBP4Q9BWG4 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC3.62□□□□□ -1.83
SSBP4Q9BWG4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.62□□□□□ -1.83
SSBP4Q9BWG4 AL021707.8-201ENST00000609428 183 ntBASIC3.62□□□□□ -1.83
SSBP4Q9BWG4 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.62□□□□□ -1.83
SSBP4Q9BWG4 MIR4727-201ENST00000622232 55 ntBASIC3.62□□□□□ -1.83
SSBP4Q9BWG4 AL691477.1-201ENST00000624398 162 ntBASIC3.62□□□□□ -1.83
SSBP4Q9BWG4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.62□□□□□ -1.83
SSBP4Q9BWG4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SSBP4Q9BWG4 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SSBP4Q9BWG4 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 Y_RNA.49-201ENST00000362714 112 ntBASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 Y_RNA.634-201ENST00000364811 113 ntBASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 DYNLT3P1-201ENST00000378574 347 ntBASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 RNU6-1014P-201ENST00000383940 103 ntBASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 RNU1-77P-201ENST00000390868 162 ntBASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 SNORA26-201ENST00000391286 122 ntBASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 RNU6ATAC18P-201ENST00000408413 101 ntBASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 SNORA11.3-201ENST00000408471 128 ntBASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 MIR1183-201ENST00000408856 89 ntBASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 RN7SKP177-201ENST00000410567 355 ntBASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 RPL12P11-201ENST00000439970 501 ntBASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 AL391987.1-201ENST00000441025 200 ntBASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 AC011753.3-201ENST00000443436 406 ntBASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 APOA2-207ENST00000470459 416 ntTSL 5 BASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 AC107626.1-201ENST00000471084 183 ntBASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 SNORD46.2-201ENST00000516021 102 ntBASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 SNORA11.6-201ENST00000619030 128 ntBASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SSBP4Q9BWG4 AL159152.1-201ENST00000635019 2587 ntBASIC3.6□□□□□ -1.83
SSBP4Q9BWG4 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SSBP4Q9BWG4 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SSBP4Q9BWG4 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SSBP4Q9BWG4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SSBP4Q9BWG4 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC3.6□□□□□ -1.83
SSBP4Q9BWG4 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SSBP4Q9BWG4 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SSBP4Q9BWG4 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
SSBP4Q9BWG4 Y_RNA.91-201ENST00000363042 107 ntBASIC3.6□□□□□ -1.83
SSBP4Q9BWG4 RNU6-1305P-201ENST00000364353 104 ntBASIC3.6□□□□□ -1.83
SSBP4Q9BWG4 MIR488-201ENST00000365739 83 ntBASIC3.6□□□□□ -1.83
SSBP4Q9BWG4 RNA5SP284-201ENST00000384547 118 ntBASIC3.6□□□□□ -1.83
SSBP4Q9BWG4 Y_RNA.549-201ENST00000384657 102 ntBASIC3.6□□□□□ -1.83
SSBP4Q9BWG4 MIR450A2-201ENST00000385022 100 ntBASIC3.6□□□□□ -1.83
SSBP4Q9BWG4 RNA5SP127-201ENST00000411051 133 ntBASIC3.6□□□□□ -1.83
SSBP4Q9BWG4 AC108075.1-201ENST00000424692 529 ntBASIC3.6□□□□□ -1.83
SSBP4Q9BWG4 AL121890.1-201ENST00000435457 205 ntBASIC3.6□□□□□ -1.83
SSBP4Q9BWG4 RPL39P34-201ENST00000477141 156 ntBASIC3.6□□□□□ -1.83
SSBP4Q9BWG4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.6□□□□□ -1.83
SSBP4Q9BWG4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.6□□□□□ -1.83
SSBP4Q9BWG4 IGKV1-22-201ENST00000524313 326 ntBASIC3.6□□□□□ -1.83
SSBP4Q9BWG4 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.6□□□□□ -1.83
SSBP4Q9BWG4 AC105245.1-201ENST00000581934 244 ntBASIC3.6□□□□□ -1.83
SSBP4Q9BWG4 MIR3199-2-201ENST00000636243 86 ntBASIC3.6□□□□□ -1.83
SSBP4Q9BWG4 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SSBP4Q9BWG4 AC004944.1-201ENST00000517807 3059 ntBASIC3.6□□□□□ -1.83
SSBP4Q9BWG4 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms