Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 AC022616.3-201ENST00000523940 148 ntBASIC1.61□□□□□ -2.15
CDX2Q99626 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.61□□□□□ -2.15
CDX2Q99626 AC118273.2-201ENST00000532092 465 ntBASIC1.61□□□□□ -2.15
CDX2Q99626 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.61□□□□□ -2.15
CDX2Q99626 AC025678.1-201ENST00000567861 338 ntBASIC1.61□□□□□ -2.15
CDX2Q99626 MIR4529-201ENST00000578110 78 ntBASIC1.61□□□□□ -2.15
CDX2Q99626 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.61□□□□□ -2.15
CDX2Q99626 MIR3618-201ENST00000580330 88 ntBASIC1.61□□□□□ -2.15
CDX2Q99626 AC068790.6-201ENST00000602558 258 ntBASIC1.61□□□□□ -2.15
CDX2Q99626 DEFB131E-202ENST00000602581 683 ntBASIC1.61□□□□□ -2.15
CDX2Q99626 AC073648.5-201ENST00000603502 305 ntBASIC1.61□□□□□ -2.15
CDX2Q99626 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.61□□□□□ -2.15
CDX2Q99626 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.61□□□□□ -2.15
CDX2Q99626 AC006566.1-201ENST00000608943 513 ntBASIC1.61□□□□□ -2.15
CDX2Q99626 AL359547.2-201ENST00000615810 418 ntBASIC1.61□□□□□ -2.15
CDX2Q99626 DUXAP9-208ENST00000622815 614 ntBASIC1.61□□□□□ -2.15
CDX2Q99626 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.61□□□□□ -2.15
CDX2Q99626 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CDX2Q99626 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.6□□□□□ -2.15
CDX2Q99626 MIR412-201ENST00000362142 91 ntBASIC1.6□□□□□ -2.15
CDX2Q99626 RNU6-384P-201ENST00000364900 104 ntBASIC1.6□□□□□ -2.15
CDX2Q99626 RNU6-487P-201ENST00000365430 104 ntBASIC1.6□□□□□ -2.15
CDX2Q99626 RNU6-72P-201ENST00000384285 79 ntBASIC1.6□□□□□ -2.15
CDX2Q99626 RNU5A-2P-201ENST00000384337 116 ntBASIC1.6□□□□□ -2.15
CDX2Q99626 Y_RNA.517-201ENST00000384551 106 ntBASIC1.6□□□□□ -2.15
CDX2Q99626 RPL23AP32-201ENST00000395315 459 ntBASIC1.6□□□□□ -2.15
CDX2Q99626 AL512604.1-201ENST00000404812 257 ntBASIC1.6□□□□□ -2.15
CDX2Q99626 SUMO2P12-201ENST00000405924 140 ntBASIC1.6□□□□□ -2.15
CDX2Q99626 RNU2-66P-201ENST00000410650 161 ntBASIC1.6□□□□□ -2.15
CDX2Q99626 RNU6-248P-201ENST00000410720 107 ntBASIC1.6□□□□□ -2.15
CDX2Q99626 Y_RNA.619-201ENST00000410951 90 ntBASIC1.6□□□□□ -2.15
CDX2Q99626 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CDX2Q99626 AC114491.1-201ENST00000416095 246 ntBASIC1.6□□□□□ -2.15
CDX2Q99626 AL160275.3-201ENST00000423876 471 ntBASIC1.6□□□□□ -2.15
CDX2Q99626 AIMP1P2-201ENST00000425294 312 ntBASIC1.6□□□□□ -2.15
CDX2Q99626 AC137499.1-201ENST00000427602 88 ntBASIC1.6□□□□□ -2.15
CDX2Q99626 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.6□□□□□ -2.15
CDX2Q99626 USP9YP28-201ENST00000435142 589 ntBASIC1.6□□□□□ -2.15
CDX2Q99626 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.6□□□□□ -2.15
CDX2Q99626 AL360271.2-201ENST00000447710 161 ntBASIC1.6□□□□□ -2.15
CDX2Q99626 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.6□□□□□ -2.15
CDX2Q99626 MED28P2-201ENST00000475771 317 ntBASIC1.6□□□□□ -2.15
CDX2Q99626 AC018868.1-201ENST00000491307 315 ntBASIC1.6□□□□□ -2.15
CDX2Q99626 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.6□□□□□ -2.15
CDX2Q99626 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.6□□□□□ -2.15
CDX2Q99626 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.6□□□□□ -2.15
CDX2Q99626 SNORA48.11-201ENST00000517015 89 ntBASIC1.6□□□□□ -2.15
CDX2Q99626 RNU6-1220P-201ENST00000517126 108 ntBASIC1.6□□□□□ -2.15
CDX2Q99626 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.6□□□□□ -2.15
CDX2Q99626 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.6□□□□□ -2.15
CDX2Q99626 AC092325.1-201ENST00000566449 554 ntBASIC1.6□□□□□ -2.15
CDX2Q99626 AC080078.3-201ENST00000605407 463 ntBASIC1.6□□□□□ -2.15
CDX2Q99626 AC087752.4-201ENST00000605911 462 ntBASIC1.6□□□□□ -2.15
CDX2Q99626 AF250324.2-201ENST00000608299 610 ntBASIC1.6□□□□□ -2.15
CDX2Q99626 AC024940.5-201ENST00000622889 474 ntBASIC1.6□□□□□ -2.15
CDX2Q99626 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.6□□□□□ -2.15
CDX2Q99626 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CDX2Q99626 MTND4P4-201ENST00000439033 1366 ntBASIC1.59□□□□□ -2.15
CDX2Q99626 HAUS6P2-201ENST00000433254 2404 ntBASIC1.59□□□□□ -2.15
CDX2Q99626 AL354685.2-201ENST00000448218 1447 ntBASIC1.59□□□□□ -2.15
CDX2Q99626 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.59□□□□□ -2.15
CDX2Q99626 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
CDX2Q99626 RNU6-61P-201ENST00000365528 109 ntBASIC1.59□□□□□ -2.15
CDX2Q99626 RNU6-1032P-201ENST00000384100 107 ntBASIC1.59□□□□□ -2.15
CDX2Q99626 RNU6-622P-201ENST00000384272 103 ntBASIC1.59□□□□□ -2.15
CDX2Q99626 SNORA24.1-201ENST00000384401 135 ntBASIC1.59□□□□□ -2.15
CDX2Q99626 RNU6-843P-201ENST00000384454 104 ntBASIC1.59□□□□□ -2.15
CDX2Q99626 Y_RNA.505-201ENST00000384489 102 ntBASIC1.59□□□□□ -2.15
CDX2Q99626 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.59□□□□□ -2.15
CDX2Q99626 MTCYBP5-201ENST00000423752 1135 ntBASIC1.59□□□□□ -2.15
CDX2Q99626 AC008267.5-201ENST00000424928 265 ntBASIC1.59□□□□□ -2.15
CDX2Q99626 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.59□□□□□ -2.15
CDX2Q99626 AL627311.1-201ENST00000431514 115 ntBASIC1.59□□□□□ -2.15
CDX2Q99626 HMGN1P33-201ENST00000432945 451 ntBASIC1.59□□□□□ -2.15
CDX2Q99626 MTND6P13-201ENST00000443510 523 ntBASIC1.59□□□□□ -2.15
CDX2Q99626 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.59□□□□□ -2.15
CDX2Q99626 USP9YP12-201ENST00000450481 570 ntBASIC1.59□□□□□ -2.15
CDX2Q99626 AC112771.1-201ENST00000463581 102 ntBASIC1.59□□□□□ -2.15
CDX2Q99626 COX6CP14-201ENST00000469580 174 ntBASIC1.59□□□□□ -2.15
CDX2Q99626 AP001025.1-201ENST00000486139 332 ntBASIC1.59□□□□□ -2.15
CDX2Q99626 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.59□□□□□ -2.15
CDX2Q99626 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.59□□□□□ -2.15
CDX2Q99626 SNORA25.11-201ENST00000515935 105 ntBASIC1.59□□□□□ -2.15
CDX2Q99626 Y_RNA.672-201ENST00000516289 104 ntBASIC1.59□□□□□ -2.15
CDX2Q99626 RNU6-685P-201ENST00000517088 95 ntBASIC1.59□□□□□ -2.15
CDX2Q99626 AP003072.2-201ENST00000527756 676 ntBASIC1.59□□□□□ -2.15
CDX2Q99626 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.59□□□□□ -2.15
CDX2Q99626 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.59□□□□□ -2.15
CDX2Q99626 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.59□□□□□ -2.15
CDX2Q99626 CR383656.8-201ENST00000549046 145 ntBASIC1.59□□□□□ -2.15
CDX2Q99626 AC233702.2-202ENST00000562547 291 ntBASIC1.59□□□□□ -2.15
CDX2Q99626 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.59□□□□□ -2.15
CDX2Q99626 RN7SL793P-201ENST00000583259 296 ntBASIC1.59□□□□□ -2.15
CDX2Q99626 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CDX2Q99626 AC087683.1-201ENST00000591187 441 ntBASIC1.59□□□□□ -2.15
CDX2Q99626 AC012493.3-201ENST00000604494 112 ntBASIC1.59□□□□□ -2.15
CDX2Q99626 AC068276.1-201ENST00000605793 379 ntBASIC1.59□□□□□ -2.15
CDX2Q99626 AL139286.2-201ENST00000606838 396 ntBASIC1.59□□□□□ -2.15
CDX2Q99626 HULC.1-201ENST00000612720 240 ntBASIC1.59□□□□□ -2.15
CDX2Q99626 AC136475.10-201ENST00000620253 385 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms