Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.78□□□□□ -1.8
SHDQ96IW2 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.78□□□□□ -1.8
SHDQ96IW2 MIR3923-201ENST00000579521 83 ntBASIC3.78□□□□□ -1.8
SHDQ96IW2 MIR5695-201ENST00000579717 85 ntBASIC3.78□□□□□ -1.8
SHDQ96IW2 SNORA62.6-201ENST00000606322 83 ntBASIC3.78□□□□□ -1.8
SHDQ96IW2 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
SHDQ96IW2 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.78□□□□□ -1.8
SHDQ96IW2 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
SHDQ96IW2 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.81
SHDQ96IW2 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SHDQ96IW2 Y_RNA.222-201ENST00000364264 102 ntBASIC3.77□□□□□ -1.81
SHDQ96IW2 RNA5SP139-201ENST00000364340 117 ntBASIC3.77□□□□□ -1.81
SHDQ96IW2 Y_RNA.396-201ENST00000383949 103 ntBASIC3.77□□□□□ -1.81
SHDQ96IW2 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SHDQ96IW2 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.77□□□□□ -1.81
SHDQ96IW2 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.77□□□□□ -1.81
SHDQ96IW2 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.77□□□□□ -1.81
SHDQ96IW2 RBMY2UP-201ENST00000453474 324 ntBASIC3.77□□□□□ -1.81
SHDQ96IW2 LINC01399-202ENST00000458450 244 ntBASIC3.77□□□□□ -1.81
SHDQ96IW2 snoU13.14-201ENST00000459372 104 ntBASIC3.77□□□□□ -1.81
SHDQ96IW2 AP001324.2-201ENST00000461163 319 ntBASIC3.77□□□□□ -1.81
SHDQ96IW2 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.77□□□□□ -1.81
SHDQ96IW2 RNU2-53P-201ENST00000516257 147 ntBASIC3.77□□□□□ -1.81
SHDQ96IW2 SNORA31.16-201ENST00000516773 139 ntBASIC3.77□□□□□ -1.81
SHDQ96IW2 MIR4659A-201ENST00000580269 81 ntBASIC3.77□□□□□ -1.81
SHDQ96IW2 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.77□□□□□ -1.81
SHDQ96IW2 AC073410.2-201ENST00000603240 332 ntBASIC3.77□□□□□ -1.81
SHDQ96IW2 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.77□□□□□ -1.81
SHDQ96IW2 AC240442.1-201ENST00000616055 283 ntBASIC3.77□□□□□ -1.81
SHDQ96IW2 MIR4727-201ENST00000622232 55 ntBASIC3.77□□□□□ -1.81
SHDQ96IW2 U6.98-201ENST00000637157 84 ntBASIC3.77□□□□□ -1.81
SHDQ96IW2 AL773545.4-201ENST00000637262 310 ntBASIC3.77□□□□□ -1.81
SHDQ96IW2 AL513478.4-201ENST00000641636 310 ntBASIC3.77□□□□□ -1.81
SHDQ96IW2 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SHDQ96IW2 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.77□□□□□ -1.81
SHDQ96IW2 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SHDQ96IW2 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SHDQ96IW2 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SHDQ96IW2 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
SHDQ96IW2 Y_RNA.489-201ENST00000384410 101 ntBASIC3.76□□□□□ -1.81
SHDQ96IW2 RNU6-130P-201ENST00000411112 103 ntBASIC3.76□□□□□ -1.81
SHDQ96IW2 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.76□□□□□ -1.81
SHDQ96IW2 AC096920.1-201ENST00000423991 241 ntBASIC3.76□□□□□ -1.81
SHDQ96IW2 AC005326.1-201ENST00000429197 123 ntBASIC3.76□□□□□ -1.81
SHDQ96IW2 WARS2P1-201ENST00000429678 537 ntBASIC3.76□□□□□ -1.81
SHDQ96IW2 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.76□□□□□ -1.81
SHDQ96IW2 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.76□□□□□ -1.81
SHDQ96IW2 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.76□□□□□ -1.81
SHDQ96IW2 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.76□□□□□ -1.81
SHDQ96IW2 HMGB1P35-201ENST00000503360 598 ntBASIC3.76□□□□□ -1.81
SHDQ96IW2 AC025465.3-201ENST00000510570 311 ntBASIC3.76□□□□□ -1.81
SHDQ96IW2 RNU6-408P-201ENST00000515910 100 ntBASIC3.76□□□□□ -1.81
SHDQ96IW2 RNU2-27P-201ENST00000516185 142 ntBASIC3.76□□□□□ -1.81
SHDQ96IW2 RN7SKP49-201ENST00000516675 260 ntBASIC3.76□□□□□ -1.81
SHDQ96IW2 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.76□□□□□ -1.81
SHDQ96IW2 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SHDQ96IW2 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.76□□□□□ -1.81
SHDQ96IW2 CYP4A43P-201ENST00000568156 121 ntBASIC3.76□□□□□ -1.81
SHDQ96IW2 AL162713.1-201ENST00000604480 262 ntBASIC3.76□□□□□ -1.81
SHDQ96IW2 MIR376A1-201ENST00000616574 68 ntBASIC3.76□□□□□ -1.81
SHDQ96IW2 AP000553.6-201ENST00000641242 118 ntBASIC3.76□□□□□ -1.81
SHDQ96IW2 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SHDQ96IW2 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.76□□□□□ -1.81
SHDQ96IW2 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.76□□□□□ -1.81
SHDQ96IW2 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SHDQ96IW2 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SHDQ96IW2 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.75□□□□□ -1.81
SHDQ96IW2 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHDQ96IW2 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHDQ96IW2 CEP170P1-201ENST00000502249 4587 ntBASIC3.75□□□□□ -1.81
SHDQ96IW2 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHDQ96IW2 RNU6-806P-201ENST00000365147 105 ntBASIC3.75□□□□□ -1.81
SHDQ96IW2 Y_RNA.376-201ENST00000365638 108 ntBASIC3.75□□□□□ -1.81
SHDQ96IW2 MIR128-1-201ENST00000384921 82 ntBASIC3.75□□□□□ -1.81
SHDQ96IW2 MIR10B-201ENST00000385011 110 ntBASIC3.75□□□□□ -1.81
SHDQ96IW2 MRPL35P1-201ENST00000404272 572 ntBASIC3.75□□□□□ -1.81
SHDQ96IW2 RNU6-847P-201ENST00000411115 108 ntBASIC3.75□□□□□ -1.81
SHDQ96IW2 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.75□□□□□ -1.81
SHDQ96IW2 RPL36AP48-201ENST00000485521 314 ntBASIC3.75□□□□□ -1.81
SHDQ96IW2 RPL7P47-201ENST00000497299 556 ntBASIC3.75□□□□□ -1.81
SHDQ96IW2 RNU5F-2P-201ENST00000516066 82 ntBASIC3.75□□□□□ -1.81
SHDQ96IW2 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.75□□□□□ -1.81
SHDQ96IW2 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.75□□□□□ -1.81
SHDQ96IW2 AL356575.1-201ENST00000603008 283 ntBASIC3.75□□□□□ -1.81
SHDQ96IW2 AL078605.1-201ENST00000603529 500 ntBASIC3.75□□□□□ -1.81
SHDQ96IW2 AL034555.1-201ENST00000604816 211 ntBASIC3.75□□□□□ -1.81
SHDQ96IW2 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.75□□□□□ -1.81
SHDQ96IW2 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHDQ96IW2 MIR8057-201ENST00000620957 69 ntBASIC3.75□□□□□ -1.81
SHDQ96IW2 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SHDQ96IW2 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
SHDQ96IW2 AC093010.3-201ENST00000570269 15214 ntBASIC3.75□□□□□ -1.81
SHDQ96IW2 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.75□□□□□ -1.81
SHDQ96IW2 LINC02555-201ENST00000563933 1951 ntBASIC3.74□□□□□ -1.81
SHDQ96IW2 LINC02471-203ENST00000641941 4752 ntBASIC3.74□□□□□ -1.81
SHDQ96IW2 AC091152.2-201ENST00000591628 2569 ntBASIC3.74□□□□□ -1.81
SHDQ96IW2 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.74□□□□□ -1.81
SHDQ96IW2 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SHDQ96IW2 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.74□□□□□ -1.81
SHDQ96IW2 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms