Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 RPS4XP2-201ENST00000458402 793 ntBASIC4.7□□□□□ -1.66
HLA-CQ95604 RPL36AP21-201ENST00000490372 323 ntBASIC4.7□□□□□ -1.66
HLA-CQ95604 RNU6-772P-201ENST00000516042 105 ntBASIC4.7□□□□□ -1.66
HLA-CQ95604 Y_RNA.692-201ENST00000516627 105 ntBASIC4.7□□□□□ -1.66
HLA-CQ95604 RNU2-44P-201ENST00000516795 194 ntBASIC4.7□□□□□ -1.66
HLA-CQ95604 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-CQ95604 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-CQ95604 AL160236.1-201ENST00000556317 195 ntBASIC4.7□□□□□ -1.66
HLA-CQ95604 RN7SL703P-201ENST00000578485 302 ntBASIC4.7□□□□□ -1.66
HLA-CQ95604 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-CQ95604 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-CQ95604 AP000542.2-201ENST00000623199 6179 ntBASIC4.7□□□□□ -1.66
HLA-CQ95604 Z95331.1-201ENST00000623075 23112 ntBASIC4.7□□□□□ -1.66
HLA-CQ95604 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-CQ95604 AC007496.3-201ENST00000624987 3443 ntBASIC4.7□□□□□ -1.66
HLA-CQ95604 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-CQ95604 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-CQ95604 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-CQ95604 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-CQ95604 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-CQ95604 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-CQ95604 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HLA-CQ95604 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
HLA-CQ95604 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.69□□□□□ -1.66
HLA-CQ95604 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-CQ95604 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-CQ95604 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.69□□□□□ -1.66
HLA-CQ95604 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-CQ95604 SNORD114-19-201ENST00000363072 75 ntBASIC4.69□□□□□ -1.66
HLA-CQ95604 RNA5SP496-201ENST00000391240 109 ntBASIC4.69□□□□□ -1.66
HLA-CQ95604 RNU2-55P-201ENST00000411146 174 ntBASIC4.69□□□□□ -1.66
HLA-CQ95604 AIMP1P2-201ENST00000425294 312 ntBASIC4.69□□□□□ -1.66
HLA-CQ95604 AL445584.1-201ENST00000431451 330 ntBASIC4.69□□□□□ -1.66
HLA-CQ95604 HSPE1P21-201ENST00000438283 308 ntBASIC4.69□□□□□ -1.66
HLA-CQ95604 Y_RNA.694-201ENST00000516677 117 ntBASIC4.69□□□□□ -1.66
HLA-CQ95604 IGKV2D-19-201ENST00000523346 262 ntBASIC4.69□□□□□ -1.66
HLA-CQ95604 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.69□□□□□ -1.66
HLA-CQ95604 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.69□□□□□ -1.66
HLA-CQ95604 NDUFA5P6-201ENST00000542110 379 ntBASIC4.69□□□□□ -1.66
HLA-CQ95604 RN7SL435P-201ENST00000584418 282 ntBASIC4.69□□□□□ -1.66
HLA-CQ95604 AC012442.3-202ENST00000636742 206 ntBASIC4.69□□□□□ -1.66
HLA-CQ95604 MAPK10-320ENST00000641462 6696 ntBASIC4.69□□□□□ -1.66
HLA-CQ95604 AC092376.2-201ENST00000622621 4116 ntBASIC4.69□□□□□ -1.66
HLA-CQ95604 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
HLA-CQ95604 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.69□□□□□ -1.66
HLA-CQ95604 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-CQ95604 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-CQ95604 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.68□□□□□ -1.66
HLA-CQ95604 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.68□□□□□ -1.66
HLA-CQ95604 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-CQ95604 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-CQ95604 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-CQ95604 Y_RNA.120-201ENST00000363304 110 ntBASIC4.68□□□□□ -1.66
HLA-CQ95604 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
HLA-CQ95604 SNORA18.2-201ENST00000383865 132 ntBASIC4.68□□□□□ -1.66
HLA-CQ95604 Y_RNA.525-201ENST00000384570 113 ntBASIC4.68□□□□□ -1.66
HLA-CQ95604 RPL21P65-201ENST00000406094 466 ntBASIC4.68□□□□□ -1.66
HLA-CQ95604 SNORA36B-201ENST00000410438 131 ntBASIC4.68□□□□□ -1.66
HLA-CQ95604 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.68□□□□□ -1.66
HLA-CQ95604 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.68□□□□□ -1.66
HLA-CQ95604 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-CQ95604 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.68□□□□□ -1.66
HLA-CQ95604 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.68□□□□□ -1.66
HLA-CQ95604 MIR3609-201ENST00000582661 80 ntBASIC4.68□□□□□ -1.66
HLA-CQ95604 AC091152.3-201ENST00000604227 325 ntBASIC4.68□□□□□ -1.66
HLA-CQ95604 AP003357.1-201ENST00000604497 148 ntBASIC4.68□□□□□ -1.66
HLA-CQ95604 AC007179.3-201ENST00000604976 235 ntBASIC4.68□□□□□ -1.66
HLA-CQ95604 AL670379.3-201ENST00000605040 251 ntBASIC4.68□□□□□ -1.66
HLA-CQ95604 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.68□□□□□ -1.66
HLA-CQ95604 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.68□□□□□ -1.66
HLA-CQ95604 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-CQ95604 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.67□□□□□ -1.66
HLA-CQ95604 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-CQ95604 SNORD45.3-201ENST00000363836 72 ntBASIC4.67□□□□□ -1.66
HLA-CQ95604 RNA5SP130-201ENST00000364431 114 ntBASIC4.67□□□□□ -1.66
HLA-CQ95604 RNU6-1323P-201ENST00000384025 107 ntBASIC4.67□□□□□ -1.66
HLA-CQ95604 MIR586-201ENST00000385035 97 ntBASIC4.67□□□□□ -1.66
HLA-CQ95604 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
HLA-CQ95604 RNU7-116P-201ENST00000516940 62 ntBASIC4.67□□□□□ -1.66
HLA-CQ95604 MIR3690-201ENST00000580266 75 ntBASIC4.67□□□□□ -1.66
HLA-CQ95604 AC120024.3-201ENST00000603167 156 ntBASIC4.67□□□□□ -1.66
HLA-CQ95604 SNORA51-201ENST00000606420 132 ntBASIC4.67□□□□□ -1.66
HLA-CQ95604 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-CQ95604 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
HLA-CQ95604 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.67□□□□□ -1.66
HLA-CQ95604 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-CQ95604 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-CQ95604 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-CQ95604 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-CQ95604 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-CQ95604 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
HLA-CQ95604 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HLA-CQ95604 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
HLA-CQ95604 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.66□□□□□ -1.66
HLA-CQ95604 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.66□□□□□ -1.66
HLA-CQ95604 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-CQ95604 AL161912.2-201ENST00000565707 3007 ntBASIC4.66□□□□□ -1.66
HLA-CQ95604 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-CQ95604 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.66□□□□□ -1.66
HLA-CQ95604 U8.7-201ENST00000364940 136 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms