Protein–RNA interactions for Protein: Q92575

UBXN4, UBX domain-containing protein 4, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4Q92575 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.64□□□□□ -1.83
UBXN4Q92575 AL356274.2-201ENST00000624379 3752 ntBASIC3.64□□□□□ -1.83
UBXN4Q92575 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.64□□□□□ -1.83
UBXN4Q92575 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
UBXN4Q92575 SNORD115-32-201ENST00000364079 82 ntBASIC3.64□□□□□ -1.83
UBXN4Q92575 RNU6-541P-201ENST00000384709 110 ntBASIC3.64□□□□□ -1.83
UBXN4Q92575 MIR153-2-201ENST00000385225 87 ntBASIC3.64□□□□□ -1.83
UBXN4Q92575 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
UBXN4Q92575 RNU6-1093P-201ENST00000391194 107 ntBASIC3.64□□□□□ -1.83
UBXN4Q92575 RNU2-25P-201ENST00000411041 191 ntBASIC3.64□□□□□ -1.83
UBXN4Q92575 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.64□□□□□ -1.83
UBXN4Q92575 AC092423.1-201ENST00000430165 186 ntBASIC3.64□□□□□ -1.83
UBXN4Q92575 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.64□□□□□ -1.83
UBXN4Q92575 Z82188.1-201ENST00000436709 154 ntBASIC3.64□□□□□ -1.83
UBXN4Q92575 OR2AQ1P-201ENST00000451972 200 ntBASIC3.64□□□□□ -1.83
UBXN4Q92575 AC091153.1-201ENST00000466297 402 ntBASIC3.64□□□□□ -1.83
UBXN4Q92575 RNA5SP217-201ENST00000515959 91 ntBASIC3.64□□□□□ -1.83
UBXN4Q92575 RNU1-143P-201ENST00000516296 146 ntBASIC3.64□□□□□ -1.83
UBXN4Q92575 AC026403.1-201ENST00000518938 295 ntBASIC3.64□□□□□ -1.83
UBXN4Q92575 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.64□□□□□ -1.83
UBXN4Q92575 AC104581.2-201ENST00000572227 430 ntBASIC3.64□□□□□ -1.83
UBXN4Q92575 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
UBXN4Q92575 U1.23-201ENST00000610293 146 ntBASIC3.64□□□□□ -1.83
UBXN4Q92575 RMST_6.1-201ENST00000611980 203 ntBASIC3.64□□□□□ -1.83
UBXN4Q92575 RNU1-68P-201ENST00000615382 146 ntBASIC3.64□□□□□ -1.83
UBXN4Q92575 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.64□□□□□ -1.83
UBXN4Q92575 U1.39-201ENST00000621562 146 ntBASIC3.64□□□□□ -1.83
UBXN4Q92575 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
UBXN4Q92575 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
UBXN4Q92575 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.63□□□□□ -1.83
UBXN4Q92575 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
UBXN4Q92575 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
UBXN4Q92575 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.63□□□□□ -1.83
UBXN4Q92575 RNU6-490P-201ENST00000362985 107 ntBASIC3.63□□□□□ -1.83
UBXN4Q92575 U3.9-201ENST00000363823 204 ntBASIC3.63□□□□□ -1.83
UBXN4Q92575 Y_RNA.405-201ENST00000383979 100 ntBASIC3.63□□□□□ -1.83
UBXN4Q92575 SNORA5A-201ENST00000384111 134 ntBASIC3.63□□□□□ -1.83
UBXN4Q92575 Y_RNA.451-201ENST00000384200 100 ntBASIC3.63□□□□□ -1.83
UBXN4Q92575 Y_RNA.524-201ENST00000384564 100 ntBASIC3.63□□□□□ -1.83
UBXN4Q92575 Y_RNA.561-201ENST00000384694 100 ntBASIC3.63□□□□□ -1.83
UBXN4Q92575 SNORA12.2-201ENST00000391040 156 ntBASIC3.63□□□□□ -1.83
UBXN4Q92575 SNORA46.1-201ENST00000391069 153 ntBASIC3.63□□□□□ -1.83
UBXN4Q92575 RNA5SP171-201ENST00000391071 115 ntBASIC3.63□□□□□ -1.83
UBXN4Q92575 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.63□□□□□ -1.83
UBXN4Q92575 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.63□□□□□ -1.83
UBXN4Q92575 MTCO3P29-201ENST00000432119 779 ntBASIC3.63□□□□□ -1.83
UBXN4Q92575 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.63□□□□□ -1.83
UBXN4Q92575 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.63□□□□□ -1.83
UBXN4Q92575 HSPE1P18-201ENST00000517602 280 ntBASIC3.63□□□□□ -1.83
UBXN4Q92575 AC010928.2-201ENST00000588017 287 ntBASIC3.63□□□□□ -1.83
UBXN4Q92575 AL355297.2-201ENST00000604792 129 ntBASIC3.63□□□□□ -1.83
UBXN4Q92575 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.63□□□□□ -1.83
UBXN4Q92575 AC091903.1-201ENST00000624322 454 ntBASIC3.63□□□□□ -1.83
UBXN4Q92575 AL034408.1-202ENST00000636088 415 ntBASIC3.63□□□□□ -1.83
UBXN4Q92575 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.63□□□□□ -1.83
UBXN4Q92575 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
UBXN4Q92575 AC008264.2-201ENST00000610193 3731 ntBASIC3.62□□□□□ -1.83
UBXN4Q92575 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
UBXN4Q92575 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
UBXN4Q92575 MTCO1P12-201ENST00000414273 1543 ntBASIC3.62□□□□□ -1.83
UBXN4Q92575 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
UBXN4Q92575 RNU6-99P-201ENST00000364721 107 ntBASIC3.62□□□□□ -1.83
UBXN4Q92575 RNU6-1274P-201ENST00000384557 107 ntBASIC3.62□□□□□ -1.83
UBXN4Q92575 Y_RNA.597-201ENST00000410463 100 ntBASIC3.62□□□□□ -1.83
UBXN4Q92575 RPL32P35-201ENST00000415214 394 ntBASIC3.62□□□□□ -1.83
UBXN4Q92575 AL035423.1-201ENST00000420331 213 ntBASIC3.62□□□□□ -1.83
UBXN4Q92575 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.62□□□□□ -1.83
UBXN4Q92575 TOMM22P6-201ENST00000465035 409 ntBASIC3.62□□□□□ -1.83
UBXN4Q92575 RNU6-120P-201ENST00000516077 103 ntBASIC3.62□□□□□ -1.83
UBXN4Q92575 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.62□□□□□ -1.83
UBXN4Q92575 AC109329.2-201ENST00000519658 482 ntBASIC3.62□□□□□ -1.83
UBXN4Q92575 AC023043.3-201ENST00000593113 385 ntBASIC3.62□□□□□ -1.83
UBXN4Q92575 PCGEM1.1-201ENST00000613431 131 ntBASIC3.62□□□□□ -1.83
UBXN4Q92575 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
UBXN4Q92575 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
UBXN4Q92575 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
UBXN4Q92575 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
UBXN4Q92575 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
UBXN4Q92575 MIR625-201ENST00000385047 85 ntBASIC3.61□□□□□ -1.83
UBXN4Q92575 RNA5SP201-201ENST00000410316 124 ntBASIC3.61□□□□□ -1.83
UBXN4Q92575 RPS26P42-201ENST00000413485 326 ntBASIC3.61□□□□□ -1.83
UBXN4Q92575 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.61□□□□□ -1.83
UBXN4Q92575 AC244505.4-201ENST00000434905 287 ntBASIC3.61□□□□□ -1.83
UBXN4Q92575 RPL21P2-201ENST00000440049 481 ntBASIC3.61□□□□□ -1.83
UBXN4Q92575 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.61□□□□□ -1.83
UBXN4Q92575 SSXP5-201ENST00000443473 287 ntBASIC3.61□□□□□ -1.83
UBXN4Q92575 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.61□□□□□ -1.83
UBXN4Q92575 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.61□□□□□ -1.83
UBXN4Q92575 RN7SKP18-201ENST00000516005 275 ntBASIC3.61□□□□□ -1.83
UBXN4Q92575 RNU6-1198P-201ENST00000516904 67 ntBASIC3.61□□□□□ -1.83
UBXN4Q92575 SCARNA20.6-201ENST00000517251 106 ntBASIC3.61□□□□□ -1.83
UBXN4Q92575 SUB1P3-201ENST00000564581 315 ntBASIC3.61□□□□□ -1.83
UBXN4Q92575 MIR5701-3-201ENST00000578890 82 ntBASIC3.61□□□□□ -1.83
UBXN4Q92575 MIR3944-201ENST00000581277 108 ntBASIC3.61□□□□□ -1.83
UBXN4Q92575 MIR5701-1-201ENST00000585138 82 ntBASIC3.61□□□□□ -1.83
UBXN4Q92575 AC005520.5-201ENST00000613926 164 ntBASIC3.61□□□□□ -1.83
UBXN4Q92575 MIR5701-2-201ENST00000615634 82 ntBASIC3.61□□□□□ -1.83
UBXN4Q92575 MFSD8-233ENST00000641482 4860 ntBASIC3.61□□□□□ -1.83
UBXN4Q92575 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
UBXN4Q92575 AC093831.2-201ENST00000624393 3427 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 188.7 ms