Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SH3RF2Q8TEC5 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
SH3RF2Q8TEC5 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SH3RF2Q8TEC5 LINC02555-201ENST00000563933 1951 ntBASIC3.54□□□□□ -1.84
SH3RF2Q8TEC5 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.54□□□□□ -1.84
SH3RF2Q8TEC5 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SH3RF2Q8TEC5 RNU6-1301P-201ENST00000362724 104 ntBASIC3.54□□□□□ -1.84
SH3RF2Q8TEC5 RNU5B-2P-201ENST00000363036 113 ntBASIC3.54□□□□□ -1.84
SH3RF2Q8TEC5 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.54□□□□□ -1.84
SH3RF2Q8TEC5 RNU1-139P-201ENST00000391307 165 ntBASIC3.54□□□□□ -1.84
SH3RF2Q8TEC5 UBA52P6-201ENST00000399822 382 ntBASIC3.54□□□□□ -1.84
SH3RF2Q8TEC5 AC245291.1-201ENST00000419501 328 ntBASIC3.54□□□□□ -1.84
SH3RF2Q8TEC5 AC139712.2-201ENST00000424302 339 ntBASIC3.54□□□□□ -1.84
SH3RF2Q8TEC5 AL161651.1-201ENST00000440882 223 ntBASIC3.54□□□□□ -1.84
SH3RF2Q8TEC5 AC016700.2-201ENST00000446011 156 ntBASIC3.54□□□□□ -1.84
SH3RF2Q8TEC5 SNRPGP7-201ENST00000469016 106 ntBASIC3.54□□□□□ -1.84
SH3RF2Q8TEC5 AF186996.7-201ENST00000492781 209 ntBASIC3.54□□□□□ -1.84
SH3RF2Q8TEC5 RNU6-570P-201ENST00000517051 105 ntBASIC3.54□□□□□ -1.84
SH3RF2Q8TEC5 AC115990.1-201ENST00000526957 301 ntBASIC3.54□□□□□ -1.84
SH3RF2Q8TEC5 MIR4276-201ENST00000584832 70 ntBASIC3.54□□□□□ -1.84
SH3RF2Q8TEC5 HMGN2P15-201ENST00000585707 270 ntBASIC3.54□□□□□ -1.84
SH3RF2Q8TEC5 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.54□□□□□ -1.84
SH3RF2Q8TEC5 YPEL5P2-201ENST00000605553 359 ntBASIC3.54□□□□□ -1.84
SH3RF2Q8TEC5 AC096772.1-201ENST00000609146 564 ntBASIC3.54□□□□□ -1.84
SH3RF2Q8TEC5 AL442067.1-201ENST00000613261 223 ntBASIC3.54□□□□□ -1.84
SH3RF2Q8TEC5 MIR376A1-201ENST00000616574 68 ntBASIC3.54□□□□□ -1.84
SH3RF2Q8TEC5 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.54□□□□□ -1.84
SH3RF2Q8TEC5 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.54□□□□□ -1.84
SH3RF2Q8TEC5 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SH3RF2Q8TEC5 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 AP001148.1-201ENST00000624124 2359 ntBASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 Y_RNA.562-201ENST00000384695 113 ntBASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 RNU2-38P-201ENST00000410856 79 ntBASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 AC244670.1-201ENST00000436879 112 ntBASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 AC115115.1-201ENST00000449927 248 ntBASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 AL441985.1-201ENST00000457727 251 ntBASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 U8.22-201ENST00000459141 133 ntBASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 RPS4XP22-201ENST00000480755 780 ntBASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 RNU6-1023P-201ENST00000516137 106 ntBASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 SNORA31.6-201ENST00000516241 130 ntBASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 RNU6-1012P-201ENST00000516606 109 ntBASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 AC026333.2-201ENST00000542164 106 ntBASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 uc_338.32-201ENST00000615087 172 ntBASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 SNORA43.4-201ENST00000629559 138 ntBASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 MTND5P6-201ENST00000422338 1798 ntBASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 AL356274.2-201ENST00000624379 3752 ntBASIC3.53□□□□□ -1.84
SH3RF2Q8TEC5 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
SH3RF2Q8TEC5 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SH3RF2Q8TEC5 Z83843.1-201ENST00000604070 3685 ntBASIC3.52□□□□□ -1.85
SH3RF2Q8TEC5 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SH3RF2Q8TEC5 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.52□□□□□ -1.85
SH3RF2Q8TEC5 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.52□□□□□ -1.85
SH3RF2Q8TEC5 RNA5SP197-201ENST00000363357 119 ntBASIC3.52□□□□□ -1.85
SH3RF2Q8TEC5 SNORA20.1-201ENST00000364790 130 ntBASIC3.52□□□□□ -1.85
SH3RF2Q8TEC5 SNORD115-46-201ENST00000390982 71 ntBASIC3.52□□□□□ -1.85
SH3RF2Q8TEC5 RNU2-25P-201ENST00000411041 191 ntBASIC3.52□□□□□ -1.85
SH3RF2Q8TEC5 Z92545.1-201ENST00000411782 234 ntBASIC3.52□□□□□ -1.85
SH3RF2Q8TEC5 AC009310.1-201ENST00000414414 451 ntBASIC3.52□□□□□ -1.85
SH3RF2Q8TEC5 RPS15AP7-201ENST00000439294 405 ntBASIC3.52□□□□□ -1.85
SH3RF2Q8TEC5 RPL39P29-201ENST00000447779 157 ntBASIC3.52□□□□□ -1.85
SH3RF2Q8TEC5 RNU7-23P-201ENST00000459465 62 ntBASIC3.52□□□□□ -1.85
SH3RF2Q8TEC5 AC107626.1-201ENST00000471084 183 ntBASIC3.52□□□□□ -1.85
SH3RF2Q8TEC5 AP001025.1-201ENST00000486139 332 ntBASIC3.52□□□□□ -1.85
SH3RF2Q8TEC5 AC090897.2-201ENST00000581715 130 ntBASIC3.52□□□□□ -1.85
SH3RF2Q8TEC5 AC005000.2-201ENST00000605468 310 ntBASIC3.52□□□□□ -1.85
SH3RF2Q8TEC5 AC240442.1-201ENST00000616055 283 ntBASIC3.52□□□□□ -1.85
SH3RF2Q8TEC5 AC141273.2-201ENST00000618989 130 ntBASIC3.52□□□□□ -1.85
SH3RF2Q8TEC5 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.52□□□□□ -1.85
SH3RF2Q8TEC5 AC068647.1-201ENST00000489539 2265 ntBASIC3.52□□□□□ -1.85
SH3RF2Q8TEC5 AC002543.1-201ENST00000299783 1954 ntBASIC3.52□□□□□ -1.85
SH3RF2Q8TEC5 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.52□□□□□ -1.85
SH3RF2Q8TEC5 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SH3RF2Q8TEC5 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.51□□□□□ -1.85
SH3RF2Q8TEC5 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SH3RF2Q8TEC5 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SH3RF2Q8TEC5 MIR423-201ENST00000362201 94 ntBASIC3.51□□□□□ -1.85
SH3RF2Q8TEC5 RNU6-222P-201ENST00000362438 107 ntBASIC3.51□□□□□ -1.85
SH3RF2Q8TEC5 RNU5F-3P-201ENST00000363767 117 ntBASIC3.51□□□□□ -1.85
SH3RF2Q8TEC5 RNU6-879P-201ENST00000364328 108 ntBASIC3.51□□□□□ -1.85
SH3RF2Q8TEC5 Y_RNA.319-201ENST00000365138 92 ntBASIC3.51□□□□□ -1.85
SH3RF2Q8TEC5 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.51□□□□□ -1.85
SH3RF2Q8TEC5 RNU6-622P-201ENST00000384272 103 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms